MoG+ -Mouse Genome database with high added value-

Target CDS Information

Gene Symbol (Gene ID)

Rhbdd3 (ENSMUSG00000034175)

Cross Reference

CCDS	CCDS24397.1
EMBL	AK077457, AK156451, AL645845, ...show all
Fantom	5730411O18, F830022F09
GO	GO:0000165, GO:0001889, GO:0002673, ...show all
goslim_goa	GO:0003674, GO:0005575, GO:0005622, ...show all
MGI_trans_name	Rhbdd3-201
protein_id	AAH96693.1, AAI32460.1, AAI38480.1, ...show all
RefSeq_mRNA	NM_001290493.1
RefSeq_peptide	NP_001277422
RefSeq_peptide_predicted	XP_006514777.1, XP_006514778.1

UCSC	uc007hwe.2
UniParc	UPI00000EB0DD
Uniprot/SPTREMBL	B7ZNJ8
Uniprot/SWISSPROT	Q8BP97

Definition

protein_id:ENSMUSP00000105504
translation:

MHAWEAPGSLSRALPLASSVLMLLLSCLWLLGAGPSLRLAPELLMEPWQVHRLLTHALGH
TALPGLLLSLLLLPTLGWWQECHLGTVRFLHNSTVLALATGLLAVLLAGLGVSGAAGGCG
YMPVHLAMLAGQSHHPGWPQRTLPPWLLPWLLLALTLLLSSEPPFLQLLCGLLTGLAYAA
GAFQWLELSEQRLQVLQEGVLCKSLARCWPLRLFPTPGSLGELPVTYPAGVRPATPRPPY
LASSDSWPHSDGSAQLPPRLGPGQLTWKNSERGLDWAGSSFASATTMWAALDEQMLQEGI
QASLLDVSVQGSQSSLWLPKPSVSSLRLQQLQHMGFPTEQAAVALAATGRVEGAVSLLVE
GLVDTEALVTEGRSSPAHCTGTGAS

Chromosome

Length
Position(start - end)

2774
5103202 - 5105977

Orient to Chromosome

plus

Link

Location : (11:5103202-5105977)
/

Detail Map

name	Ewsr1 (ENSMUSG00000009079)
type	gene
link	VEGA Ensembl MGI
xref
definition	locus_tag : Ewsr1 note : Ewing sarcoma breakpoint region 1 [Source:MGI Symbol;Acc:MGI:99960]

name	Rhbdd3 (ENSMUSG00000034175)
type	gene
link	VEGA Ensembl MGI
xref
definition	locus_tag : Rhbdd3 note : rhomboid domain containing 3 [Source:MGI Symbol;Acc:MGI:2444684]

name	Emid1 (ENSMUSG00000034164)
type	gene
link	VEGA Ensembl MGI
xref
definition	locus_tag : Emid1 note : EMI domain containing 1 [Source:MGI Symbol;Acc:MGI:2155091]

name	Ewsr1 (ENSMUSG00000009079)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000079949

name	Ewsr1 (ENSMUSG00000009079)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000073308

name	Ewsr1 (ENSMUSG00000009079)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000102930

name	Ewsr1 (ENSMUSG00000009079)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000093365

name	Ewsr1 (ENSMUSG00000009079)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000063232

name	Rhbdd3 (ENSMUSG00000034175)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000101610

name	Rhbdd3 (ENSMUSG00000034175)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000134267

name	Rhbdd3 (ENSMUSG00000034175)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000036320

name	Rhbdd3 (ENSMUSG00000034175)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000150632

name	Rhbdd3 (ENSMUSG00000034175)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000139742

name	Rhbdd3 (ENSMUSG00000034175)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000109878

name	Rhbdd3 (ENSMUSG00000034175)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000148761

name	Emid1 (ENSMUSG00000034164)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000062821

name	Emid1 (ENSMUSG00000034164)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000132328

name	Emid1 (ENSMUSG00000034164)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000163299

name	Emid1 (ENSMUSG00000034164)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000151906

name	Emid1 (ENSMUSG00000034164)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000153308

