| Reports |
|---|
| substitution |
|---|
| cSNPs | 2 |
|---|
| Insertion | 17 |
|---|
| Deletion | 15 |
|---|
| SNPs |
+1kb
- 5'UTR
- CDS
- 3'UTR
- INTRON
5132136(c.*85-96A>G),
5132357(c.*85-317T>C),
5132366(c.*85-326T>C),
5132664(c.*85-624C>T),
5132674(c.*85-634C>T),
5132836(c.*85-796G>A),
5132837(c.*85-797T>C),
5132842(c.*85-802A>G),
5132861(c.*85-821G>A),
5132949(c.*85-909T>C),
5133008(c.*85-968A>G),
5133009(c.*85-969C>G),
5133016(c.*85-976C>G),
5133033(c.*85-993G>A),
5133038(c.*85-998C>T),
5133243(c.*84+831T>G),
5133418(c.*84+656A>G),
5133450(c.*84+624G>A),
5133532(c.*84+542A>G),
5133619(c.*84+455C>T),
5133697(c.*84+377A>G),
5133800(c.*84+274A>G),
5133875(c.*84+199A>T),
5133900(c.*84+174G>A),
5134491(c.398-81T>G),
5134575(c.398-165G>A),
5135043(c.397+311C>G),
5135289(c.397+65A>G),
5135343(c.397+11C>T),
5136454(c.320-1023T>C),
5136503(c.320-1072C>T),
5136513(c.320-1082A>G),
5136640(c.320-1209G>A),
5136700(c.320-1269C>T),
5136728(c.320-1297C>T),
5136773(c.320-1342C>A),
5136774(c.320-1343C>A),
5136871(c.320-1440A>G),
5136984(c.320-1553G>A),
5137228(c.320-1797G>T),
5137250(c.320-1819G>A),
5137471(c.320-2040A>G),
5137487(c.320-2056T>A),
5137496(c.320-2065T>C),
5137513(c.320-2082G>A),
5137545(c.320-2114A>G),
5137559(c.320-2128A>G),
5137598(c.320-2167G>C),
5138813(c.320-3382T>A),
5138996(c.320-3565T>G),
5139320(c.320-3889G>A),
5139337(c.320-3906T>C),
5139358(c.320-3927T>C),
5139413(c.320-3982C>T),
5139490(c.320-4059A>T),
5139656(c.319+4171G>A),
5139695(c.319+4132G>A),
5139713(c.319+4114T>C),
5139783(c.319+4044C>T),
5139840(c.319+3987A>G),
5140302(c.319+3525T>C),
5140405(c.319+3422G>T),
5140500(c.319+3327T>C),
5140600(c.319+3227A>G),
5140658(c.319+3169C>T),
5140661(c.319+3166A>G),
5140688(c.319+3139C>G),
5140716(c.319+3111A>T),
5140749(c.319+3078T>C),
5140762(c.319+3065C>G),
5140933(c.319+2894G>A),
5141193(c.319+2634G>A),
5141232(c.319+2595A>C),
5141254(c.319+2573A>C),
5141305(c.319+2522T>C),
5141318(c.319+2509G>A),
5141398(c.319+2429C>T),
5141415(c.319+2412G>A),
5141564(c.319+2263T>G),
5141632(c.319+2195G>A),
5141645(c.319+2182A>G),
5141744(c.319+2083G>C),
5141824(c.319+2003C>T),
5141843(c.319+1984G>A),
5141847(c.319+1980T>C),
5141851(c.319+1976G>A),
5141852(c.319+1975A>G),
5141861(c.319+1966G>A),
5141926(c.319+1901A>T),
5141943(c.319+1884C>G),
5142473(c.319+1354A>G),
5142474(c.319+1353C>T),
5142680(c.319+1147G>A),
5142698(c.319+1129C>T),
5142901(c.319+926G>T),
5142932(c.319+895C>T),
5142983(c.319+844C>T),
5143187(c.319+640C>G),
5143215(c.319+612A>G),
5143282(c.319+545G>A),
5143296(c.319+531C>A),
5143499(c.319+328A>G),
5143757(c.319+70C>T),
5143813(c.319+14C>T),
5143988(c.216-58C>T),
5144007(c.216-77A>G),
5144044(c.216-114C>G),
5144166(c.215+129C>T),
5144271(c.215+24G>A),
5144272(c.215+23T>C),
5144634(c.102-226C>T),
5144707(c.102-299C>T),
5144722(c.102-314T>C),
