MoG+ -Mouse Genome database with high added value-

Target CDS Information

Gene Symbol (Gene ID)

Lrwd1 (ENSMUSG00000029703)

Cross Reference

EMBL	AC087420
GO	GO:0003682, GO:0005634, GO:0005664, ...show all
goslim_goa	GO:0000228, GO:0003674, GO:0003677, ...show all
MGI_trans_name	Lrwd1-007
OTTP	OTTMUSP00000030903
OTTT	OTTMUST00000062628
UniParc	UPI00015AA3C4
Uniprot/SPTREMBL	H9KV12
Vega_transcript	Lrwd1-007, OTTMUST00000062628
Vega_translation	195762, OTTMUSP00000030903

Definition

protein_id:ENSMUSP00000121513
translation:

MAPLTPQLLLQRGRPKTDKLGKIQSLNSLALCPHPSLSGLQLLSEHLDPNLLGRLKKLRE
LDLSNNLLETLPANLGLSHLRILRCTNNQLGDVTALHQFPELEELNLEGNPFLTVSDNLK
VSFLLPKLRKVNGKDTASTCSQVENLDRELMDRVTAHWQKFIATVSPEEETDKVRADFMR
SAVRDVCYGPESLIEFTQWRVRMIAEELVASGGAQV

Chromosome

Length
Position(start - end)

2918
136133032 - 136135951

Orient to Chromosome

minus

Link

Location : (5:136133032-136135951)
/

Detail Map

name	Lrwd1 (ENSMUSG00000029703)
type	gene
link	VEGA Ensembl MGI
xref
definition	locus_tag : Lrwd1 note : leucine-rich repeats and WD repeat domain containing 1 [Source:MGI Symbol;Acc:MGI:1918985]

name	Alkbh4 (ENSMUSG00000039754)
type	gene
link	VEGA Ensembl MGI
xref
definition	locus_tag : Alkbh4 note : alkB, alkylation repair homolog 4 (E. coli) [Source:MGI Symbol;Acc:MGI:1919291]

name	Lrwd1 (ENSMUSG00000029703)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000006301

name	Lrwd1 (ENSMUSG00000029703)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000150406

name	Alkbh4 (ENSMUSG00000039754)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000136634

name	Alkbh4 (ENSMUSG00000039754)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000041100

name	Alkbh4 (ENSMUSG00000039754)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000125923

name	Alkbh4 (ENSMUSG00000039754)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000143229

name	Lrwd1 (ENSMUSG00000029703) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	CCDS:CCDS51666.1 Uniprot/SWISSPROT:Q8BUI3 RefSeq_peptide:NP_082167 RefSeq_mRNA:NM_027891.4 Vega_transcript:Lrwd1-001 Vega_transcript:OTTMUST00000062622 UCSC:uc008zzy.2 Fantom:1200011O22 Fantom:D230018C02 Fantom:D430018G14 Fantom:E430018D12 Fantom:I1C0027N22 Fantom:I730034M15 EMBL:AC087420 EMBL:AK004717 EMBL:AK051910 EMBL:AK084948 EMBL:AK153976 EMBL:AK167020 EMBL:AK167868 EMBL:BC048397 GO:GO:0003682 GO:GO:0003682 GO:GO:0005634 GO:GO:0005634 GO:GO:0005664 GO:GO:0005664 GO:GO:0005721 GO:GO:0005721 GO:GO:0005737 GO:GO:0005815 GO:GO:0006260 GO:GO:0006325 GO:GO:0006325 GO:GO:0008327 GO:GO:0008327 GO:GO:0016568 GO:GO:0031933 GO:GO:0031933 GO:GO:0035064 GO:GO:0035064 GO:GO:0071169 GO:GO:0071169 MGI_trans_name:Lrwd1-001 Vega_translation:195760 Vega_translation:OTTMUSP00000030901 goslim_goa:GO:0000228 goslim_goa:GO:0003674 goslim_goa:GO:0003677 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0005694 goslim_goa:GO:0005737 goslim_goa:GO:0005815 goslim_goa:GO:0005856 goslim_goa:GO:0006259 goslim_goa:GO:0008150 goslim_goa:GO:0009058 goslim_goa:GO:0034641 goslim_goa:GO:0042393 goslim_goa:GO:0043226 goslim_goa:GO:0043234 goslim_goa:GO:0051276 protein_id:AAH48397.1 protein_id:BAB23500.1 protein_id:BAC34810.1 protein_id:BAC39318.1 protein_id:BAE32292.1 protein_id:BAE39194.1 protein_id:BAE39884.1 OTTP:OTTMUSP00000030901 OTTT:OTTMUST00000062622 UniParc:UPI00000EAA2B
definition	note : transcript_id=ENSMUST00000006301 protein_id : ENSMUSP00000006301 translation : MAPLTPQLLLQRGRPKTDKLGKIQSLNLSGLQLLSEHLDPNLLGRLKKLRELDLSNNLLETLPANLGLSHLRILRCTNNQLGDVTALHQFPELEELNLEGNPFLTVSDNLKVSFLLPKLRKVNGKDTASTCSQVENLDRELMDRVTAHWQKFIATVSPEEETDKVRADFMRSAVRDVCYGPESLIEFTQWRVRMIAEELVASGGAQVQDAKVPVEHPQAAGASKFRAREVASKRPGKDPVTLPPSKRVRALPPAQAEGSPMGADGGQAALHLEPLHFLQCHSRNNSPKDLETQLWACAFEPAREEGHSRATSQTVATCGGEAVCVIDCQTGLVLHKYKVPGEEFFSVAWTALTVVTQAGHKKRWNMLAAAGLRGMVRLLHVRAGFCCSVIRAHKKAIATLCFSPSHETHLFTASYDKRIILWDIGVPNQDYKFQASQLLTLNCGSVPLRLCPVATCPDDFLLAGCEGGCYCWDVRLDQPQKQRVCEVNFIFSEDSKVSGQRVDGLAFVNEDVVASKGSGQGTIYLWSWSQTWAGRGRQSVLPVVILVRLQWSPTNLAYFSLSTCPGKNLVLCGDEEGSVWIYDVEHLLKEPPQATTLQPPTQILKWPQPTALGQPVTKTMINTVVANAAFTYLTALTDSNIVSIWRRC

