VariantTable
SequenceCutter
Homology
search
Download
Updated genome
information
Help
& Docs
Previous ver
(NIG_MoG data)
Tutorials are available here.
Search for genomic variation
Search for mouse strain
BAC clone ordering.
cursor point :
On scale region : Click two point for zoom in view region.
On read coverage region : Click to browse alignment view.
name
Adgrb3 (ENSMUSG00000033569)
type
gene
link
VEGA
Ensembl
MGI
xref
definition
locus_tag
: Adgrb3
note
: adhesion G protein-coupled receptor B3 [Source:MGI Symbol;Acc:MGI:2441837]
name
Adgrb3 (ENSMUSG00000033569)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000126626
name
Adgrb3 (ENSMUSG00000033569)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000146592
name
Adgrb3 (ENSMUSG00000033569)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000135518
name
Adgrb3 (ENSMUSG00000033569)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000151309
name
Adgrb3 (ENSMUSG00000033569)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000041838
name
Adgrb3 (ENSMUSG00000033569)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
Vega_transcript:
Bai3-006
Vega_transcript:
OTTMUST00000062410
Uniprot/SPTREMBL:
Q8BJ13
UCSC:uc007amy.1
Fantom:
A930003C21
EMBL:
AC116556
EMBL:
AC117221
EMBL:
AC121828
EMBL:
AC122187
EMBL:
AC129314
EMBL:
AC140308
EMBL:
AK044248
MGI_trans_name:
Adgrb3-006
Vega_translation:
178858
Vega_translation:
OTTMUSP00000030756
protein_id:
BAC31839.1
OTTP:
OTTMUSP00000030756
OTTT:
OTTMUST00000062410
UniParc:
UPI00000EB75E
definition
note
: transcript_id=ENSMUST00000126626
protein_id
: ENSMUSP00000115442
translation
: MESSGTPSVTLIVGSGLSCLALITLAVVYAALWRYIRSERSIILINFCLSIISSNILILVGQTQTHNKSICTTTTAFLHFFFLASFCWVLTEAWQSYMAVTGKIRTRLIRKRFLCLGWGLPALVVATSVGFTRTKGYGTDHYCWLSLEGGLLYAFVGPAAAVVLVNMVIGILVFNKLVSRDGILDKKLKHRAGQMSEPHSGLTLKCAKCGVVSTTALSATTASNAMASLWSSCVVLPLLALTWMSAVLAMTDKRSILFQILFAVFDSLQGFVIVMVHCILRREVQDAFRCRLRNCQDPINADSSSSFPNGHAQIMTDFEKDVDIACRSVLHKDIGPCRAATITGTLSRISLNDDEEEKGTNPEGLSYSTLPGNVISKVIIQQPTGLHMPMSMNELSNPCLKKENTELRRTVYLCTDDNLRGADMDIVHPQERMMESDYIVMPRSSVSTQPSMKEESKMNIGMETLPHERLLHYKVNPEFNMNPPVMDQFNMNLDQHLAPQEHMQNLPFEPRTAVKNFMASELDDNVGLSRSETGSTISMSSLERRKSRYSDLDFEKVMHTRKRHMELFQELNQKFQTLDRFRDIPNTSSMENPAPNKNPWDTFKPPSEYQHYTTINVLDTEAKDTLELRPAEWEKCLNLPLDVQEGDFQTEV
