VariantTable
SequenceCutter
Homology
search
Download
Updated genome
information
Help
& Docs
Previous ver
(NIG_MoG data)
Tutorials are available here.
Search for genomic variation
Search for mouse strain
BAC clone ordering.
cursor point :
On scale region : Click two point for zoom in view region.
On read coverage region : Click to browse alignment view.
name
Gsta3 (ENSMUSG00000025934)
type
gene
link
VEGA
Ensembl
MGI
xref
definition
locus_tag
: Gsta3
note
: glutathione S-transferase, alpha 3 [Source:MGI Symbol;Acc:MGI:95856]
name
Gm28836 (ENSMUSG00000099343)
type
gene
link
VEGA
Ensembl
MGI
xref
definition
locus_tag
: Gm28836
note
: predicted gene 28836 [Source:MGI Symbol;Acc:MGI:5579542]
name
Gsta3 (ENSMUSG00000025934)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000027067
name
Gsta3 (ENSMUSG00000025934)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000121676
name
Gsta3 (ENSMUSG00000025934)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000124990
name
Gsta3 (ENSMUSG00000025934)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
CCDS:
CCDS14847.1
Uniprot/SWISSPROT:
P30115
RefSeq_peptide:
NP_034486
RefSeq_mRNA:
NM_010356.4
Vega_transcript:
Gsta3-001
Vega_transcript:
OTTMUST00000065121
UCSC:uc007all.2
Fantom:
3110023K06
Fantom:
C730035C17
EMBL:
AK014076
EMBL:
AK149543
EMBL:
BC147272
EMBL:
BC147273
EMBL:
CH466536
EMBL:
M73483
EMBL:
X65021
GO:
GO:0001657
GO:
GO:0004364
GO:
GO:0005737
GO:
GO:0006749
GO:
GO:0046223
GO:
GO:0070062
MGI_trans_name:
Gsta3-001
Vega_translation:
178819
Vega_translation:
OTTMUSP00000032414
goslim_goa:
GO:0003674
goslim_goa:
GO:0005575
goslim_goa:
GO:0005576
goslim_goa:
GO:0005622
goslim_goa:
GO:0005623
goslim_goa:
GO:0005737
goslim_goa:
GO:0006790
goslim_goa:
GO:0008150
goslim_goa:
GO:0009056
goslim_goa:
GO:0016765
goslim_goa:
GO:0019748
goslim_goa:
GO:0034641
goslim_goa:
GO:0043226
goslim_goa:
GO:0048856
protein_id:
AAA37751.1
protein_id:
AAI47273.1
protein_id:
AAI47274.1
protein_id:
BAB29143.1
protein_id:
BAE28948.1
protein_id:
CAA46155.1
protein_id:
EDL14389.1
protein_id:
EDL14390.1
OTTP:
OTTMUSP00000032414
OTTT:
OTTMUST00000065121
Reactome:
R-MMU-1430728
Reactome:
R-MMU-156580
Reactome:
R-MMU-156590
Reactome:
R-MMU-211859
UniParc:
UPI00000018D2
definition
note
: transcript_id=ENSMUST00000027067
protein_id
: ENSMUSP00000027067
translation
: MAGKPVLHYFDGRGRMEPIRWLLAAAGVEFEEKFLKTRDDLARLRSDGSLMFQQVPMVEIDGMKLVQTKAILNYIASKYNLYGKDMKERAIIDMYTEGVADLEIMILYYPHMPPEEKEASLAKIKEQTRNRYFPAFEKVLKSHGQDYLVGNRLSRADIALVELLYHVEELDPGVVDNFPLLKALRSRVSNLPTVKKFLQPGSQRKPFDDAKCVESAKKIFS
name
Gsta3 (ENSMUSG00000025934)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
CCDS:
CCDS14847.1
Uniprot/SWISSPROT:
P30115
RefSeq_peptide:
NP_001070821
RefSeq_mRNA:
NM_001077353.2
Vega_transcript:
Gsta3-002
Vega_transcript:
OTTMUST00000065122
UCSC:uc007alk.2
Fantom:
3110023K06
Fantom:
C730035C17
EMBL:
AK014076
EMBL:
AK149543
EMBL:
BC147272
EMBL:
BC147273
EMBL:
CH466536
EMBL:
M73483
EMBL:
X65021
GO:
GO:0001657
GO:
GO:0004364
GO:
GO:0005737
GO:
GO:0006749
