VariantTable
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name
Ncoa2 (ENSMUSG00000005886)
type
gene
link
VEGA
Ensembl
MGI
xref
definition
locus_tag
: Ncoa2
note
: nuclear receptor coactivator 2 [Source:MGI Symbol;Acc:MGI:1276533]
name
Ncoa2 (ENSMUSG00000005886)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000081713
name
Ncoa2 (ENSMUSG00000005886)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000068304
name
Ncoa2 (ENSMUSG00000005886)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000006037
name
Ncoa2 (ENSMUSG00000005886)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
CCDS:
CCDS35514.1
RefSeq_peptide:
NP_001289631
RefSeq_mRNA:
NM_001302702.1
RefSeq_mRNA_predicted:
XM_011238360.1
RefSeq_mRNA_predicted:
XM_011238361.1
RefSeq_peptide_predicted:
XP_011236662.1
RefSeq_peptide_predicted:
XP_011236663.1
Vega_transcript:
Ncoa2-001
Vega_transcript:
OTTMUST00000051358
Uniprot/SPTREMBL:
E9PV80
UCSC:uc007ail.2
EMBL:
AC091248
EMBL:
AC121538
GO:
GO:0000122
GO:
GO:0000978
GO:
GO:0001162
GO:
GO:0003682
GO:
GO:0003713
GO:
GO:0004402
GO:
GO:0005102
GO:
GO:0005515
GO:
GO:0005634
GO:
GO:0005737
GO:
GO:0006351
GO:
GO:0006355
GO:
GO:0016573
GO:
GO:0016922
GO:
GO:0030374
GO:
GO:0030375
GO:
GO:0032870
GO:
GO:0035257
GO:
GO:0045892
GO:
GO:0045944
GO:
GO:0046983
GO:
GO:1904017
GO:
GO:2000273
MGI_trans_name:
Ncoa2-001
Vega_translation:
178732
Vega_translation:
OTTMUSP00000024144
goslim_goa:
GO:0000988
goslim_goa:
GO:0003674
goslim_goa:
GO:0003677
goslim_goa:
GO:0005575
goslim_goa:
GO:0005622
goslim_goa:
GO:0005623
goslim_goa:
GO:0005634
goslim_goa:
GO:0005737
goslim_goa:
GO:0006464
goslim_goa:
GO:0008150
goslim_goa:
GO:0009058
goslim_goa:
GO:0016746
goslim_goa:
GO:0034641
goslim_goa:
GO:0043226
goslim_goa:
GO:0051276
OTTP:
OTTMUSP00000024144
OTTT:
OTTMUST00000051358
UniParc:
UPI00001EDCAC
definition
note
: transcript_id=ENSMUST00000081713
protein_id
: ENSMUSP00000080413
translation
: MSGMGENTSDPSRAETRKRKECPDQLGPSPKRSTEKRNREQENKYIEELAELIFANFNDIDNFNFKPDKCAILKETVKQIRQIKEQEKAAAANIDEVQKSDVSSTGQGVIDKDALGPMMLEALDGFFFVVNLEGSVVFVSENVTQYLRYNQEELMNKSVYSILHVGDHTEFVKNLLPKSMVNGGSWSGEPPRRSSHTFNCRMLVKPLPDSEEEGHDSQEAHQKYEAMQCFAVSQPKSIKEEGEDLQSCLICVARRVPMKERPTLPSSESFTTRQDLQGKITSLDTSTMRAAMKPGWEDLVRRCIQKFHTQHEGESLSYAKRHHHEVLRQGLAFSQIYRFSLSDGTLVAAQTKSKLIRSQTTNEPQLVISLHMLHREQNVCVMNPDLTGQAMGKPLNPISSSSPAHQALCSGNPGQDMTLGSNINFPMNGPKEQMGMPMGRFGGSGGMNHVSGMQATTPQGSNYALKMNSPSQSSPGMNPGQASSVLSPRQRMSPGVAGSPRIPPSQFSPAGSLHSPVGVCSSTGNSHSYTNSSLNALQALSEGHGVSLGSSLASPDLKMGNLQNSPVNMNPPPLSKMGSLDSKDCFGLYGEPSEGTTGQAEASCHPEEQKGPNDSSMPQAASGDRAEGHSRLHDSKGQTKLLQLLTTKSDQMEPSPLPSSLSDTNKDSTGSLPGPGSTHGTSLKEKHKILHRLLQDSSSPVDLAKLTAEATGKELSQESSSTAPGSEVTVKQEPASPKKKENALLRYLLDKDDTKDIGLPEITPKLERLDSKTDPASNTKLIAMKTVKEEVSFEPSDQPGSELDNLEEILDDLQNSQLPQLFPDTRPGAPTGSVDKQAIINDLMQLTADSSPVPPAGAQKAALRMSQSRMIGSSTSRPSMPSGEWAPQSPAVRVTCAATTGAMNRPVQGGMIRNPTASIPMRANSQPGQRQMLQSQVMNIGPSELEMNMGGPQYNQQQAPPNQTAPWPESILPIDQASFASQNRQPFGSSPDDLLCPHPAAESPSDEGALLDQLYLALRNFDGLEEIDRALGIPELVSQSQAVDAEQFSSQESSIMLEQKPPVFPQQYASQAQMAQGGYNPMQDPNFHTMGQRPNYTTLRMQPRPGLRPTGIVQNQPNQLRLQLQHRLQAQQNRQPLMNQISSVSNVNLTLRPGVPTQAPINAQMLAQRQREILNQHLRQRQMQQQVQQRTLMMRGQGLNVTPSMVAPAGLPAAMSNPRIPQANAQQFPFPPNYGISQQPDPGFTGATTPQSPLMSPRMAHTQSPMMQQSQANPAYQPTSDMNGWAQGSMGGNSMFSQQSPPHFGQQANTSMYSNNMNISVSMATNTGGLSSMNQMTGQMSMTSVTSVPTSGLPSMGPEQVNDPALRGGNLFPNQLPGMDMIKQEGDASRKYC
name
Ncoa2 (ENSMUSG00000005886)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
CCDS:
CCDS35514.1
Uniprot/SPTREMBL:
E9PV80
UCSC:uc007ain.2
EMBL:
AC091248
EMBL:
AC121538
GO:
GO:0000122
GO:
GO:0000978
GO:
GO:0001162
GO:
GO:0003682
GO:
GO:0003713
GO:
GO:0004402
GO:
GO:0005102
GO:
GO:0005515
GO:
GO:0005634
GO:
GO:0005737
GO:
GO:0006351
GO:
GO:0006355
GO:
GO:0016573
GO:
GO:0016922
GO:
GO:0030374
GO:
GO:0030375
GO:
GO:0032870
GO:
GO:0035257
GO:
GO:0045892
GO:
GO:0045944
GO:
GO:0046983
GO:
GO:1904017
GO:
GO:2000273
MGI_trans_name:
Ncoa2-201
goslim_goa:
GO:0000988
goslim_goa:
GO:0003674
goslim_goa:
GO:0003677
goslim_goa:
GO:0005575
goslim_goa:
GO:0005622
goslim_goa:
GO:0005623
goslim_goa:
GO:0005634
goslim_goa:
GO:0005737
goslim_goa:
GO:0006464
goslim_goa:
GO:0008150
goslim_goa:
GO:0009058
goslim_goa:
GO:0016746
goslim_goa:
GO:0034641
goslim_goa:
GO:0043226
goslim_goa:
GO:0051276
UniParc:
UPI00001EDCAC
definition
note
: transcript_id=ENSMUST00000068304
protein_id
: ENSMUSP00000069509
translation
: MSGMGENTSDPSRAETRKRKECPDQLGPSPKRSTEKRNREQENKYIEELAELIFANFNDIDNFNFKPDKCAILKETVKQIRQIKEQEKAAAANIDEVQKSDVSSTGQGVIDKDALGPMMLEALDGFFFVVNLEGSVVFVSENVTQYLRYNQEELMNKSVYSILHVGDHTEFVKNLLPKSMVNGGSWSGEPPRRSSHTFNCRMLVKPLPDSEEEGHDSQEAHQKYEAMQCFAVSQPKSIKEEGEDLQSCLICVARRVPMKERPTLPSSESFTTRQDLQGKITSLDTSTMRAAMKPGWEDLVRRCIQKFHTQHEGESLSYAKRHHHEVLRQGLAFSQIYRFSLSDGTLVAAQTKSKLIRSQTTNEPQLVISLHMLHREQNVCVMNPDLTGQAMGKPLNPISSSSPAHQALCSGNPGQDMTLGSNINFPMNGPKEQMGMPMGRFGGSGGMNHVSGMQATTPQGSNYALKMNSPSQSSPGMNPGQASSVLSPRQRMSPGVAGSPRIPPSQFSPAGSLHSPVGVCSSTGNSHSYTNSSLNALQALSEGHGVSLGSSLASPDLKMGNLQNSPVNMNPPPLSKMGSLDSKDCFGLYGEPSEGTTGQAEASCHPEEQKGPNDSSMPQAASGDRAEGHSRLHDSKGQTKLLQLLTTKSDQMEPSPLPSSLSDTNKDSTGSLPGPGSTHGTSLKEKHKILHRLLQDSSSPVDLAKLTAEATGKELSQESSSTAPGSEVTVKQEPASPKKKENALLRYLLDKDDTKDIGLPEITPKLERLDSKTDPASNTKLIAMKTVKEEVSFEPSDQPGSELDNLEEILDDLQNSQLPQLFPDTRPGAPTGSVDKQAIINDLMQLTADSSPVPPAGAQKAALRMSQSRMIGSSTSRPSMPSGEWAPQSPAVRVTCAATTGAMNRPVQGGMIRNPTASIPMRANSQPGQRQMLQSQVMNIGPSELEMNMGGPQYNQQQAPPNQTAPWPESILPIDQASFASQNRQPFGSSPDDLLCPHPAAESPSDEGALLDQLYLALRNFDGLEEIDRALGIPELVSQSQAVDAEQFSSQESSIMLEQKPPVFPQQYASQAQMAQGGYNPMQDPNFHTMGQRPNYTTLRMQPRPGLRPTGIVQNQPNQLRLQLQHRLQAQQNRQPLMNQISSVSNVNLTLRPGVPTQAPINAQMLAQRQREILNQHLRQRQMQQQVQQRTLMMRGQGLNVTPSMVAPAGLPAAMSNPRIPQANAQQFPFPPNYGISQQPDPGFTGATTPQSPLMSPRMAHTQSPMMQQSQANPAYQPTSDMNGWAQGSMGGNSMFSQQSPPHFGQQANTSMYSNNMNISVSMATNTGGLSSMNQMTGQMSMTSVTSVPTSGLPSMGPEQVNDPALRGGNLFPNQLPGMDMIKQEGDASRKYC
name
Ncoa2 (ENSMUSG00000005886)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
CCDS:
CCDS35515.1
Uniprot/SWISSPROT:
Q61026
RefSeq_peptide:
NP_032704
RefSeq_mRNA:
NM_008678.3
RefSeq_mRNA_predicted:
XM_006495465
RefSeq_mRNA_predicted:
XM_006495466
RefSeq_mRNA_predicted:
XM_006495467
RefSeq_mRNA_predicted:
XM_006495468
RefSeq_peptide_predicted:
XP_006495528.1
RefSeq_peptide_predicted:
XP_011236653.1
RefSeq_peptide_predicted:
XP_011236655.1
RefSeq_peptide_predicted:
XP_011236656.1
RefSeq_peptide_predicted:
XP_011236657.1
RefSeq_peptide_predicted:
XP_011236658.1
RefSeq_peptide_predicted:
XP_011236659.1
RefSeq_peptide_predicted:
XP_011236660.1
RefSeq_peptide_predicted:
XP_011236661.1
Vega_transcript:
Ncoa2-002
Vega_transcript:
OTTMUST00000051367
UCSC:uc007aim.2
EMBL:
AC091248
EMBL:
AC121538
EMBL:
AF000582
EMBL:
U39060
GO:
GO:0000122
GO:
GO:0000978
GO:
GO:0001162
GO:
GO:0003682
GO:
GO:0003713
GO:
GO:0004402
GO:
GO:0005102
GO:
GO:0005515
GO:
GO:0005515
GO:
GO:0005634
GO:
GO:0005654
GO:
GO:0005737
GO:
GO:0006351
GO:
GO:0006355
GO:
GO:0007623
GO:
GO:0008134
GO:
GO:0010906
GO:
GO:0016573
GO:
GO:0016922
GO:
GO:0016922
GO:
GO:0030374
GO:
GO:0030374
GO:
GO:0030375
GO:
GO:0032870
GO:
GO:0032922
GO:
GO:0035257
GO:
GO:0045475
GO:
GO:0045892
GO:
GO:0045944
GO:
GO:0046983
GO:
GO:1904017
GO:
GO:2000273
MGI_trans_name:
Ncoa2-002
