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name
Sncb (ENSMUSG00000034891)
type
gene
link
VEGA
Ensembl
MGI
xref
definition
locus_tag
: Sncb
note
: synuclein, beta [Source:MGI Symbol;Acc:MGI:1889011]
name
Sncb (ENSMUSG00000034891)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000036825
name
Sncb (ENSMUSG00000034891)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000134110
name
Sncb (ENSMUSG00000034891)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
CCDS:
CCDS36670.1
Uniprot/SWISSPROT:
Q91ZZ3
RefSeq_peptide:
NP_291088
RefSeq_mRNA:
NM_033610.2
RefSeq_peptide_predicted:
XP_006517078.1
RefSeq_peptide_predicted:
XP_006517079.1
Vega_transcript:
OTTMUST00000081255
Vega_transcript:
Sncb-001
UCSC:uc007qpc.1
EMBL:
AF348162
EMBL:
AF348163
EMBL:
AF348164
EMBL:
BC019409
GO:
GO:0005509
GO:
GO:0005509
GO:
GO:0005654
GO:
GO:0005654
GO:
GO:0005737
GO:
GO:0005737
GO:
GO:0005739
GO:
GO:0005794
GO:
GO:0005794
GO:
GO:0007268
GO:
GO:0016234
GO:
GO:0016234
GO:
GO:0042417
GO:
GO:0043524
GO:
GO:0045202
GO:
GO:0050808
MGI_trans_name:
Sncb-001
Vega_translation:
214522
Vega_translation:
OTTMUSP00000043434
goslim_goa:
GO:0003674
goslim_goa:
GO:0005575
goslim_goa:
GO:0005622
goslim_goa:
GO:0005623
goslim_goa:
GO:0005634
goslim_goa:
GO:0005654
goslim_goa:
GO:0005737
goslim_goa:
GO:0005739
goslim_goa:
GO:0005794
goslim_goa:
GO:0007267
goslim_goa:
GO:0008150
goslim_goa:
GO:0043167
goslim_goa:
GO:0043226
protein_id:
AAH19409.1
protein_id:
AAK83238.1
OTTP:
OTTMUSP00000043434
OTTT:
OTTMUST00000081255
UniParc:
UPI00000298C2
definition
note
: transcript_id=ENSMUST00000036825
protein_id
: ENSMUSP00000043074
translation
: MDVFMKGLSMAKEGVVAAAEKTKQGVTEAAEKTKEGVLYVGSKTSGVVQGVASVAEKTKEQASHLGGAVFSGAGNIAAATGLVKKEEFPTDLKPEEVAQEAAEEPLIEPLMEPEGESYEDSPQEEYQEYEPEA
name
Sncb (ENSMUSG00000034891)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
CCDS:
CCDS36670.1
Uniprot/SWISSPROT:
Q91ZZ3
RefSeq_peptide_predicted:
XP_006517078.1
RefSeq_peptide_predicted:
XP_006517079.1
Vega_transcript:
OTTMUST00000081258
Vega_transcript:
Sncb-004
UCSC:uc007qpc.1
EMBL:
AF348162
EMBL:
AF348163
EMBL:
AF348164
EMBL:
BC019409
GO:
GO:0005509
GO:
GO:0005654
GO:
GO:0005737
GO:
GO:0005739
GO:
GO:0005794
GO:
GO:0007268
GO:
GO:0016234
GO:
GO:0042417
GO:
GO:0043524
GO:
GO:0045202
GO:
GO:0050808
MGI_trans_name:
Sncb-004
Vega_translation:
214523
Vega_translation:
OTTMUSP00000043435
goslim_goa:
GO:0003674
goslim_goa:
GO:0005575
goslim_goa:
GO:0005622
goslim_goa:
GO:0005623
goslim_goa:
GO:0005634
goslim_goa:
GO:0005654
goslim_goa:
GO:0005737
goslim_goa:
GO:0005739
goslim_goa:
GO:0005794
goslim_goa:
GO:0007267
goslim_goa:
GO:0008150
goslim_goa:
GO:0043167
goslim_goa:
GO:0043226
protein_id:
AAH19409.1
protein_id:
AAK83238.1
OTTP:
OTTMUSP00000043435
OTTT:
OTTMUST00000081258
UniParc:
UPI00000298C2
definition
note
: transcript_id=ENSMUST00000134110
protein_id
: ENSMUSP00000116296
translation
: MDVFMKGLSMAKEGVVAAAEKTKQGVTEAAEKTKEGVLYVGSKTSGVVQGVASVAEKTKEQASHLGGAVFSGAGNIAAATGLVKKEEFPTDLKPEEVAQEAAEEPLIEPLMEPEGESYEDSPQEEYQEYEPEA
name
type
misc_feature
link
xref
definition
note
: contig AC162526.3 61529..219418(1)
name
Sncb (ENSMUSG00000034891)
type
misc_RNA
link
VEGA
Ensembl
MGI
xref
Vega_transcript:
OTTMUST00000081256
Vega_transcript:
OTTMUST00000081256
MGI_trans_name:
Sncb-002
OTTT:
OTTMUST00000081256
definition
note
: retained_intron
note
: transcript_id=ENSMUST00000153829
Location
chromosome :
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
X
(Build: mm10)
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Annotation:
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CDS
genetic markers
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RefSeq genes :
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Gene, mRNA, CDS :
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MSM BAC end pairs :
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B6N BAC end pairs :
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MSMv4 :
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JF1v3 :
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KJRv1 :
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SWNv1 :
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CHDv1 :
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NJLv1 :
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show
BLG2v1 :
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show
HMIv1 :
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show
BFMv1 :
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PGNv1 :
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Click to browse alignment view.
BAC clone ordering.