name	Lrwd1 (ENSMUSG00000029703) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:Lrwd1-007 Vega_transcript:OTTMUST00000062628 Uniprot/SPTREMBL:H9KV12 EMBL:AC087420 GO:GO:0003682 GO:GO:0005634 GO:GO:0005664 GO:GO:0005721 GO:GO:0006325 GO:GO:0008327 GO:GO:0031933 GO:GO:0035064 GO:GO:0071169 MGI_trans_name:Lrwd1-007 Vega_translation:195762 Vega_translation:OTTMUSP00000030903 goslim_goa:GO:0000228 goslim_goa:GO:0003674 goslim_goa:GO:0003677 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0005694 goslim_goa:GO:0008150 goslim_goa:GO:0042393 goslim_goa:GO:0043226 goslim_goa:GO:0043234 goslim_goa:GO:0051276 OTTP:OTTMUSP00000030903 OTTT:OTTMUST00000062628 UniParc:UPI00015AA3C4
definition	note : transcript_id=ENSMUST00000150406 protein_id : ENSMUSP00000121513 translation : MAPLTPQLLLQRGRPKTDKLGKIQSLNSLALCPHPSLSGLQLLSEHLDPNLLGRLKKLRELDLSNNLLETLPANLGLSHLRILRCTNNQLGDVTALHQFPELEELNLEGNPFLTVSDNLKVSFLLPKLRKVNGKDTASTCSQVENLDRELMDRVTAHWQKFIATVSPEEETDKVRADFMRSAVRDVCYGPESLIEFTQWRVRMIAEELVASGGAQV