GO:
GO:0046223
GO:
GO:0070062
MGI_trans_name:
Gsta3-002
Vega_translation:
178820
Vega_translation:
OTTMUSP00000032415
goslim_goa:
GO:0003674
goslim_goa:
GO:0005575
goslim_goa:
GO:0005576
goslim_goa:
GO:0005622
goslim_goa:
GO:0005623
goslim_goa:
GO:0005737
goslim_goa:
GO:0006790
goslim_goa:
GO:0008150
goslim_goa:
GO:0009056
goslim_goa:
GO:0016765
goslim_goa:
GO:0019748
goslim_goa:
GO:0034641
goslim_goa:
GO:0043226
goslim_goa:
GO:0048856
protein_id:
AAA37751.1
protein_id:
AAI47273.1
protein_id:
AAI47274.1
protein_id:
BAB29143.1
protein_id:
BAE28948.1
protein_id:
CAA46155.1
protein_id:
EDL14389.1
protein_id:
EDL14390.1
OTTP:
OTTMUSP00000032415
OTTT:
OTTMUST00000065122
Reactome:
R-MMU-1430728
Reactome:
R-MMU-156580
Reactome:
R-MMU-156590
Reactome:
R-MMU-211859
UniParc:
UPI00000018D2
definition
note
: transcript_id=ENSMUST00000121676
protein_id
: ENSMUSP00000113262
translation
: MAGKPVLHYFDGRGRMEPIRWLLAAAGVEFEEKFLKTRDDLARLRSDGSLMFQQVPMVEIDGMKLVQTKAILNYIASKYNLYGKDMKERAIIDMYTEGVADLEIMILYYPHMPPEEKEASLAKIKEQTRNRYFPAFEKVLKSHGQDYLVGNRLSRADIALVELLYHVEELDPGVVDNFPLLKALRSRVSNLPTVKKFLQPGSQRKPFDDAKCVESAKKIFS
name
Gsta3 (ENSMUSG00000025934)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
RefSeq_peptide:
NP_001275546.1
RefSeq_mRNA:
NM_001288617.1
Vega_transcript:
Gsta3-003
Vega_transcript:
OTTMUST00000065123
Uniprot/SPTREMBL:
A0A087WQI6
UCSC:uc033fih.1
EMBL:
AC163025
GO:
GO:0004364
GO:
GO:0046223
GO:
GO:0070062
MGI_trans_name:
Gsta3-003
Vega_translation:
178821
Vega_translation:
OTTMUSP00000067596
goslim_goa:
GO:0003674
goslim_goa:
GO:0005575
goslim_goa:
GO:0005576
goslim_goa:
GO:0008150
goslim_goa:
GO:0009056
goslim_goa:
GO:0016765
goslim_goa:
GO:0019748
goslim_goa:
GO:0043226
OTTP:
OTTMUSP00000067596
OTTT:
OTTMUST00000065123
UniParc:
UPI0004621095
definition
note
: transcript_id=ENSMUST00000124990
protein_id
: ENSMUSP00000140210
translation
: MFQQVPMVEIDGMKLVQTKAILNYIASKYNLYGKDMKERAIIDMYTEGVADLEIMILYYPHMPPEEKEASLAKIKEQTRNRYFPAFEKVLKSHGQDYLVGNRLSRADIALVELLYHVEELDPGVVDNFPLLKA
name
type
misc_feature
link
xref
definition
note
: contig AC163025.3 76143..174774(1)
name
Gm28836 (ENSMUSG00000099343)
type
misc_RNA
link
VEGA
Ensembl
MGI
xref
Vega_transcript:
OTTMUST00000124322
Vega_transcript:
OTTMUST00000124322
Clone_based_vega_transcript:RP23-80N7.2-001
MGI_trans_name:
Gm28836-001
OTTT:
OTTMUST00000124322
RNACentral:URS0000780936
definition
note
: antisense
note
: transcript_id=ENSMUST00000185842
Location
chromosome :
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
X
(Build: mm10)
view_point (b.p.) :
-
zoom in :
zoom out :
Picture width(pt) :
Colors
Annotation:
Gene
mRNA
CDS
genetic markers
Tracks
RefSeq genes :
not show
show
Gene, mRNA, CDS :
not show
show
MSM BAC end pairs :
not show
show
B6N BAC end pairs :
not show
show
MSMv4 :
not show
show
JF1v3 :
not show
show
KJRv1 :
not show
show
SWNv1 :
not show
show
CHDv1 :
not show
show
NJLv1 :
not show
show
BLG2v1 :
not show
show
HMIv1 :
not show
show
BFMv1 :
not show
show
PGNv1 :
not show
show
Click to browse alignment view.