name	Ewsr1 (ENSMUSG00000009079) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	CCDS:CCDS24396.1 Uniprot/SWISSPROT:Q61545 RefSeq_peptide:NP_001269990.1 RefSeq_peptide:NP_031994 RefSeq_mRNA:NM_001283061.1 RefSeq_mRNA:NM_007968.3 RefSeq_mRNA_predicted:XM_006514508.2 RefSeq_mRNA_predicted:XM_006514509.2 RefSeq_mRNA_predicted:XM_006514510.2 RefSeq_mRNA_predicted:XM_006514511.2 RefSeq_mRNA_predicted:XM_006514512.2 RefSeq_peptide_predicted:XP_006514571.1 RefSeq_peptide_predicted:XP_006514572.1 RefSeq_peptide_predicted:XP_006514573.1 RefSeq_peptide_predicted:XP_006514574.1 RefSeq_peptide_predicted:XP_006514575.1 Vega_transcript:Ewsr1-002 Vega_transcript:OTTMUST00000011341 UCSC:uc007hvw.2 Fantom:3830417B11 Fantom:I830032F18 EMBL:AK019460 EMBL:AK151625 EMBL:AL645845 EMBL:CH466574 EMBL:X79233 GO:GO:0000166 GO:GO:0005515 GO:GO:0005515 GO:GO:0005516 GO:GO:0005634 GO:GO:0005634 GO:GO:0005654 GO:GO:0005730 GO:GO:0005737 GO:GO:0005886 GO:GO:0006351 GO:GO:0006355 GO:GO:0008270 GO:GO:0042802 GO:GO:0044822 MGI_trans_name:Ewsr1-002 Vega_translation:208997 Vega_translation:OTTMUSP00000005285 goslim_goa:GO:0003674 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0005737 goslim_goa:GO:0005886 goslim_goa:GO:0008150 goslim_goa:GO:0009058 goslim_goa:GO:0034641 goslim_goa:GO:0043167 goslim_goa:GO:0043226 protein_id:BAB31732.1 protein_id:BAE30560.1 protein_id:CAA55815.1 protein_id:CAI25231.1 protein_id:EDL40519.1 OTTP:OTTMUSP00000005285 OTTT:OTTMUST00000011341 UniParc:UPI00000E8A5F
definition	note : transcript_id=ENSMUST00000079949 protein_id : ENSMUSP00000078867 translation : MASTDYSTYSQAAAQQGYSAYTAQPTQGYAQTTQAYGQQSYGTYGQPTDVSYTQAQTTATYGQTAYATSYGQPPTGYSTPTAPQAYSQPVQGYGTGTYDSTTATVTTTQASYAAQTAYGTQPAYPTYGQQPTATAPTRPQDGNKPAETSQPQSSTGGYNQPSLGYGQSNYSYPQVPGSYPMQPVTAPPSYPPTSYSSSQPTSYDQSSYSQQNTYGQPSSYGQQSSYGQQSSYGQQPPTSYPPQTGSYSQAPSQYSQQSSSYGQQSSFRQDHPSSMGVYGQESGGFSGPGENRSLSGPDNRGRGRGGFDRGGMSRGGRGGGRGGLGAGERGGFNKPGGPMDEGPDLDLGLPIDPDEDSDNSAIYVQGLNDNVTLDDLADFFKQCGVVKMNKRTGQPMIHIYLDKETGKPKGDATVSYEDPPTAKAAVEWFDGKDFQGSKLKVSLARKKPPMNSMRGGMPPREGRGMPPPLRGGPGGPGGPGGPMGRMGGRGGDRGGFPPRGPRGSRGNPSGGGNVQHRAGDWQCPNPGCGNQNFAWRTECNQCKAPKPEGFLPPPFPPPGGDRGRGGPGGMRGGRGGLMDRGGPGGMFRGGRGGDRGGFRGGRGMDRGGFGGGRRGGPGGPPGPLMEQMGGRRGGRGGPGKMDKGEHRQERRDRPY