5144761(c.102-353C>T),
5145715(c.102-1307A>G),
5145759(c.102-1351A>G),
5145775(c.102-1367C>A),
5145960(c.102-1552C>G),
5146131(c.102-1723A>G),
5146221(c.102-1813G>T),
5146289(c.102-1881C>T),
5147500(c.102-3092C>T),
5147564(c.102-3156C>T),
5147711(c.102-3303G>A),
5147792(c.102-3384C>G),
5149474(c.101+2648A>G),
5149556(c.101+2566C>T),
5149831(c.101+2291G>A),
5150610(c.101+1512C>A),
5150808(c.101+1314T>C),
-
-1kb
5128237(c.*5921A>C),
5128884(c.*5274T>G),
5128962(c.*5196A>G),
5129172(c.*4986A>G),
5129204(c.*4954C>A),
5129381(c.*4777T>C),
5129456(c.*4702T>C),
5129783(c.*4375T>G),
5129790(c.*4368T>C),
5129792(c.*4366T>C),
5129794(c.*4364T>C),
5129805(c.*4353T>C),
5129822(c.*4336T>C),
5129949(c.*4209C>T),
5130147(c.*4011T>C),
5130157(c.*4001T>G),
5130226(c.*3932C>A),
5130311(c.*3847A>G),
5130357(c.*3801T>A),
5130360(c.*3798T>G),
5130361(c.*3797C>T),
5130454(c.*3704T>C),
5130455(c.*3703A>T),
5130594(c.*3564C>T),
5130677(c.*3481C>T),
5130811(c.*3347T>C),
5131005(c.*3153G>A),
5131008(c.*3150C>T),
5131019(c.*3139G>A),
5131272(c.*2886G>A),
5131298(c.*2860G>A),
5131336(c.*2822A>T),
5131623(c.*2535A>T),
5131645(c.*2513G>A),
5131653(c.*2505G>A),
5131664(c.*2494G>A),
5131677(c.*2481T>C),
5131727(c.*2431A>G),
5131774(c.*2384A>G),
5131796(c.*2362A>G),
|
|---|
| Insertions |
-
+1kb
- 5'UTR
- CDS
- 3'UTR
- INTRON
5132190 (c.*85-151dupT),
5135884 (c.320-454_320-453insA),
5136457 (c.320-1027dupA),
5137001 (c.320-1571dupA),
5138571 (c.320-3141_320-3140insTG),
5139920 (c.319+3906_319+3907insCCC),
5140976 (c.319+2850dupC),
5144599 (c.102-192_102-191insCCCCAGC),
5147681 (c.102-3274_102-3273insCCACA),
5148431 (c.101+3690_101+3691insCA),
5151538 (c.101+582_101+583dupTT),
-
-1kb
|
|---|
| Deletions |
-
+1kb
- 5'UTR
- CDS
- 3'UTR
- INTRON
5132445 (c.*85-407_*85-406delCA),
5132649 (c.*85-613_*85-610delATAC),
5132717 (c.*85-679_*85-678delGC),
5132794 (c.*85-755delC),
5132796 (c.*85-757delC),
5134057 (c.*84+15_*84+16delAT),
5141232 (c.319+2594delG),
5141553 (c.319+2273delG),
5143366 (c.319+460delT),
5147081 (c.102-2679_102-2674delTGTGTC),
5149371 (c.101+2750delC),
-
-1kb
|
|---|
| coding sequence substitutions |
|---|
| premature termination by the nucleotide substitution | 0 |
|---|
| synonymous num | 2 |
|---|
| non-synonymous num | 0 |
|---|
| synonymous substitutions |
5143900 (p.Lys82Lys),
5144354 (p.Gly52Gly),
|
|---|
| non-synonymous substitutions |
|
|---|
B6 transcript
(ENSMUST00000156492)
|
MGGPRAWTLLCLGLLLPGGGAAWSVPGARFSGRRNWCSYVVTRTVSCHVQNGTYLQRVLQ
NCPWPMGCPGNSYRTVVRPLYKVTYKTVTAREWRCCPGHSGVTCEEGSPGLLEPTWTDSG
MRRMAVRPTALSGCLNCSKVSELTERLKALEAKVSSP*
|
|
MSMv4 transcript
|
MGGPRAWTLLCLGLLLPGGGAAWSVPGARFSGRRNWCSYVVTRTVSCHVQNGTYLQRVLQ
NCPWPMGCPGNSYRTVVRPLYKVTYKTVTAREWRCCPGHSGVTCEEGSPGLLEPTWTDSG
MRRMAVRPTALSGCLNCSKVSELTERLKALEAKVSSP*
|
| homology | 100.00 (158 / 158) |
|---|
|