PDB:
1L2I
PDB:
1OSV
PDB:
1WM0
PDB:
2Q6J
PDB:
2QA6
PDB:
2QA8
PDB:
2QAB
PDB:
2QGT
PDB:
2QGW
PDB:
2QH6
PDB:
2QPY
PDB:
2QR9
PDB:
2QSE
PDB:
2QXM
PDB:
2QZO
PDB:
3MNE
PDB:
3MNO
PDB:
3MNP
Vega_translation:
178733
Vega_translation:
OTTMUSP00000024153
goslim_goa:
GO:0000988
goslim_goa:
GO:0003674
goslim_goa:
GO:0003677
goslim_goa:
GO:0005575
goslim_goa:
GO:0005622
goslim_goa:
GO:0005623
goslim_goa:
GO:0005634
goslim_goa:
GO:0005654
goslim_goa:
GO:0005737
goslim_goa:
GO:0006464
goslim_goa:
GO:0008134
goslim_goa:
GO:0008150
goslim_goa:
GO:0009058
goslim_goa:
GO:0016746
goslim_goa:
GO:0034641
goslim_goa:
GO:0043226
goslim_goa:
GO:0051276
protein_id:
AAB61575.1
protein_id:
AAC53151.1
OTTP:
OTTMUSP00000024153
OTTT:
OTTMUST00000051367
Reactome:
R-MMU-1266738
Reactome:
R-MMU-1430728
Reactome:
R-MMU-159418
Reactome:
R-MMU-162582
Reactome:
R-MMU-192105
Reactome:
R-MMU-193368
Reactome:
R-MMU-193807
Reactome:
R-MMU-194068
Reactome:
R-MMU-194315
Reactome:
R-MMU-195258
Reactome:
R-MMU-211859
Reactome:
R-MMU-211897
Reactome:
R-MMU-211945
Reactome:
R-MMU-211976
Reactome:
R-MMU-3214847
Reactome:
R-MMU-3247509
Reactome:
R-MMU-381340
Reactome:
R-MMU-400206
Reactome:
R-MMU-442533
Reactome:
R-MMU-4839726
Reactome:
R-MMU-5334727
Reactome:
R-MMU-535734
Reactome:
R-MMU-556833
Reactome:
R-MMU-5625740
Reactome:
R-MMU-5625886
UniParc:
UPI00001C20C2
definition
note
: transcript_id=ENSMUST00000006037
protein_id
: ENSMUSP00000006037
translation
: MSGMGENTSDPSRAETRKRKECPDQLGPSPKRSTEKRNREQENKYIEELAELIFANFNDIDNFNFKPDKCAILKETVKQIRQIKEQEKAAAANIDEVQKSDVSSTGQGVIDKDALGPMMLEALDGFFFVVNLEGSVVFVSENVTQYLRYNQEELMNKSVYSILHVGDHTEFVKNLLPKSMVNGGSWSGEPPRRSSHTFNCRMLVKPLPDSEEEGHDSQEAHQKYEAMQCFAVSQPKSIKEEGEDLQSCLICVARRVPMKERPTLPSSESFTTRQDLQGKITSLDTSTMRAAMKPGWEDLVRRCIQKFHTQHEGESLSYAKRHHHEVLRQGLAFSQIYRFSLSDGTLVAAQTKSKLIRSQTTNEPQLVISLHMLHREQNVCVMNPDLTGQAMGKPLNPISSSSPAHQALCSGNPGQDMTLGSNINFPMNGPKEQMGMPMGRFGGSGGMNHVSGMQATTPQGSNYALKMNSPSQSSPGMNPGQASSVLSPRQRMSPGVAGSPRIPPSQFSPAGSLHSPVGVCSSTGNSHSYTNSSLNALQALSEGHGVSLGSSLASPDLKMGNLQNSPVNMNPPPLSKMGSLDSKDCFGLYGEPSEGTTGQAEASCHPEEQKGPNDSSMPQAASGDRAEGHSRLHDSKGQTKLLQLLTTKSDQMEPSPLPSSLSDTNKDSTGSLPGPGSTHGTSLKEKHKILHRLLQDSSSPVDLAKLTAEATGKELSQESSSTAPGSEVTVKQEPASPKKKENALLRYLLDKDDTKDIGLPEITPKLERLDSKTDPASNTKLIAMKTVKEEVSFEPSDQPGSELDNLEEILDDLQNSQLPQLFPDTRPGAPTGSVDKQAIINDLMQLTADSSPVPPAGAQKAALRMSQSTFNNPRPGQLGRLLPNQNLPLDITLQSPTGAGPFPPIRNSSPYSVIPQPGMMGNQGMLGSQGNLGNNSTGMIGSSTSRPSMPSGEWAPQSPAVRVTCAATTGAMNRPVQGGMIRNPTASIPMRANSQPGQRQMLQSQVMNIGPSELEMNMGGPQYNQQQAPPNQTAPWPESILPIDQASFASQNRQPFGSSPDDLLCPHPAAESPSDEGALLDQLYLALRNFDGLEEIDRALGIPELVSQSQAVDAEQFSSQESSIMLEQKPPVFPQQYASQAQMAQGGYNPMQDPNFHTMGQRPNYTTLRMQPRPGLRPTGIVQNQPNQLRLQLQHRLQAQQNRQPLMNQISSVSNVNLTLRPGVPTQAPINAQMLAQRQREILNQHLRQRQMQQQVQQRTLMMRGQGLNVTPSMVAPAGLPAAMSNPRIPQANAQQFPFPPNYGISQQPDPGFTGATTPQSPLMSPRMAHTQSPMMQQSQANPAYQPTSDMNGWAQGSMGGNSMFSQQSPPHFGQQANTSMYSNNMNISVSMATNTGGLSSMNQMTGQMSMTSVTSVPTSGLPSMGPEQVNDPALRGGNLFPNQLPGMDMIKQEGDASRKYC
name
type
misc_feature
link
xref
definition
note
: contig AC091248.6 8..169501(-1)
name
Ncoa2 (ENSMUSG00000005886)
type
misc_RNA
link
VEGA
Ensembl
MGI
xref
Vega_transcript:
OTTMUST00000051368
Vega_transcript:
OTTMUST00000051368
MGI_trans_name:
Ncoa2-003
OTTT:
OTTMUST00000051368
definition
note
: retained_intron
note
: transcript_id=ENSMUST00000147927
name
Ncoa2 (ENSMUSG00000005886)
type
misc_RNA
link
VEGA
Ensembl
MGI
xref
Vega_transcript:
OTTMUST00000051369
Vega_transcript:
OTTMUST00000051369
MGI_trans_name:
Ncoa2-004
OTTT:
OTTMUST00000051369
definition
note
: retained_intron
note
: transcript_id=ENSMUST00000143603
name
Ncoa2 (ENSMUSG00000005886)
type
misc_RNA
link
VEGA
Ensembl
MGI
xref
Vega_transcript:
OTTMUST00000051371
Vega_transcript:
OTTMUST00000051371
MGI_trans_name:
Ncoa2-006
OTTT:
OTTMUST00000051371
definition
note
: retained_intron
note
: transcript_id=ENSMUST00000139970
name
Ncoa2 (ENSMUSG00000005886)
type
misc_RNA
link
VEGA
Ensembl
MGI
xref
Vega_transcript:
OTTMUST00000051370
Vega_transcript:
OTTMUST00000051370
MGI_trans_name:
Ncoa2-005
OTTT:
OTTMUST00000051370
definition
note
: retained_intron
note
: transcript_id=ENSMUST00000124088
Location
chromosome :
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
X
(Build: mm10)
view_point (b.p.) :
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Picture width(pt) :
Colors
Annotation:
Gene
mRNA
CDS
genetic markers
Tracks
RefSeq genes :
not show
show
Gene, mRNA, CDS :
not show
show
MSM BAC end pairs :
not show
show
B6N BAC end pairs :
not show
show
MSMv4 :
not show
show
JF1v3 :
not show
show
KJRv1 :
not show
show
SWNv1 :
not show
show
CHDv1 :
not show
show
NJLv1 :
not show
show
BLG2v1 :
not show
show
HMIv1 :
not show
show
BFMv1 :
not show
show
PGNv1 :
not show
show
Click to browse alignment view.
BAC clone ordering.