name	Ewsr1 (ENSMUSG00000009079) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	CCDS:CCDS70131.1 RefSeq_peptide:NP_001269991 RefSeq_mRNA:NM_001283062.1 Vega_transcript:Ewsr1-007 Vega_transcript:OTTMUST00000011346 Uniprot/SPTREMBL:Q5SUT0 UCSC:uc007hvy.2 EMBL:AL645845 GO:GO:0000166 GO:GO:0003676 GO:GO:0005634 GO:GO:0008270 MGI_trans_name:Ewsr1-007 Vega_translation:208999 Vega_translation:OTTMUSP00000005287 goslim_goa:GO:0003674 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0043167 goslim_goa:GO:0043226 OTTP:OTTMUSP00000005287 OTTT:OTTMUST00000011346 UniParc:UPI0000470512
definition	note : transcript_id=ENSMUST00000073308 protein_id : ENSMUSP00000073034 translation : MASTDYSTYSQAAAQQGYSAYTAQPTQGYAQTTQAYGQQSYGTYGQPTDVSYTQAQTTATYGQTAYATSYGQPPTGYSTPTAPQAYSQPVQGYGTGTYDSTTATVTTTQASYAAQTAYGTQPAYPTYGQQPTATAPTRPQDGNKPAETSQPQSSTGGYNQPSLGYGQSNYSYPQVPGSYPMQPVTAPPSYPPTSYSSSQPTSYDQSSYSQQNTYGQPSSYGQQSSYGQQSSYGQQPPTSYPPQTGSYSQAPSQYSQQSSSYGQQSSFRQDHPSSMGVYGQESGGFSGPGENRSLSGPDNRGRGRGGFDRGGMSRDPDEDSDNSAIYVQGLNDNVTLDDLADFFKQCGVVKMNKRTGQPMIHIYLDKETGKPKGDATVSYEDPPTAKAAVEWFDGKDFQGSKLKVSLARKKPPMNSMRGGMPPREGRGMPPPLRGGPGGPGGPGGPMGRMGGRGGDRGGFPPRGPRGSRGNPSGGGNVQHRAGDWQCPNPGCGNQNFAWRTECNQCKAPKPEGFLPPPFPPPGGDRGRGGPGGMRGGRGGLMDRGGPGGMFRGGRGGDRGGFRGGRGMDRGGFGGGRRGGPGGPPGPLMEQMGGRRGGRGGPGKMDKGEHRQERRDRPY

name	Ewsr1 (ENSMUSG00000009079) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:Ewsr1-009 Vega_transcript:OTTMUST00000011348 Uniprot/SPTREMBL:Q5SUS9 UCSC:uc007hvw.2 EMBL:AL645845 GO:GO:0000166 GO:GO:0003676 GO:GO:0005634 GO:GO:0008270 MGI_trans_name:Ewsr1-009 Vega_translation:209000 Vega_translation:OTTMUSP00000005288 goslim_goa:GO:0003674 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0043167 goslim_goa:GO:0043226 OTTP:OTTMUSP00000005288 OTTT:OTTMUST00000011348 UniParc:UPI0000470513
definition	note : transcript_id=ENSMUST00000102930 protein_id : ENSMUSP00000099994 translation : MASTDYSTYSQAAAQQGYSAYTAQPTQGYAQTTQAYGQQSYGTYGQPTDVSYTQAQTTATYGQTAYATSYGQPPTVEGTSTGYSTPTAPQAYSQPVQGYGTGTYDSTTATVTTTQASYAAQTAYGTQPAYPTYGQQPTATAPTRPQDGNKPAETSQPQSSTGGYNQPSLGYGQSNYSYPQVPGSYPMQPVTAPPSYPPTSYSSSQPTSYDQSSYSQQNTYGQPSSYGQQSSYGQQSSYGQQPPTSYPPQTGSYSQAPSQYSQQSSSYGQQSSFRQDHPSSMGVYGQESGGFSGPGENRSLSGPDNRGRGRGGFDRGGMSRGGRGGGRGGLGAGERGGFNKPGGPMDEGPDLDLGLPIDPDEDSDNSAIYVQGLNDNVTLDDLADFFKQCGVVKMNKRTGQPMIHIYLDKETGKPKGDATVSYEDPPTAKAAVEWFDGKDFQGSKLKVSLARKKPPMNSMRGGMPPREGRGMPPPLRGGPGGPGGPGGPMGRMGGRGGDRGGFPPRGPRGSRGNPSGGGNVQHRAGDWQCPNPGCGNQNFAWRTECNQCKAPKPEGFLPPPFPPPGGDRGRGGPGGMRGGRGGLMDRGGPGGMFRGGRGGDRGGFRGGRGMDRGGFGGGRRGGPGGPPGPLMEQMGGRRGGRGGPGKMDKGEHRQERRDRPY

