VariantTable
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name
Npas2 (ENSMUSG00000026077)
type
gene
link
VEGA
Ensembl
MGI
xref
definition
locus_tag
: Npas2
note
: neuronal PAS domain protein 2 [Source:MGI Symbol;Acc:MGI:109232]
name
Npas2 (ENSMUSG00000026077)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000173050
name
Npas2 (ENSMUSG00000026077)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000056815
name
Npas2 (ENSMUSG00000026077)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
Vega_transcript:
Npas2-002
Vega_transcript:
OTTMUST00000094904
Uniprot/SPTREMBL:
G3UYV8
EMBL:
AC132571
EMBL:
AC142106
GO:
GO:0003677
GO:
GO:0005634
GO:
GO:0005667
GO:
GO:0042745
GO:
GO:0045475
GO:
GO:0045739
GO:
GO:0045893
GO:
GO:0045944
GO:
GO:0046983
GO:
GO:0051775
GO:
GO:0051879
GO:
GO:0060548
GO:
GO:2001020
MGI_trans_name:
Npas2-002
Vega_translation:
179086
Vega_translation:
OTTMUSP00000052907
goslim_goa:
GO:0003674
goslim_goa:
GO:0003677
goslim_goa:
GO:0005575
goslim_goa:
GO:0005622
goslim_goa:
GO:0005623
goslim_goa:
GO:0005634
goslim_goa:
GO:0008150
goslim_goa:
GO:0043226
goslim_goa:
GO:0043234
OTTP:
OTTMUSP00000052907
OTTT:
OTTMUST00000094904
UniParc:
UPI00021CF75D
definition
note
: transcript_id=ENSMUST00000173050
protein_id
: ENSMUSP00000134241
translation
: MDEDEKDRAKRASRNKSEKKRRDQFNVLIKELSSMLPGNTRKMDKTTVLEKVIGFLQKHN
name
Npas2 (ENSMUSG00000026077)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
CCDS:
CCDS48244.1
RefSeq_peptide:
NP_032745
RefSeq_mRNA:
NM_008719.2
RefSeq_peptide_predicted:
XP_011236754.1
Vega_transcript:
Npas2-001
Vega_transcript:
OTTMUST00000094905
Uniprot/SPTREMBL:
G3X9B7
UCSC:uc007atd.2
EMBL:
AC132571
EMBL:
AC142106
EMBL:
CH466536
GO:
GO:0003677
GO:
GO:0003677
GO:
GO:0003700
GO:
GO:0005515
GO:
GO:0005634
GO:
GO:0005634
GO:
GO:0005667
GO:
GO:0005667
GO:
GO:0005737
GO:
GO:0006351
GO:
GO:0042745
GO:
GO:0045475
GO:
GO:0045739
GO:
GO:0045739
GO:
GO:0045893
GO:
GO:0045893
GO:
GO:0045944
GO:
GO:0045944
GO:
GO:0046983
GO:
GO:0051775
GO:
GO:0051775
GO:
GO:0051879
GO:
GO:0051879
GO:
GO:0060548
GO:
GO:0060548
GO:
GO:2001020
GO:
GO:2001020
MGI_trans_name:
Npas2-001
Vega_translation:
179087
Vega_translation:
OTTMUSP00000052908
goslim_goa:
GO:0001071
goslim_goa:
GO:0003674
goslim_goa:
GO:0003677
goslim_goa:
GO:0005575
goslim_goa:
GO:0005622
goslim_goa:
GO:0005623
goslim_goa:
GO:0005634
goslim_goa:
GO:0005737
goslim_goa:
GO:0008150
goslim_goa:
GO:0009058
goslim_goa:
GO:0034641
goslim_goa:
GO:0043226
goslim_goa:
GO:0043234
protein_id:
EDL14555.1
OTTP:
OTTMUSP00000052908
OTTT:
OTTMUST00000094905
UniParc:
UPI000058AE75
definition
note
: transcript_id=ENSMUST00000056815
protein_id
: ENSMUSP00000054719
translation
: MDEDEKDRAKRASRNKSEKKRRDQFNVLIKELSSMLPGNTRKMDKTTVLEKVIGFLQKHNEVSAQTEICDIQQDWKPSFLSNEEFTQLMLEALDGFVIVVTTDGSIIYVSDSITPLLGHLPADVMDQNLLNFLPEQEHSEVYKILSSHMLVTDSPSPEFLKSDNDLEFYCHLLRGSLNPKEFPTYEYIKFVGNFRSYNNVPSPSCNGFDNTLSRPCHVPLGKDVCFIATVRLATPQFLKEMCVADEPLEEFTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHIDDLELLARCHQHLMQFGKGKSCCYRFLTKGQQWIWLQTHYYITYHQWNSKPEFIVCTHSVVSYADVRVERRQELALEDPPTEAMHPSAVKEKDSSLEPPQPFNALDMGASGLPSSPSPSASSRSSHKSSHTAMSEPTSTPTKLMAENSTTALPRPATLPQELPVQGLSQAATMPTALHSSASCDLTKQLLLQSLPQTGLQSPPAPVTQFSAQFSMFQTIKDQLEQRTRILQANIRWQQEELHKIQEQLCLVQDSNVQMFLQQPAVSLSFSSTQRPAAQQQLQQRPAAPSQPQLVVNTPLQGQITSTQVTNQHLLRESNVISAQGPKPMRSSQLLPASGRSLSSLPSQFSSTASVLPPGLSLTTIAPTPQDDSQCQPSPDFGHDRQLRLLLSQPIQPMMPGSCDARQPSEVSRTGRQVKYAQSQVMFPSPDSHPTNSSASTPVLLMGQAVLHPSFPASRPSPLQPAQAQQQPPPYLQAPTSLHSEQPDSLLLSTFSQQPGTLGYAATQSTPPQPPRPSRRVSRLSES
name
type
misc_feature
link
xref
definition
note
: contig AC132571.2 1..155527(-1)
Location
chromosome :
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
X
(Build: mm10)
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Colors
Annotation:
Gene
mRNA
CDS
genetic markers
Tracks
RefSeq genes :
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Gene, mRNA, CDS :
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show
MSM BAC end pairs :
not show
show
B6N BAC end pairs :
not show
show
MSMv4 :
not show
show
JF1v3 :
not show
show
KJRv1 :
not show
show
SWNv1 :
not show
show
CHDv1 :
not show
show
NJLv1 :
not show
show
BLG2v1 :
not show
show
HMIv1 :
not show
show
BFMv1 :
not show
show
PGNv1 :
not show
show
Click to browse alignment view.
BAC clone ordering.