name	Alkbh4 (ENSMUSG00000039754) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Uniprot/SWISSPROT:Q9D8F1 RefSeq_mRNA_predicted:XM_006504502.2 RefSeq_peptide_predicted:XP_006504565.1 Vega_transcript:Alkbh4-002 Vega_transcript:OTTMUST00000062642 UCSC:uc009aab.1 Fantom:2010004B12 EMBL:AK008083 EMBL:BC022729 EMBL:GL456122 GO:GO:0003779 GO:GO:0005634 GO:GO:0005737 GO:GO:0006351 GO:GO:0006355 GO:GO:0006482 GO:GO:0030496 GO:GO:0031032 GO:GO:0036090 GO:GO:0046872 GO:GO:0055114 GO:GO:0070938 MGI_trans_name:Alkbh4-002 Vega_translation:195764 Vega_translation:OTTMUSP00000030914 goslim_goa:GO:0003674 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0005737 goslim_goa:GO:0006464 goslim_goa:GO:0007010 goslim_goa:GO:0007049 goslim_goa:GO:0008092 goslim_goa:GO:0008150 goslim_goa:GO:0009058 goslim_goa:GO:0034641 goslim_goa:GO:0043167 goslim_goa:GO:0043226 goslim_goa:GO:0051301 protein_id:AAH22729.1 protein_id:BAB25449.1 OTTP:OTTMUSP00000030914 OTTT:OTTMUST00000062642 UniParc:UPI00000250AE
definition	note : transcript_id=ENSMUST00000041100 protein_id : ENSMUSP00000040403 translation : MAAAAEVSLLQECGCKGIRTCLICERQRHRDPPWQICLQKKCCFLYCPDTGWAAGAEGSDLEGWAFPFPGVTLIQDFVTPEEEAEMVRLMDCDPWKLSQSGRKKQDYGPKVNFRKQKLKMAGFQGLPGFSQKVVQRMGLYPGLEDFQPVEQCNLDYSPERGSAIDPHLDDAWLWGERLVSLNLLSATVVSMSPEAPGSLLLCSAPSVRPDAFEDSLVAPSRSVPCQEVEVAITVPRRSLLVLTGAARHQWTHAIHRRHIKARRVCATFRELSSEFLPGGKQQELGQELLQAALSFQGRPV

name	Alkbh4 (ENSMUSG00000039754) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:Alkbh4-004 Vega_transcript:OTTMUST00000062644 Uniprot/SPTREMBL:D6RFB6 EMBL:AC087420 GO:GO:0003779 GO:GO:0006482 GO:GO:0030496 GO:GO:0031032 GO:GO:0036090 GO:GO:0070938 MGI_trans_name:Alkbh4-004 Vega_translation:195765 Vega_translation:OTTMUSP00000030916 goslim_goa:GO:0003674 goslim_goa:GO:0005575 goslim_goa:GO:0005623 goslim_goa:GO:0006464 goslim_goa:GO:0007010 goslim_goa:GO:0007049 goslim_goa:GO:0008092 goslim_goa:GO:0008150 goslim_goa:GO:0051301 OTTP:OTTMUSP00000030916 OTTT:OTTMUST00000062644 UniParc:UPI00015AA3C7
definition	note : transcript_id=ENSMUST00000125923 protein_id : ENSMUSP00000117167 translation : MAAAAEVSLLQECGCKGIRTCLICERQRHRDPPWQICLQVRTRKRVIARKSIHLNGKLRPSLPVKQPRTKASR

name	Alkbh4 (ENSMUSG00000039754) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:Alkbh4-005 Vega_transcript:OTTMUST00000062645 Uniprot/SPTREMBL:F7B4H2 UCSC:uc009aab.1 EMBL:AC087420 GO:GO:0003779 GO:GO:0006482 GO:GO:0030496 GO:GO:0031032 GO:GO:0036090 GO:GO:0070938 MGI_trans_name:Alkbh4-005 Vega_translation:195766 Vega_translation:OTTMUSP00000030917 goslim_goa:GO:0003674 goslim_goa:GO:0005575 goslim_goa:GO:0005623 goslim_goa:GO:0006464 goslim_goa:GO:0007010 goslim_goa:GO:0007049 goslim_goa:GO:0008092 goslim_goa:GO:0008150 goslim_goa:GO:0051301 OTTP:OTTMUSP00000030917 OTTT:OTTMUST00000062645 UniParc:UPI00015AA3C5
definition	note : transcript_id=ENSMUST00000143229 protein_id : ENSMUSP00000116402 translation : LLQECGCKGIRTCLICERQRHRDPPWQICLQKKCCFLYCPDTGWAAGAEGSDLEGWAFPFPGVTLIQDFVTPEEEAEMVRLMDCDPWKLSQSGRKKQVRWPELSRGLWP

name
type	misc_feature
link
xref
definition	note : contig AC087420.4 4535..232462(1)

name	Lrwd1 (ENSMUSG00000029703)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000062625 Vega_transcript:OTTMUST00000062625 MGI_trans_name:Lrwd1-004 OTTT:OTTMUST00000062625
definition	note : retained_intron note : transcript_id=ENSMUST00000132976

name	Lrwd1 (ENSMUSG00000029703)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000062624 Vega_transcript:OTTMUST00000062624 MGI_trans_name:Lrwd1-003 OTTT:OTTMUST00000062624
definition	note : retained_intron note : transcript_id=ENSMUST00000148475