name	Ewsr1 (ENSMUSG00000009079) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	RefSeq_peptide:NP_001269992.1 RefSeq_mRNA:NM_001283063.1 RefSeq_peptide_predicted:XP_006514576.1 Vega_transcript:Ewsr1-004 Vega_transcript:OTTMUST00000011343 Uniprot/SPTREMBL:Q5SUS8 UCSC:uc007hvz.2 EMBL:AL645845 GO:GO:0005634 MGI_trans_name:Ewsr1-004 Vega_translation:208998 Vega_translation:OTTMUSP00000005286 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0043226 OTTP:OTTMUSP00000005286 OTTT:OTTMUST00000011343 UniParc:UPI0000470514
definition	note : transcript_id=ENSMUST00000093365 protein_id : ENSMUSP00000091057 translation : MASTDYSTYSQAAAQQGYSAYTAQPTQGYAQTTQAYGQQSYGTYGQPTDVSYTQAQTTATYGQTAYATSYGQPPTGYSTPTAPQAYSQPVQGYGTGTYDSTTATVTTTQASYAAQTAYGTQPAYPTYGQQPTATAPTRPQDGNKPAETSQPQSSTGGYNQPSLGYGQSNYSYPQVPGSYPMQPVTAPPSYPPTSYSSSQPTSYDQSSYSQQNTYGQPSSYGQQSSYGQQSSYGQQPPTSYPPQTGSYSQAPSQYSQQSSSYGQQSSFRQDHPSSMGVYGQESGGFSGPGENRSLSGPDNRGRGRGGFDRGGMSRGGRGGGRGGLGLQSESLVYTSILKKYPYSVLSRQHNEKWD

name	Ewsr1 (ENSMUSG00000009079) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:Ewsr1-010 Vega_transcript:OTTMUST00000011349 Uniprot/SPTREMBL:Q8BQU4 UCSC:uc007hwa.2 Fantom:B230384I08 EMBL:AK046434 EMBL:AL645845 GO:GO:0005634 MGI_trans_name:Ewsr1-010 Vega_translation:209001 Vega_translation:OTTMUSP00000005289 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0043226 protein_id:BAC32727.1 OTTP:OTTMUSP00000005289 OTTT:OTTMUST00000011349 UniParc:UPI00000EAEDD
definition	note : transcript_id=ENSMUST00000063232 protein_id : ENSMUSP00000066827 translation : MASTDYSTYSQAAAQQGYSAYTAQPTQGYAQTTQAYGQQSYGTYGQPTDVSYTQAQTTATYGQTAYATSYGQPPTVEGTSTGLTILLILAWELLSILSNPVMLTLRCFHLFKP

name	Rhbdd3 (ENSMUSG00000034175) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	CCDS:CCDS24397.1 Uniprot/SWISSPROT:Q8BP97 RefSeq_peptide:NP_001277421 RefSeq_peptide:NP_796344 RefSeq_mRNA:NM_001290492.1 RefSeq_mRNA:NM_177370.4 RefSeq_peptide_predicted:XP_006514777.1 RefSeq_peptide_predicted:XP_006514778.1 Vega_transcript:OTTMUST00000011353 Vega_transcript:Rhbdd3-001 Uniprot/SPTREMBL:B7ZNJ8 UCSC:uc007hwb.2 Fantom:5730411O18 Fantom:F830022F09 EMBL:AK077457 EMBL:AK156451 EMBL:AL645845 EMBL:BC096693 EMBL:BC132459 EMBL:BC138479 EMBL:BC145287 EMBL:BC145289 EMBL:CH466574 GO:GO:0000165 GO:GO:0001889 GO:GO:0002673 GO:GO:0004252 GO:GO:0005515 GO:GO:0005622 GO:GO:0006508 GO:GO:0009410 GO:GO:0016021 GO:GO:0032815 GO:GO:0045732 GO:GO:0050708 MGI_trans_name:Rhbdd3-001 Vega_translation:209002 Vega_translation:OTTMUSP00000005290 goslim_goa:GO:0003674 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0006464 goslim_goa:GO:0007165 goslim_goa:GO:0008150 goslim_goa:GO:0008233 goslim_goa:GO:0048856 protein_id:AAH96693.1 protein_id:AAI32460.1 protein_id:AAI38480.1 protein_id:AAI45288.1 protein_id:AAI45290.1 protein_id:BAC36809.1 protein_id:BAE33717.1 protein_id:CAI25240.1 protein_id:CAI25241.1 protein_id:CAI25242.1 protein_id:EDL40522.1 OTTP:OTTMUSP00000005290 OTTT:OTTMUST00000011353 UniParc:UPI00000EB0DD
definition	note : transcript_id=ENSMUST00000101610 protein_id : ENSMUSP00000099131 translation : MHAWEAPGSLSRALPLASSVLMLLLSCLWLLGAGPSLRLAPELLMEPWQVHRLLTHALGHTALPGLLLSLLLLPTLGWWQECHLGTVRFLHNSTVLALATGLLAVLLAGLGVSGAAGGCGYMPVHLAMLAGQSHHPGWPQRTLPPWLLPWLLLALTLLLSSEPPFLQLLCGLLTGLAYAAGAFQWLELSEQRLQVLQEGVLCKSLARCWPLRLFPTPGSLGELPVTYPAGVRPATPRPPYLASSDSWPHSDGSAQLPPRLGPGQLTWKNSERGLDWAGSSFASATTMWAALDEQMLQEGIQASLLDVSVQGSQSSLWLPKPSVSSLRLQQLQHMGFPTEQAAVALAATGRVEGAVSLLVEGLVDTEALVTEGRSSPAHCTGTGAS