name
Adgrb3 (ENSMUSG00000033569)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
Vega_transcript:
Bai3-002
Vega_transcript:
OTTMUST00000062406
Uniprot/SPTREMBL:
Q68FL1
UCSC:uc007amw.2
EMBL:
AC116556
EMBL:
AC117221
EMBL:
AC121828
EMBL:
AC122187
EMBL:
AC129314
EMBL:
AC140308
EMBL:
BC079670
MGI_trans_name:
Adgrb3-002
Vega_translation:
178859
Vega_translation:
OTTMUSP00000030755
protein_id:
AAH79670.1
OTTP:
OTTMUSP00000030755
OTTT:
OTTMUST00000062406
UniParc:
UPI0000419EA4
definition
note
: transcript_id=ENSMUST00000146592
protein_id
: ENSMUSP00000116759
translation
: DDQSLVLLNNVVLPLNEQTEGCLTQELQTTQVCNLTREAKRPPKEEFGMMGDHTIKSQRPRSVHEKRVPQEQADAAKFMAQTGESGVEEWSQWSACSVTCGQGSQVRTRTCVSPYGTHCSGPLRESRVCNNTALCPVHGVWEEWSPWSLCSFTCGRGQRTRTRSCTPPQYGGRPCEGPETHHKPCNIALCPVDGQWQEWSSWSHCSVTCSNGTQQRSRQCTAAAHGGSECRGPWAESRECYNPECTANGQWNQWGHWSGCSKSCDGGWERRMRTCQGAAVTGQQCEGTGEEVRRCSEQRCPAPYEICPEDYLISMVWKRTPAGDLAFNQCPLNATGTTSRRCSLSLHGVASWEQPSFARCISNEYRHLQHSIKEHLAKGQRMLAGDGMSQVTKTLLDLTQRKNFYAGDLLVSVEILRNVTDTFKRASYIPASDGVQNFFQIVSNLLDEENKEKWEDAQQIYPGSIELMQVIEDFIHIVGMGMMDFQNSYLMTGNVVASIQKLPAASVLTDINFPMKGRKGMVDWARNSEDRVVIPKSIFTPVSSKELDESSVFVLGAVLYKNLDLILPTLRNYTVVNSKVIVVTIRPEPKTTDSFLEIELAHLANGTLNPYCVLWDDSKSNESLGTWSTQGCKTVLTDASHTKCLCDRLSTFAILAQQPREIVMESSGTPSVTLIVGSGLSCLALITLAVVYAALWRYIRSERSIILINFCLSIISSNILILVGQTQTHNKSICTTTTAFLHFFFLASFCWVLTEAWQSYMAVTGKIRTRLIRKRFLCLGWGLPALVVATSVGFTRTKGYGTDHYCWLSLEGGLLYAFVGPAAAVVLVNMVIGILVFNKLVSRDGILDKKLKHRAGASLWSSCVVLPLLALTWMSAVLAMTDKRSILFQILFAVFDSLQGFVIVMVHCILRREVQDAFRCRLRNCQDPINADSSSSFPNGHAQIMTDFEKDVDIACRSVLHKDIGPCRAATITGTLSRISLNDDEEEKGTNPEGLSYSTLPGNVISKVIIQQPTGLHMPMSMNELSNPCLKKENTELRRTVYLCTDDNLRGADMDIVHPQERMMESDYIVMPRSSVSTQPSMKEESKMNIGMETLPHERLLHYKVNPEFNMNPPVMDQFNMNLDQHLAPQEHMQNLPFEPRTAVKNFMASELDDNVGLSRSETGSTISMSSLERRKSRYSDLDFEKVMHTRKRHMELFQELNQKFQTLDRFRDIPNTSSMENPAPNKNPWDTFKPPSEYQHYTTINVLDTEAKDTLELRPAEWEKCLNLPLDVQEGDFQTEV
name
Adgrb3 (ENSMUSG00000033569)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
CCDS:
CCDS14855.1
Uniprot/SWISSPROT:
Q80ZF8
RefSeq_peptide_predicted:
XP_006495880.1
Vega_transcript:
Bai3-008
Vega_transcript:
OTTMUST00000062607
UCSC:uc011wis.1
EMBL:
AC116556
EMBL:
AC117221
EMBL:
AC121828
EMBL:
AC122187
EMBL:
AC129314
EMBL:
AC140308
EMBL:
AY168406
EMBL:
CH466536
GO:
GO:0004930
GO:
GO:0005096
GO:
GO:0005515
GO:
GO:0005886
GO:
GO:0007166
GO:
GO:0007186
GO:
GO:0007520
GO:
GO:0016021
GO:
GO:0016525
GO:
GO:0043547
GO:
GO:0048814
GO:
GO:0051965
MGI_trans_name:
Adgrb3-008
Vega_translation:
178860
Vega_translation:
OTTMUSP00000030892
goslim_goa:
GO:0003674
goslim_goa:
GO:0004871
goslim_goa:
GO:0005575
goslim_goa:
GO:0005623
goslim_goa:
GO:0005886
goslim_goa:
GO:0007165
goslim_goa:
GO:0008150
goslim_goa:
GO:0030154
goslim_goa:
GO:0030234
goslim_goa:
GO:0048646
goslim_goa:
GO:0048856
protein_id:
AAO27431.1
protein_id:
EDL14414.1
OTTP:
OTTMUSP00000030892
OTTT:
OTTMUST00000062607
UniParc:
UPI00001ECF80
definition
note
: transcript_id=ENSMUST00000135518
protein_id
: ENSMUSP00000119804
translation
: MKAVRNLLIYIFSTYLLVMFGFNAAQDFWCSTLVKGVIYGSYSVSEMFPKNFTNCTWTLENPDPTKYSIYLKFSKKDLSCSNFSLLAYQFDHFSHEKIKDLLRKNHSIMQLCSSKNAFVFLQYDKNFIQIRRVFPTDFPGLQKKVEEDQKSFFEFLVLNKVSPSQFGCHVLCTWLESCLKSENGRTESCGIMYTKCTCPQHLGEWGIDDQSLVLLNNVVLPLNEQTEGCLTQELQTTQVCNLTREAKRPPKEEFGMMGDHTIKSQRPRSVHEKRVPQEQADAAKFMAQTGESGVEEWSQWSACSVTCGQGSQVRTRTCVSPYGTHCSGPLRESRVCNNTALCPVHGVWEEWSPWSLCSFTCGRGQRTRTRSCTPPQYGGRPCEGPETHHKPCNIALCPVDGQWQEWSSWSHCSVTCSNGTQQRSRQCTAAAHGGSECRGPWAESRECYNPECTANGQWNQWGHWSGCSKSCDGGWERRMRTCQGAAVTGQQCEGTGEEVRRCSEQRCPAPYEICPEDYLISMVWKRTPAGDLAFNQCPLNATGTTSRRCSLSLHGVASWEQPSFARCISNEYRHLQHSIKEHLAKGQRMLAGDGMSQVTKTLLDLTQRKNFYAGDLLVSVEILRNVTDTFKRASYIPASDGVQNFFQIVSNLLDEENKEKWEDAQQIYPGSIELMQVIEDFIHIVGMGMMDFQNSYLMTGNVVASIQKLPAASVLTDINFPMKGRKGMVDWARNSEDRVVIPKSIFTPVSSKELDESSVFVLGAVLYKNLDLILPTLRNYTVVNSKVIVVTIRPEPKTTDSFLEIELAHLANGTLNPYCVLWDDSKSNESLGTWSTQGCKTVLTDASHTKCLCDRLSTFAILAQQPREIVMESSGTPSVTLIVGSGLSCLALITLAVVYAALWRYIRSERSIILINFCLSIISSNILILVGQTQTHNKSICTTTTAFLHFFFLASFCWVLTEAWQSYMAVTGKIRTRLIRKRFLCLGWGLPALVVATSVGFTRTKGYGTDHYCWLSLEGGLLYAFVGPAAAVVLVNMVIGILVFNKLVSRDGILDKKLKHRAGQMSEPHSGLTLKCAKCGVVSTTALSATTASNAMASLWSSCVVLPLLALTWMSAVLAMTDKRSILFQILFAVFDSLQGFVIVMVHCILRREVQDAFRCRLRNCQDPINADSSSSFPNGHAQIMTDFEKDVDIACRSVLHKDIGPCRAATITGTLSRISLNDDEEEKGTNPEGLSYSTLPGNVISKVIIQQPTGLHMPMSMNELSNPCLKKENTELRRTVYLCTDDNLRGADMDIVHPQERMMESDYIVMPRSSVSTQPSMKEESKMNIGMETLPHERLLHYKVNPEFNMNPPVMDQFNMNLDQHLAPQEHMQNLPFEPRTAVKNFMASELDDNVGLSRSETGSTISMSSLERRKSRYSDLDFEKVMHTRKRHMELFQELNQKFQTLDRFRDIPNTSSMENPAPNKNPWDTFKPPSEYQHYTTINVLDTEAKDTLELRPAEWEKCLNLPLDVQEGDFQTEV