name	Lrwd1 (ENSMUSG00000029703)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000134906 Vega_transcript:OTTMUST00000134906 MGI_trans_name:Lrwd1-009 OTTT:OTTMUST00000134906
definition	note : retained_intron note : transcript_id=ENSMUST00000199786

name	Lrwd1 (ENSMUSG00000029703)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000062623 Vega_transcript:OTTMUST00000062623 MGI_trans_name:Lrwd1-002 OTTT:OTTMUST00000062623
definition	note : retained_intron note : transcript_id=ENSMUST00000139908

name	Lrwd1 (ENSMUSG00000029703)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000062629 Vega_transcript:OTTMUST00000062629 MGI_trans_name:Lrwd1-008 OTTT:OTTMUST00000062629
definition	note : retained_intron note : transcript_id=ENSMUST00000149673

Polymorphisms
Exon
Sequence

Polymorphisms Report

Target Strain	MSMv4 JF1v3 KJRv1 SWNv1 CHDv1 NJLv1 BLG2v1 HMIv1 BFMv1 PGN2v1

Gene Symbol (Gene ID)	Lrwd1 (ENSMUSG00000029703)
Transcript ID	ENSMUST00000150406

Reports
substitution
cSNPs	6
Insertion	6
Deletion	12
SNPs	+1kb 136136076(c.-125A>G), 136136141(c.-190C>T), 136136175(c.-224C>T), 136136177(c.-226C>A), 136136209(c.-258T>G), 136136401(c.-450A>C), 136136491(c.-540T>C), 136136498(c.-547A>G), 136136543(c.-592G>A), 136136572(c.-621T>G), 136136957(c.-1006T>A), 136137047(c.-1096C>T), 136137391(c.-1440G>A), 136137480(c.-1529G>A), 136137509(c.-1558A>G), 136137554(c.-1603C>T), 136137978(c.-2027C>T), 136138766(c.-2815A>T), 136138911(c.-2960C>T), 136139054(c.-3103G>A), 136139081(c.-3130T>C), 136139171(c.-3220G>A), 136139809(c.-3858A>G), 136140238(c.-4287A>T), 136140358(c.-4407G>A), 136140541(c.-4590C>T), 136140561(c.-4610G>A), 136140562(c.-4611T>C), 136140578(c.-4627A>G), 136140586(c.-4635C>T), 136140676(c.-4725C>T), 5'UTR CDS 136133383(c.522G>A), 136133408(c.497G>A), 136134541(c.300A>G), 136134544(c.297C>T), 136134568(c.273G>A), 136135925(c.27C>T), 3'UTR INTRON 136133107(c.601-28T>C), 136133214(c.600+91G>A), 136133300(c.600+5A>G), 136133461(c.460-16G>C), 136133494(c.460-49C>A), 136133581(c.460-136C>A), 136133612(c.460-167T>C), 136133801(c.459+133T>G), 136133874(c.459+60C>T), 136133879(c.459+55T>G), 136134238(c.343-188G>C), 136134397(c.342+102G>A), 136134410(c.342+89T>C), 136134492(c.342+7G>A), 136134768(c.81-8T>C), 136134870(c.81-110A>G), 136134894(c.81-134C>T), 136134951(c.81-191T>C), 136135170(c.81-410C>T), 136135217(c.81-457A>C), 136135666(c.80+206T>C), -1kb 