name	Rhbdd3 (ENSMUSG00000034175) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000011357 Vega_transcript:Rhbdd3-005 Uniprot/SPTREMBL:Q5SUT8 EMBL:AL645845 GO:GO:0000165 GO:GO:0001889 GO:GO:0002673 GO:GO:0005515 GO:GO:0005622 GO:GO:0009410 GO:GO:0032815 GO:GO:0045732 GO:GO:0050708 MGI_trans_name:Rhbdd3-005 Vega_translation:209006 Vega_translation:OTTMUSP00000005294 goslim_goa:GO:0003674 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0006464 goslim_goa:GO:0007165 goslim_goa:GO:0008150 goslim_goa:GO:0048856 OTTP:OTTMUSP00000005294 OTTT:OTTMUST00000011357 UniParc:UPI0000470517
definition	note : transcript_id=ENSMUST00000134267 protein_id : ENSMUSP00000118085 translation : MHAWEAPGSLSRALPLASSVLMLLLSCLWLLGAGPSLRLAPELLMEPWQ

name	Rhbdd3 (ENSMUSG00000034175) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	CCDS:CCDS70133.1 Uniprot/SWISSPROT:Q8BP97 RefSeq_peptide:NP_001277420 RefSeq_mRNA:NM_001290491.1 RefSeq_mRNA_predicted:XM_006514717 Vega_transcript:OTTMUST00000011354 Vega_transcript:Rhbdd3-002 UCSC:uc007hwd.2 Fantom:5730411O18 Fantom:F830022F09 EMBL:AK077457 EMBL:AK156451 EMBL:AL645845 EMBL:BC096693 EMBL:BC132459 EMBL:BC145289 GO:GO:0000165 GO:GO:0001889 GO:GO:0002673 GO:GO:0004252 GO:GO:0005515 GO:GO:0005622 GO:GO:0006508 GO:GO:0009410 GO:GO:0016021 GO:GO:0032815 GO:GO:0045732 GO:GO:0050708 MGI_trans_name:Rhbdd3-002 Vega_translation:209003 Vega_translation:OTTMUSP00000005291 goslim_goa:GO:0003674 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0006464 goslim_goa:GO:0007165 goslim_goa:GO:0008150 goslim_goa:GO:0008233 goslim_goa:GO:0048856 protein_id:AAH96693.1 protein_id:AAI32460.1 protein_id:AAI45290.1 protein_id:BAC36809.1 protein_id:BAE33717.1 protein_id:CAI25240.1 protein_id:CAI25241.1 protein_id:CAI25242.1 OTTP:OTTMUSP00000005291 OTTT:OTTMUST00000011354 UniParc:UPI000047051A
definition	note : transcript_id=ENSMUST00000036320 protein_id : ENSMUSP00000044703 translation : MHAWEAPGSLSRALPLASSVLMLLLSCLWLLGAGPSLRLAPELLMEPWQVHRLLTHALGHTALPGLLLSLLLLPTLGWWQECHLGTVRFLHNSTVLALATGLLAVLLAGLGVSGAAGGCGYMPVHLAMLAGQSHHPGWPQRTLPPWLLPWLLLALTLLLSSEPPFLQLLCGLLTGLACRCCWGLPVAGALRAETAGVTGRCPLQVSGPMLAAEALSHPGQSGPATPRPPYLASSDSWPHSDGSAQLPPRLGPGQLTWKNSERGLDWAGSSFASATTMWAALDEQMLQEGIQASLLDVSVQGSQSSLWLPKPSVSSLRLQQLQHMGFPTEQAAVALAATGRVEGAVSLLVEGLVDTEALVTEGRSSPAHCTGTGAS