name
Adgrb3 (ENSMUSG00000033569)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
CCDS:
CCDS14855.1
Uniprot/SWISSPROT:
Q80ZF8
RefSeq_peptide:
NP_783573
RefSeq_mRNA:
NM_175642.4
RefSeq_peptide_predicted:
XP_006495880.1
Vega_transcript:
Bai3-001
Vega_transcript:
OTTMUST00000062405
UCSC:uc011wis.1
EMBL:
AC116556
EMBL:
AC117221
EMBL:
AC121828
EMBL:
AC122187
EMBL:
AC129314
EMBL:
AC140308
EMBL:
AY168406
EMBL:
CH466536
GO:
GO:0004930
GO:
GO:0005096
GO:
GO:0005515
GO:
GO:0005515
GO:
GO:0005886
GO:
GO:0005886
GO:
GO:0007166
GO:
GO:0007186
GO:
GO:0007520
GO:
GO:0007520
GO:
GO:0016021
GO:
GO:0016525
GO:
GO:0043547
GO:
GO:0048814
GO:
GO:0051965
MGI_trans_name:
Adgrb3-001
Vega_translation:
178861
Vega_translation:
OTTMUSP00000030754
goslim_goa:
GO:0003674
goslim_goa:
GO:0004871
goslim_goa:
GO:0005575
goslim_goa:
GO:0005623
goslim_goa:
GO:0005886
goslim_goa:
GO:0007165
goslim_goa:
GO:0008150
goslim_goa:
GO:0030154
goslim_goa:
GO:0030234
goslim_goa:
GO:0048646
goslim_goa:
GO:0048856
protein_id:
AAO27431.1
protein_id:
EDL14414.1
OTTP:
OTTMUSP00000030754
OTTT:
OTTMUST00000062405
UniParc:
UPI00001ECF80
definition
note
: transcript_id=ENSMUST00000151309
protein_id
: ENSMUSP00000116231
translation
: MKAVRNLLIYIFSTYLLVMFGFNAAQDFWCSTLVKGVIYGSYSVSEMFPKNFTNCTWTLENPDPTKYSIYLKFSKKDLSCSNFSLLAYQFDHFSHEKIKDLLRKNHSIMQLCSSKNAFVFLQYDKNFIQIRRVFPTDFPGLQKKVEEDQKSFFEFLVLNKVSPSQFGCHVLCTWLESCLKSENGRTESCGIMYTKCTCPQHLGEWGIDDQSLVLLNNVVLPLNEQTEGCLTQELQTTQVCNLTREAKRPPKEEFGMMGDHTIKSQRPRSVHEKRVPQEQADAAKFMAQTGESGVEEWSQWSACSVTCGQGSQVRTRTCVSPYGTHCSGPLRESRVCNNTALCPVHGVWEEWSPWSLCSFTCGRGQRTRTRSCTPPQYGGRPCEGPETHHKPCNIALCPVDGQWQEWSSWSHCSVTCSNGTQQRSRQCTAAAHGGSECRGPWAESRECYNPECTANGQWNQWGHWSGCSKSCDGGWERRMRTCQGAAVTGQQCEGTGEEVRRCSEQRCPAPYEICPEDYLISMVWKRTPAGDLAFNQCPLNATGTTSRRCSLSLHGVASWEQPSFARCISNEYRHLQHSIKEHLAKGQRMLAGDGMSQVTKTLLDLTQRKNFYAGDLLVSVEILRNVTDTFKRASYIPASDGVQNFFQIVSNLLDEENKEKWEDAQQIYPGSIELMQVIEDFIHIVGMGMMDFQNSYLMTGNVVASIQKLPAASVLTDINFPMKGRKGMVDWARNSEDRVVIPKSIFTPVSSKELDESSVFVLGAVLYKNLDLILPTLRNYTVVNSKVIVVTIRPEPKTTDSFLEIELAHLANGTLNPYCVLWDDSKSNESLGTWSTQGCKTVLTDASHTKCLCDRLSTFAILAQQPREIVMESSGTPSVTLIVGSGLSCLALITLAVVYAALWRYIRSERSIILINFCLSIISSNILILVGQTQTHNKSICTTTTAFLHFFFLASFCWVLTEAWQSYMAVTGKIRTRLIRKRFLCLGWGLPALVVATSVGFTRTKGYGTDHYCWLSLEGGLLYAFVGPAAAVVLVNMVIGILVFNKLVSRDGILDKKLKHRAGQMSEPHSGLTLKCAKCGVVSTTALSATTASNAMASLWSSCVVLPLLALTWMSAVLAMTDKRSILFQILFAVFDSLQGFVIVMVHCILRREVQDAFRCRLRNCQDPINADSSSSFPNGHAQIMTDFEKDVDIACRSVLHKDIGPCRAATITGTLSRISLNDDEEEKGTNPEGLSYSTLPGNVISKVIIQQPTGLHMPMSMNELSNPCLKKENTELRRTVYLCTDDNLRGADMDIVHPQERMMESDYIVMPRSSVSTQPSMKEESKMNIGMETLPHERLLHYKVNPEFNMNPPVMDQFNMNLDQHLAPQEHMQNLPFEPRTAVKNFMASELDDNVGLSRSETGSTISMSSLERRKSRYSDLDFEKVMHTRKRHMELFQELNQKFQTLDRFRDIPNTSSMENPAPNKNPWDTFKPPSEYQHYTTINVLDTEAKDTLELRPAEWEKCLNLPLDVQEGDFQTEV
name
Adgrb3 (ENSMUSG00000033569)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
CCDS:
CCDS14855.1
Uniprot/SWISSPROT:
Q80ZF8
RefSeq_peptide_predicted:
XP_006495880.1
UCSC:uc011wis.1
EMBL:
AC116556
EMBL:
AC117221
EMBL:
AC121828
EMBL:
AC122187
EMBL:
AC129314
EMBL:
AC140308
EMBL:
AY168406
EMBL:
CH466536
GO:
GO:0004930
GO:
GO:0005096
GO:
GO:0005515
GO:
GO:0005886
GO:
GO:0007166
GO:
GO:0007186
GO:
GO:0007520
GO:
GO:0016021
GO:
GO:0016525
GO:
GO:0043547
GO:
GO:0048814
GO:
GO:0051965
MGI_trans_name:
Adgrb3-201
goslim_goa:
GO:0003674
goslim_goa:
GO:0004871
goslim_goa:
GO:0005575
goslim_goa:
GO:0005623
goslim_goa:
GO:0005886
goslim_goa:
GO:0007165
goslim_goa:
GO:0008150
goslim_goa:
GO:0030154
goslim_goa:
GO:0030234
goslim_goa:
GO:0048646
goslim_goa:
GO:0048856
protein_id:
AAO27431.1
protein_id:
EDL14414.1
UniParc:
UPI00001ECF80
definition
note
: transcript_id=ENSMUST00000041838
protein_id
: ENSMUSP00000035612
translation
: MKAVRNLLIYIFSTYLLVMFGFNAAQDFWCSTLVKGVIYGSYSVSEMFPKNFTNCTWTLENPDPTKYSIYLKFSKKDLSCSNFSLLAYQFDHFSHEKIKDLLRKNHSIMQLCSSKNAFVFLQYDKNFIQIRRVFPTDFPGLQKKVEEDQKSFFEFLVLNKVSPSQFGCHVLCTWLESCLKSENGRTESCGIMYTKCTCPQHLGEWGIDDQSLVLLNNVVLPLNEQTEGCLTQELQTTQVCNLTREAKRPPKEEFGMMGDHTIKSQRPRSVHEKRVPQEQADAAKFMAQTGESGVEEWSQWSACSVTCGQGSQVRTRTCVSPYGTHCSGPLRESRVCNNTALCPVHGVWEEWSPWSLCSFTCGRGQRTRTRSCTPPQYGGRPCEGPETHHKPCNIALCPVDGQWQEWSSWSHCSVTCSNGTQQRSRQCTAAAHGGSECRGPWAESRECYNPECTANGQWNQWGHWSGCSKSCDGGWERRMRTCQGAAVTGQQCEGTGEEVRRCSEQRCPAPYEICPEDYLISMVWKRTPAGDLAFNQCPLNATGTTSRRCSLSLHGVASWEQPSFARCISNEYRHLQHSIKEHLAKGQRMLAGDGMSQVTKTLLDLTQRKNFYAGDLLVSVEILRNVTDTFKRASYIPASDGVQNFFQIVSNLLDEENKEKWEDAQQIYPGSIELMQVIEDFIHIVGMGMMDFQNSYLMTGNVVASIQKLPAASVLTDINFPMKGRKGMVDWARNSEDRVVIPKSIFTPVSSKELDESSVFVLGAVLYKNLDLILPTLRNYTVVNSKVIVVTIRPEPKTTDSFLEIELAHLANGTLNPYCVLWDDSKSNESLGTWSTQGCKTVLTDASHTKCLCDRLSTFAILAQQPREIVMESSGTPSVTLIVGSGLSCLALITLAVVYAALWRYIRSERSIILINFCLSIISSNILILVGQTQTHNKSICTTTTAFLHFFFLASFCWVLTEAWQSYMAVTGKIRTRLIRKRFLCLGWGLPALVVATSVGFTRTKGYGTDHYCWLSLEGGLLYAFVGPAAAVVLVNMVIGILVFNKLVSRDGILDKKLKHRAGQMSEPHSGLTLKCAKCGVVSTTALSATTASNAMASLWSSCVVLPLLALTWMSAVLAMTDKRSILFQILFAVFDSLQGFVIVMVHCILRREVQDAFRCRLRNCQDPINADSSSSFPNGHAQIMTDFEKDVDIACRSVLHKDIGPCRAATITGTLSRISLNDDEEEKGTNPEGLSYSTLPGNVISKVIIQQPTGLHMPMSMNELSNPCLKKENTELRRTVYLCTDDNLRGADMDIVHPQERMMESDYIVMPRSSVSTQPSMKEESKMNIGMETLPHERLLHYKVNPEFNMNPPVMDQFNMNLDQHLAPQEHMQNLPFEPRTAVKNFMASELDDNVGLSRSETGSTISMSSLERRKSRYSDLDFEKVMHTRKRHMELFQELNQKFQTLDRFRDIPNTSSMENPAPNKNPWDTFKPPSEYQHYTTINVLDTEAKDTLELRPAEWEKCLNLPLDVQEGDFQTEV
name
type
misc_feature
link
xref
definition
note
: contig AC129314.4 1..168932(-1)
name
Adgrb3 (ENSMUSG00000033569)
type
misc_RNA
link
VEGA
Ensembl
MGI
xref
Vega_transcript:
OTTMUST00000062408
Vega_transcript:
OTTMUST00000062408
MGI_trans_name:
Adgrb3-004
OTTT:
OTTMUST00000062408
definition
note
: retained_intron
note
: transcript_id=ENSMUST00000153568
Location
chromosome :
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
X
(Build: mm10)
view_point (b.p.) :
-
zoom in :
zoom out :
Picture width(pt) :
Colors
Annotation:
Gene
mRNA
CDS
genetic markers
Tracks
RefSeq genes :
not show
show
Gene, mRNA, CDS :
not show
show
MSM BAC end pairs :
not show
show
B6N BAC end pairs :
not show
show
MSMv4 :
not show
show
JF1v3 :
not show
show
KJRv1 :
not show
show
SWNv1 :
not show
show
CHDv1 :
not show
show
NJLv1 :
not show
show
BLG2v1 :
not show
show
HMIv1 :
not show
show
BFMv1 :
not show
show
PGNv1 :
not show
show
Click to browse alignment view.
BAC clone ordering.