136128038(c.4994C>T), 136128296(c.4736T>C), 136128370(c.4662T>C), 136128433(c.4599C>T), 136128459(c.4573A>G), 136128534(c.4498G>C), 136128579(c.4453T>C), 136128721(c.4311A>G), 136128847(c.4185T>G), 136128917(c.4115G>A), 136128921(c.4111G>A), 136129013(c.4019C>G), 136129409(c.3623T>C), 136129442(c.3590A>G), 136129595(c.3437T>G), 136129654(c.3378C>T), 136129927(c.3105G>A), 136129938(c.3094A>G), 136129980(c.3052T>C), 136130012(c.3020G>A), 136130145(c.2887A>G), 136130626(c.2406T>G), 136130637(c.2395T>C), 136130781(c.2251A>G), 136131292(c.1740A>G), 136131413(c.1619G>A), 136131666(c.1366A>T), 136131667(c.1365T>A), 136131728(c.1304C>T), 136131881(c.1151T>C), 136132015(c.1017A>G), 136132104(c.928T>C), 136132255(c.777G>C), 136132289(c.743A>G), 136132298(c.734C>T), 136132544(c.488C>T), 136132587(c.445C>T), 136132823(c.209A>T), 136132945(c.87A>G), 136132956(c.76A>G), 136133024(c.*8C>A),
Insertions	+1kb 136136179 (c.-231_-229dupGCC), 136136454 (c.-504_-503insGGAAGC), 136138427 (c.-2477_-2476insG), 5'UTR CDS 3'UTR INTRON 136134120 (c.343-71_343-70insC), 136134217 (c.343-168_343-167insAAA), -1kb 136128567 (c.4464_4465insT),
Deletions	+1kb 136136533 (c.-583delC), 136136635 (c.-704_-685delACCACTGCCCCCCACCCCCA), 136136949 (c.-999delC), 136137268 (c.-1325_-1318delTTCATTCA), 136137391 (c.-1448_-1441delTGTCTGTC), 136138048 (c.-2098delT), 136138525 (c.-2578_-2575delAACC), 136138530 (c.-2584_-2580delACAAC), 136138761 (c.-2814_-2811delGCAA), 5'UTR CDS 3'UTR INTRON 136135598 (c.80+273delA), -1kb 136131308 (c.1721_1723delGGG), 136131687 (c.1341_1344delAAAA),
coding sequence substitutions
premature termination by the nucleotide substitution	0
synonymous num	5
non-synonymous num	1
synonymous substitutions	136133383 (p.Val174Val), 136134541 (p.Pro100Pro), 136134544 (p.Phe99Phe), 136134568 (p.Gly91Gly), 136135925 (p.Leu9Leu),
non-synonymous substitutions	136133408 (p.Ser166Asn),
B6 transcript (ENSMUST00000150406)	MAPLTPQLLLQRGRPKTDKLGKIQSLNSLALCPHPSLSGLQLLSEHLDPNLLGRLKKLRE LDLSNNLLETLPANLGLSHLRILRCTNNQLGDVTALHQFPELEELNLEGNPFLTVSDNLK VSFLLPKLRKVNGKDTASTCSQVENLDRELMDRVTAHWQKFIATVSPEEETDKVRADFMR SAVRDVCYGPESLIEFTQWRVRMIAEELVASGGAQV
MSMv4 transcript	MAPLTPQLLLQRGRPKTDKLGKIQSLNSLALCPHPSLSGLQLLSEHLDPNLLGRLKKLRE LDLSNNLLETLPANLGLSHLRILRCTNNQLGDVTALHQFPELEELNLEGNPFLTVSDNLK VSFLLPKLRKVNGKDTASTCSQVENLDRELMDRVTAHWQKFIATVNPEEETDKVRADFMR SAVRDVCYGPESLIEFTQWRVRMIAEELVASGGAQV
homology	99.54 (216 / 216)