name	Rhbdd3 (ENSMUSG00000034175) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000011355 Vega_transcript:Rhbdd3-003 Uniprot/SPTREMBL:Q5SUU0 GO:GO:0000165 GO:GO:0001889 GO:GO:0002673 GO:GO:0005515 GO:GO:0005622 GO:GO:0009410 GO:GO:0032815 GO:GO:0045732 GO:GO:0050708 MGI_trans_name:Rhbdd3-003 Vega_translation:209004 Vega_translation:OTTMUSP00000005292 goslim_goa:GO:0003674 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0006464 goslim_goa:GO:0007165 goslim_goa:GO:0008150 goslim_goa:GO:0048856 OTTP:OTTMUSP00000005292 OTTT:OTTMUST00000011355 UniParc:UPI0000470515
definition	note : transcript_id=ENSMUST00000150632 protein_id : ENSMUSP00000119972 translation : MHAWEAPGSLSRALPLA

name	Rhbdd3 (ENSMUSG00000034175) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000011358 Vega_transcript:Rhbdd3-006 Uniprot/SPTREMBL:Q5SUT9 EMBL:AL645845 GO:GO:0000165 GO:GO:0001889 GO:GO:0002673 GO:GO:0005515 GO:GO:0005622 GO:GO:0009410 GO:GO:0032815 GO:GO:0045732 GO:GO:0050708 MGI_trans_name:Rhbdd3-006 Vega_translation:209007 Vega_translation:OTTMUSP00000005295 goslim_goa:GO:0003674 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0006464 goslim_goa:GO:0007165 goslim_goa:GO:0008150 goslim_goa:GO:0048856 OTTP:OTTMUSP00000005295 OTTT:OTTMUST00000011358 UniParc:UPI0000470516
definition	note : transcript_id=ENSMUST00000139742 protein_id : ENSMUSP00000116703 translation : MHAWEAPGSLSRALPLASS

name	Rhbdd3 (ENSMUSG00000034175) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	CCDS:CCDS24397.1 Uniprot/SWISSPROT:Q8BP97 RefSeq_peptide:NP_001277422 RefSeq_mRNA:NM_001290493.1 RefSeq_peptide_predicted:XP_006514777.1 RefSeq_peptide_predicted:XP_006514778.1 Uniprot/SPTREMBL:B7ZNJ8 UCSC:uc007hwe.2 Fantom:5730411O18 Fantom:F830022F09 EMBL:AK077457 EMBL:AK156451 EMBL:AL645845 EMBL:BC096693 EMBL:BC132459 EMBL:BC138479 EMBL:BC145287 EMBL:BC145289 EMBL:CH466574 GO:GO:0000165 GO:GO:0001889 GO:GO:0002673 GO:GO:0004252 GO:GO:0005515 GO:GO:0005622 GO:GO:0006508 GO:GO:0009410 GO:GO:0016021 GO:GO:0032815 GO:GO:0045732 GO:GO:0050708 MGI_trans_name:Rhbdd3-201 goslim_goa:GO:0003674 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0006464 goslim_goa:GO:0007165 goslim_goa:GO:0008150 goslim_goa:GO:0008233 goslim_goa:GO:0048856 protein_id:AAH96693.1 protein_id:AAI32460.1 protein_id:AAI38480.1 protein_id:AAI45288.1 protein_id:AAI45290.1 protein_id:BAC36809.1 protein_id:BAE33717.1 protein_id:CAI25240.1 protein_id:CAI25241.1 protein_id:CAI25242.1 protein_id:EDL40522.1 UniParc:UPI00000EB0DD
definition	note : transcript_id=ENSMUST00000109878 protein_id : ENSMUSP00000105504 translation : MHAWEAPGSLSRALPLASSVLMLLLSCLWLLGAGPSLRLAPELLMEPWQVHRLLTHALGHTALPGLLLSLLLLPTLGWWQECHLGTVRFLHNSTVLALATGLLAVLLAGLGVSGAAGGCGYMPVHLAMLAGQSHHPGWPQRTLPPWLLPWLLLALTLLLSSEPPFLQLLCGLLTGLAYAAGAFQWLELSEQRLQVLQEGVLCKSLARCWPLRLFPTPGSLGELPVTYPAGVRPATPRPPYLASSDSWPHSDGSAQLPPRLGPGQLTWKNSERGLDWAGSSFASATTMWAALDEQMLQEGIQASLLDVSVQGSQSSLWLPKPSVSSLRLQQLQHMGFPTEQAAVALAATGRVEGAVSLLVEGLVDTEALVTEGRSSPAHCTGTGAS

