VariantTable
SequenceCutter
Homology
search
Download
Updated genome
information
Help
& Docs
Previous ver
(NIG_MoG data)
Tutorials are available here.
Search for genomic variation
Search for mouse strain
BAC clone ordering.
cursor point :
On scale region : Click two point for zoom in view region.
On read coverage region : Click to browse alignment view.
name
Fars2 (ENSMUSG00000021420)
type
gene
link
VEGA
Ensembl
MGI
xref
definition
locus_tag
: Fars2
note
: phenylalanine-tRNA synthetase 2 (mitochondrial) [Source:MGI Symbol;Acc:MGI:1917205]
name
Fars2 (ENSMUSG00000021420)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000021857
name
Fars2 (ENSMUSG00000021420)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000099582
name
Fars2 (ENSMUSG00000021420)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
CCDS:
CCDS26453.1
Uniprot/SWISSPROT:
Q99M01
RefSeq_peptide:
NP_077236
RefSeq_mRNA:
NM_024274.3
RefSeq_mRNA_predicted:
XM_006516769
RefSeq_peptide_predicted:
XP_006516832.1
RefSeq_peptide_predicted:
XP_006516833.1
RefSeq_peptide_predicted:
XP_011242647.1
UCSC:uc007qck.2
Fantom:
2810431B21
Fantom:
F630215A18
EMBL:
AK013211
EMBL:
AK170986
EMBL:
BC002147
GO:
GO:0000049
GO:
GO:0000287
GO:
GO:0004826
GO:
GO:0005515
GO:
GO:0005524
GO:
GO:0005737
GO:
GO:0005739
GO:
GO:0005759
GO:
GO:0006432
GO:
GO:0008033
MGI_trans_name:
Fars2-201
goslim_goa:
GO:0003674
goslim_goa:
GO:0003723
goslim_goa:
GO:0005575
goslim_goa:
GO:0005622
goslim_goa:
GO:0005623
goslim_goa:
GO:0005737
goslim_goa:
GO:0005739
goslim_goa:
GO:0006399
goslim_goa:
GO:0006412
goslim_goa:
GO:0006520
goslim_goa:
GO:0008150
goslim_goa:
GO:0009058
goslim_goa:
GO:0016874
goslim_goa:
GO:0034641
goslim_goa:
GO:0043167
goslim_goa:
GO:0043226
goslim_goa:
GO:0044281
protein_id:
AAH02147.1
protein_id:
BAB28715.1
protein_id:
BAE42160.1
UniParc:
UPI0000021BDC
definition
note
: transcript_id=ENSMUST00000021857
protein_id
: ENSMUSP00000021857
translation
: MVCLALVRAAYEHIYLVRKVSHACRCHQHRAWSSKPAASQSAVQGAPGSVLEILGKSYPQDDHTNLTQKVLSKVGRNLHNQKFHPLWLIKERVKEHFYQQYMVRSRTPLFSVYDQLPPVVTTWQNFDSLLIPADHPSRKKGDNYYLNRAHMLRAHTSAHQWDLLHAGLNAFLVVGDVYRRDQIDCQHYPVFHQLEGVRLFSKHELFAGVKDGESLQLFEEGSRSAHKQETHTMEAVKLVEFDLKQVLTRLVTHLFGDGLEVRWVDCYFPFTHPSFEMEINFRGEWLEVLGCGVMEQQLVNSAGAQDRIGWAFGLGLERLAMVLYDIPDIRLFWSEDERFLKQFLLSDINQSVKFQPLSKYPAVFNDISFWLPSENYTENDFYDIVRTVGGDLVEKVDLIDKFEHPKTHRTSHCYRITYRHMERTLSQREVGNVHQAVQEAAVQLLGVEGRF
name
Fars2 (ENSMUSG00000021420)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
CCDS:
CCDS26454.1
RefSeq_peptide:
NP_001034278
RefSeq_mRNA:
NM_001039189.2
RefSeq_mRNA_predicted:
XM_006516772
RefSeq_peptide_predicted:
XP_006516835.1
Uniprot/SPTREMBL:
G3X9Q4
UCSC:uc007qcl.2
EMBL:
AC124562
EMBL:
AC140397
EMBL:
AC153151
EMBL:
CH466546
GO:
GO:0000049
GO:
GO:0000287
GO:
GO:0004826
GO:
GO:0005524
GO:
GO:0005737
GO:
GO:0005739
GO:
GO:0006432
GO:
GO:0008033
MGI_trans_name:
Fars2-202
goslim_goa:
GO:0003674
goslim_goa:
GO:0003723
goslim_goa:
GO:0005575
goslim_goa:
GO:0005622
goslim_goa:
GO:0005623
goslim_goa:
GO:0005737
goslim_goa:
GO:0005739
goslim_goa:
GO:0006399
goslim_goa:
GO:0006412
goslim_goa:
GO:0006520
goslim_goa:
GO:0008150
goslim_goa:
GO:0009058
goslim_goa:
GO:0016874
goslim_goa:
GO:0034641
goslim_goa:
GO:0043167
goslim_goa:
GO:0043226
goslim_goa:
GO:0044281
protein_id:
EDL40913.1
UniParc:
UPI000052CBCB
definition
note
: transcript_id=ENSMUST00000099582
protein_id
: ENSMUSP00000097177
translation
: MEAVKLVEFDLKQVLTRLVTHLFGDGLEVRWVDCYFPFTHPSFEMEINFRGEWLEVLGCGVMEQQLVNSAGAQDRIGWAFGLGLERLAMVLYDIPDIRLFWSEDERFLKQFLLSDINQSVKFQPLSKYPAVFNDISFWLPSENYTENDFYDIVRTVGGDLVEKVDLIDKFEHPKTHRTSHCYRITYRHMERTLSQREVGNVHQAVQEAAVQLLGVEGRF
name
type
misc_feature
link
xref
definition
note
: contig AC153151.4 86928..164635(1)
Location
chromosome :
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
X
(Build: mm10)
view_point (b.p.) :
-
zoom in :
zoom out :
Picture width(pt) :
Colors
Annotation:
Gene
mRNA
CDS
genetic markers
Tracks
RefSeq genes :
not show
show
Gene, mRNA, CDS :
not show
show
MSM BAC end pairs :
not show
show
B6N BAC end pairs :
not show
show
MSMv4 :
not show
show
JF1v3 :
not show
show
KJRv1 :
not show
show
SWNv1 :
not show
show
CHDv1 :
not show
show
NJLv1 :
not show
show
BLG2v1 :
not show
show
HMIv1 :
not show
show
BFMv1 :
not show
show
PGNv1 :
not show
show
Click to browse alignment view.
BAC clone ordering.