Exon Detail Report

Target Strain	MSMv4 JF1v3 KJRv1 SWNv1 CHDv1 NJLv1 BLG2v1 HMIv1 BFMv1 PGN2v1

Gene Symbol (Gene ID)	Lrwd1 (ENSMUSG00000029703)
Transcript ID	ENSMUST00000150406


..........CTGTAAAGCTGATTCATACAGGTTTGTTTTCCCAAAAAAATTTCCCCCAA
ATCAAAGCCTGTTTTGGAGACAGGTTTCTCTGTAGTGTAGTCCTGGCTGTCCTGGAACTC
ACTCTGTAGACCAGGCTGGCCTCGAACTCGGAATTCCACCTGCCTCTTGTCTCCCGAGTG
CTGGGATTAAAGGCATGCGCCACCACTGCCCGGCTGCCTGTGCTGTCTTAAGTCGCTCAT
TCCCTGTCTAATACAGGCGGCCTAGTGTTCAGCACTCCCTACCATTTCCATGCAGTCTCC
CTTGTGCTCCGGAAGCTCACTCAAAACCAGACCCGTTCAGTCCAAGTTATTTACCACTGC
CCCCCACCCCCACCCCTCACCCCCCAAAGTCACAGAGATGATGTGTGACAGCCGCTTCCC
TACTGCCAAGGTAACGCCTAAAACCTGCTGGGCGGCTGAGGTCCGTTCTCCAGCCTCTCT
GCCTTTCAAATGCAGAGATCTCGGCGTGCGCCAGCACTTCCCCGCCCTTCCATTAATCAG
CCGATGGCACTTGGTCCACCTTTTGGGTTTTGTGAATATTGAAGATATAAGCGCTCCAAA
CAACTCCCCTACCGCGAGGCTTTGGTCCTTGGCTGTTTTACAGGCAAGCTGGGCCTTAGT
TTCCCATTAAGATGAATAGATTTTCTGGCTATGACTCTTTTCCTAGTCCGTACCTGAAGG
CAGATCTGCCAGGGCGGGTCCCTGTGGCGTTGTCTCTCGCAGATAAGACAGGTCCGGATG
CCCTTACAGCCGCACTCCGGCAAAAGAGAAACTTCAGCCGCCGCCGCCATCGCGTCCTCC
GATCAGTTAAGAGCGCAGGCGCGAGATGCAGGGGCCGCTGGGAGTTGTAGTCATCGCAGA
AGCAGGAGGTGGGGCGTAAGGCTGGCGTTCTGCTTCCTTCCGGTCGCAACGGACTCGCAA
AGGGTTTGTTGTGCGCCACCTCCTGGGCTCCCCGGCAGCGGGCCTTAGCG
ACCGGACTTCGTGGAGGCGCGGGTTCGGTTGAGCCCTCGGCCACCCATGGCTCCTCTCACGCCGCAACTGCTTCTGCAACGTGGGCGACCCAAGACGGATAAGCTGGGGAAGATTCAGAGTTTGAA
GTAAGAGCATGTGGGGTTGAAGCGG..........GGGAGGGTCTGGCCCGCCCCCTCAG
CTCTCTTGCTCTCTGCCCTCACCCCAGTCTGTCGGGGCTGCAGCTGCTCTCAGAGCACTTGGATCCCAATCTCCTGGGGCGCCTGAAGAAGCTGAGGGAACTTGACCTCTCTAACAACTTGCTGGAGACGCTGCCTGCTAACCTGGGCCTGTCCCATCTGCGCATCCTTCGCTGTACCAACAACCAGCTCGGAGATGTCACTGCCTTGCACCAGTTTCCGGAACTTGAGGAGCTCAATCTGGAAGGCAACCCCTTCCTGACG
GTGAGAAGGACCAGGACTCTGTGGG..........TTTCTGTTATCTCTTCTTCCGTTAG
GTCAGTGACAACCTCAAAGTCTCCTTTCTCCTGCCCAAGCTTCGTAAGGTGAATGGCAAGGACACGGCCTCCACCTGCTCACAGGTGGAGAATCTAGATCGGGAGCTGATGGACAGG
GTAAGGATGATGGCGTGGGGGTGGG..........ACGGTTCTGCTCTTTCTTACCGCAG
GTCACAGCTCACTGGCAGAAGTTCATAGCCACTGTGAACCCTGAGGAGGAAACTGACAAGGTACGGGCTGATTTCATGAGGTCTGCAGTCAGGGATGTGTGTTACGGCCCTGAGTCGCTCATCGAGTTCACGCAGTGGCGG
GTACGTCATGGAGACTGGGGTTGGG..........CTGCTGATGGCCTGGCCTCACCCAG
GTGCGGATGATCGCCGAGGAACTGGTGGCCTCAGGTGGGGCCCAGGTG
CAAGACGATAAGGTCCCCGTGGAGCATCCCCAGGCTGCAGGTGCCTCCAAGTTCAGGGTG
AGCGGTTCCATCCACGTGGCTGGGAGGGCCCTGGGTCTTTCTGCACTAGAACACAGATGG
CCCTCTGCATAAACTCAGGTGATGCCCAAGTAGAACAGTCAGCCTTCCCTTGCCGTGACC
GCATACATGAGGTCATCGATTTACAAGGTAGAAAGGTTGGTTTGGGTTTACAGTTTTACT
CCATAGTTCCTTGGTTCTAAGGTTGTTCATATTGTGTCTCTTATGGGGATGGGCTGTGAA
TCTTGTGGCCATCAAGAACCAAAGAGAGAAAGGGGAGCCAGTGTCCCAGTGCCCCCTTCA
AGGGATGCCTGAGTCTCCTCACCTTCACTGTACTCCAGAGTAGCCCCATAGTCTGCTAAC
CCAGCCTTTTAACCTTTAGGCTCTTGGAGAACATTTTAAGTGCCCAGCCCTAACACGGAG
CAAGGTCTCCCTGTGGCCCAGTTCTTGCTTTCCGTGCCTTTGAGAGGGTGTATAGTTCAG
TGTGTAGTCAGGGGAGGGACCTTAGGGCATGGTCACATGGTTAAAGTCTCCTTCCTTTCA
CAGGCCAGAGAGGTGGCTTCAAAACGGCCAGGTAAAGACCCAGTCACCCTTCCTCCCAGC
AAGCGAGTGCGTGCTCTCCCACCTGCTCAGGCTGAGGGCAGTCCTATGGGTGCTGATGGA
GGGCAGGTAAGCTTCCCACGAGGCAGGGGGAGCAGGCCAGAGGGAGCAGGCCAGGGCGCA
ACCGTGACCACCTGTGTCCCCACAGGCTGCCCTACACCTGGAACCCCTGCACTTCCTGCA
GTGTCATAGCAGAAACAACAGCCCAAAGGACCTGGAGACCCAGCTGTGGGCCTGTGCCTT
TGAGCCGGCCCGGGAGGAGGGTACGTGCTGGGCCAACGGGCAGTGGGAGGTTTGGGTCAT
AGGTTGGTGCTCAGCAGGAGATGAGAAATGGAAAGATACC..........