name	Rhbdd3 (ENSMUSG00000034175) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000011356 Vega_transcript:Rhbdd3-004 Uniprot/SPTREMBL:Z4YMS1 UCSC:uc007hwe.2 EMBL:AL645845 GO:GO:0000165 GO:GO:0001889 GO:GO:0002673 GO:GO:0004252 GO:GO:0005515 GO:GO:0005622 GO:GO:0006508 GO:GO:0009410 GO:GO:0016021 GO:GO:0032815 GO:GO:0045732 GO:GO:0050708 MGI_trans_name:Rhbdd3-004 Vega_translation:209005 Vega_translation:OTTMUSP00000005293 goslim_goa:GO:0003674 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0006464 goslim_goa:GO:0007165 goslim_goa:GO:0008150 goslim_goa:GO:0008233 goslim_goa:GO:0048856 OTTP:OTTMUSP00000005293 OTTT:OTTMUST00000011356 UniParc:UPI0000470519
definition	note : transcript_id=ENSMUST00000148761 protein_id : ENSMUSP00000120264 translation : MHAWEAPGSLSRALPLASSVLMLLLSCLWLLGAGPSLRLAPELLMEPWQVHRLLTHALGHTALPGLLLSLLLLPTLGWWQECHLGTVRFLHNSTVLALATGLLAVLLAGLGVSGAAGGCGYMPVHLAMLAGQSHHPGWPQRTLPPWLLPWLLLALTLLLSSEPPFLQLLCGLLTGLAYAAGAFQWLELSEQR

name	Emid1 (ENSMUSG00000034164) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	CCDS:CCDS24398.1 Uniprot/SWISSPROT:Q91VF5 RefSeq_peptide:NP_542162 RefSeq_mRNA:NM_080595.2 RefSeq_peptide_predicted:XP_006514579.1 RefSeq_peptide_predicted:XP_006514580.1 Vega_transcript:Emid1-001 Vega_transcript:OTTMUST00000011362 Uniprot/SPTREMBL:Q5SUT2 UCSC:uc007hwg.1 EMBL:AJ416093 EMBL:BC130023 EMBL:CH466574 GO:GO:0005515 GO:GO:0005578 GO:GO:0005581 GO:GO:0005783 GO:GO:0005794 GO:GO:0008150 MGI_trans_name:Emid1-001 Vega_translation:209008 Vega_translation:OTTMUSP00000005297 goslim_goa:GO:0003674 goslim_goa:GO:0005575 goslim_goa:GO:0005576 goslim_goa:GO:0005578 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005737 goslim_goa:GO:0005783 goslim_goa:GO:0005794 goslim_goa:GO:0008150 goslim_goa:GO:0043226 goslim_goa:GO:0043234 protein_id:AAI30024.1 protein_id:CAC94780.1 protein_id:EDL40525.1 OTTP:OTTMUSP00000005297 OTTT:OTTMUST00000011362 UniParc:UPI000002918A
definition	note : transcript_id=ENSMUST00000062821 protein_id : ENSMUSP00000061704 translation : MGGPRAWTLLCLGLLLPGGGAAWSVPGARFSGRRNWCSYVVTRTVSCHVQNGTYLQRVLQNCPWPMGCPGNSYRTVVRPLYKVTYKTVTAREWRCCPGHSGVTCEEGSPGLLEPTWTDSGMRRMAVRPTALSGCLNCSKVSELTERLKALEAKVAVLSVTEQTVPSVPATPEDSALLWGSPAARGSPGDGSLQDRLDSWGLPGPTGPKGGTDSQSPVRIRGPPGPQGPPGRPGQTGAAGTPGKMGPPGPPGPPGPPGPPAPVGPPYGQVSLHGDPLLSNTFTEMGSHWPQGPTGPPGPPGPPGPMGPPGLPGPMGAPGSPGHMGIPGPSGPKGTSGHPGEKGERGLPGEPGPQGLMGVPGEPGPKGDPGEKSHWGEGLHQLREALKILAERVLILETMIGLYEPDLGSGAGPDGTGTPSLLRGKRGGHPTNYPIITPRRRSERS