No.	Exon / Intron	Start	End	Start Phase	End Phase	Length	Sequence
	5' upstream sequence						..........CTGTAAAGCTGATTCATACAGGTTTGTTTTCCCAAAAAAATTTCCCCCAA ATCAAAGCCTGTTTTGGAGACAGGTTTCTCTGTAGTGTAGTCCTGGCTGTCCTGGAACTC ACTCTGTAGACCAGGCTGGCCTCGAACTCGGAATTCCACCTGCCTCTTGTCTCCCGAGTG CTGGGATTAAAGGCATGCGCCACCACTGCCCGGCTGCCTGTGCTGTCTTAAGTCGCTCAT TCCCTGTCTAATACAGGCGGCCTAGTGTTCAGCACTCCCTACCATTTCCATGCAGTCTCC CTTGTGCTCCGGAAGCTCACTCAAAACCAGACCCGTTCAGTCCAAGTTATTTACCACTGC CCCCCACCCCCACCCCTCACCCCCCAAAGTCACAGAGATGATGTGTGACAGCCGCTTCCC TACTGCCAAGGTAACGCCTAAAACCTGCTGGGCGGCTGAGGTCCGTTCTCCAGCCTCTCT GCCTTTCAAATGCAGAGATCTCGGCGTGCGCCAGCACTTCCCCGCCCTTCCATTAATCAG CCGATGGCACTTGGTCCACCTTTTGGGTTTTGTGAATATTGAAGATATAAGCGCTCCAAA CAACTCCCCTACCGCGAGGCTTTGGTCCTTGGCTGTTTTACAGGCAAGCTGGGCCTTAGT TTCCCATTAAGATGAATAGATTTTCTGGCTATGACTCTTTTCCTAGTCCGTACCTGAAGG CAGATCTGCCAGGGCGGGTCCCTGTGGCGTTGTCTCTCGCAGATAAGACAGGTCCGGATG CCCTTACAGCCGCACTCCGGCAAAAGAGAAACTTCAGCCGCCGCCGCCATCGCGTCCTCC GATCAGTTAAGAGCGCAGGCGCGAGATGCAGGGGCCGCTGGGAGTTGTAGTCATCGCAGA AGCAGGAGGTGGGGCGTAAGGCTGGCGTTCTGCTTCCTTCCGGTCGCAACGGACTCGCAA AGGGTTTGTTGTGCGCCACCTCCTGGGCTCCCCGGCAGCGGGCCTTAGCG
1	EXON 1	136135872	136135997	-	2	126	ACCGGACTTCGTGGAGGCGCGGGTTCGGTTGAGCCCTCGGCCACCCATGGCTCCTCTCAC GCCGCAACTGCTTCTGCAACGTGGGCGACCCAAGACGGATAAGCTGGGGAAGATTCAGAG TTTGAA
	INTRON 1 - 2	136134761	136135871			1111	GTAAGAGCATGTGGGGTTGAAGCGG..........GGGAGGGTCTGGCCCGCCCCCTCAG
2	EXON 2	136134499	136134760	2	0	262	CTCTCTTGCTCTCTGCCCTCACCCCAGTCTGTCGGGGCTGCAGCTGCTCTCAGAGCACTT GGATCCCAATCTCCTGGGGCGCCTGAAGAAGCTGAGGGAACTTGACCTCTCTAACAACTT GCTGGAGACGCTGCCTGCTAACCTGGGCCTGTCCCATCTGCGCATCCTTCGCTGTACCAA CAACCAGCTCGGAGATGTCACTGCCTTGCACCAGTTTCCGGAACTTGAGGAGCTCAATCT GGAAGGCAACCCCTTCCTGACG
	INTRON 2 - 3	136134051	136134498			448	GTGAGAAGGACCAGGACTCTGTGGG..........TTTCTGTTATCTCTTCTTCCGTTAG
3	EXON 3	136133934	136134050	0	0	117	GTCAGTGACAACCTCAAAGTCTCCTTTCTCCTGCCCAAGCTTCGTAAGGTGAATGGCAAG GACACGGCCTCCACCTGCTCACAGGTGGAGAATCTAGATCGGGAGCTGATGGACAGG
	INTRON 3 - 4	136133446	136133933			488	GTAAGGATGATGGCGTGGGGGTGGG..........ACGGTTCTGCTCTTTCTTACCGCAG
4	EXON 4	136133305	136133445	0	0	141	GTCACAGCTCACTGGCAGAAGTTCATAGCCACTGTGAACCCTGAGGAGGAAACTGACAAG GTACGGGCTGATTTCATGAGGTCTGCAGTCAGGGATGTGTGTTACGGCCCTGAGTCGCTC ATCGAGTTCACGCAGTGGCGG
	INTRON 4 - 5	136133080	136133304			225	GTACGTCATGGAGACTGGGGTTGGG..........CTGCTGATGGCCTGGCCTCACCCAG
5	EXON 5	136133032	136133079	0	-	48	GTGCGGATGATCGCCGAGGAACTGGTGGCCTCAGGTGGGGCCCAGGTG
	3' upstream sequence						CAAGACGATAAGGTCCCCGTGGAGCATCCCCAGGCTGCAGGTGCCTCCAAGTTCAGGGTG AGCGGTTCCATCCACGTGGCTGGGAGGGCCCTGGGTCTTTCTGCACTAGAACACAGATGG CCCTCTGCATAAACTCAGGTGATGCCCAAGTAGAACAGTCAGCCTTCCCTTGCCGTGACC GCATACATGAGGTCATCGATTTACAAGGTAGAAAGGTTGGTTTGGGTTTACAGTTTTACT CCATAGTTCCTTGGTTCTAAGGTTGTTCATATTGTGTCTCTTATGGGGATGGGCTGTGAA TCTTGTGGCCATCAAGAACCAAAGAGAGAAAGGGGAGCCAGTGTCCCAGTGCCCCCTTCA AGGGATGCCTGAGTCTCCTCACCTTCACTGTACTCCAGAGTAGCCCCATAGTCTGCTAAC CCAGCCTTTTAACCTTTAGGCTCTTGGAGAACATTTTAAGTGCCCAGCCCTAACACGGAG CAAGGTCTCCCTGTGGCCCAGTTCTTGCTTTCCGTGCCTTTGAGAGGGTGTATAGTTCAG TGTGTAGTCAGGGGAGGGACCTTAGGGCATGGTCACATGGTTAAAGTCTCCTTCCTTTCA CAGGCCAGAGAGGTGGCTTCAAAACGGCCAGGTAAAGACCCAGTCACCCTTCCTCCCAGC AAGCGAGTGCGTGCTCTCCCACCTGCTCAGGCTGAGGGCAGTCCTATGGGTGCTGATGGA GGGCAGGTAAGCTTCCCACGAGGCAGGGGGAGCAGGCCAGAGGGAGCAGGCCAGGGCGCA ACCGTGACCACCTGTGTCCCCACAGGCTGCCCTACACCTGGAACCCCTGCACTTCCTGCA GTGTCATAGCAGAAACAACAGCCCAAAGGACCTGGAGACCCAGCTGTGGGCCTGTGCCTT TGAGCCGGCCCGGGAGGAGGGTACGTGCTGGGCCAACGGGCAGTGGGAGGTTTGGGTCAT AGGTTGGTGCTCAGCAGGAGATGAGAAATGGAAAGATACC..........

Sequence Detail Report

Gene Symbol (Gene ID)	Lrwd1 (ENSMUSG00000029703)
Transcript ID	ENSMUST00000150406

		SNP Information
Strain :
Sequence Retrieve :
Exon translate : CDS Start ( 1 ) - End ( 216 ) -
Strand :	forward reverse
Show sequence :	nucleotide amino acid
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