name	Emid1 (ENSMUSG00000034164) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:Emid1-002 Vega_transcript:OTTMUST00000011363 Uniprot/SPTREMBL:F6YMU2 UCSC:uc007hwf.1 GO:GO:0005515 GO:GO:0005578 GO:GO:0005783 GO:GO:0005794 GO:GO:0008150 MGI_trans_name:Emid1-002 Vega_translation:209009 Vega_translation:OTTMUSP00000005298 goslim_goa:GO:0003674 goslim_goa:GO:0005575 goslim_goa:GO:0005576 goslim_goa:GO:0005578 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005737 goslim_goa:GO:0005783 goslim_goa:GO:0005794 goslim_goa:GO:0008150 goslim_goa:GO:0043226 OTTP:OTTMUSP00000005298 OTTT:OTTMUST00000011363 UniParc:UPI000059DC25
definition	codon_start : 3 note : transcript_id=ENSMUST00000132328 protein_id : ENSMUSP00000117779 translation : XPQGPPGRPGQTGAAGTPGKMGPPGPPGPPGPPGPPAPVGPPYGQVSLHGDPLLSNTFTEMGSHWPQGPTGPPGPPGPPGPMGPPGLPGPMGAPGSPGHMGIPGPSGPKGTSGHPGEKGERGLPGEPGPQGLMGVPGEPGPKGDPGEKSHWAPSLQSFLQQQAQLELLARRVTLLEAIIWPEPDLGSGAGPDGTGTPSLLRGKRGGHPTNYPIITPRRRSERS

name	Emid1 (ENSMUSG00000034164) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Uniprot/SWISSPROT:Q91VF5 UCSC:uc007hwg.1 EMBL:AJ416093 GO:GO:0005515 GO:GO:0005578 GO:GO:0005581 GO:GO:0005783 GO:GO:0005794 GO:GO:0008150 MGI_trans_name:Emid1-201 goslim_goa:GO:0003674 goslim_goa:GO:0005575 goslim_goa:GO:0005576 goslim_goa:GO:0005578 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005737 goslim_goa:GO:0005783 goslim_goa:GO:0005794 goslim_goa:GO:0008150 goslim_goa:GO:0043226 goslim_goa:GO:0043234 protein_id:CAC94780.1 UniParc:UPI00001D6A1B
definition	note : transcript_id=ENSMUST00000163299 protein_id : ENSMUSP00000131391 translation : MGGPRAWTLLCLGLLLPGGGAAWSVPGARFSGRRNWCSYVVTRTVSCHVQNGTYLQRVLQNCPWPMGCPGNRTVVRPLYKVTYKTVTAREWRCCPGHSGVTCEEGSPGLLEPTWTDSGMRRMAVRPTALSGCLNCSKVSELTERLKALEAKVAVLSVTEQTVPSVPATPEDSALLWGSPAARGSPGDGSLQDRLDSWGLPGPTGPKGGTDSQSPVRIRGPPGPQGPPGRPGQTGAAGTPGKMGPPGPPGPPGPPGPPAPVGPPYGQVSLHGDPLLSNTFTEMGSHWPQGPTGPPGPPGPPGPMGPPGLPGPMGAPGSPGHMGIPGPSGPKGTSGHPGEKGERGLPGEPGPQGLMGVPGEPGPKGDPGEKSHWGEGLHQLREALKILAERVLILETMIGLYEPDLGSGAGPDGTGTPSLLRGKRGGHPTNYPIITPRRRSERS

name	Emid1 (ENSMUSG00000034164) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:Emid1-005 Vega_transcript:OTTMUST00000011366 Uniprot/SPTREMBL:F6U7K9 UCSC:uc007hwf.1 GO:GO:0005515 GO:GO:0005578 GO:GO:0005783 GO:GO:0005794 GO:GO:0008150 MGI_trans_name:Emid1-005 Vega_translation:209012 Vega_translation:OTTMUSP00000047535 goslim_goa:GO:0003674 goslim_goa:GO:0005575 goslim_goa:GO:0005576 goslim_goa:GO:0005578 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005737 goslim_goa:GO:0005783 goslim_goa:GO:0005794 goslim_goa:GO:0008150 goslim_goa:GO:0043226 OTTP:OTTMUSP00000047535 OTTT:OTTMUST00000011366 UniParc:UPI0001DD3663
definition	codon_start : 3 note : transcript_id=ENSMUST00000151906 protein_id : ENSMUSP00000124014 translation : XPPGLPGPMGAPGSPGHMGIPGPSGPKGTSGHPGEKGERGLPGEPGPQGLMGVPGEPGPKGDPGEKSHWAPSLQSFLQQQAQLELLARRVTLLEAIIWPGYSQASWTKELLGFEGY

name
type	STS
link
xref	UniSTS_NUM:180146 UniSTS:AW122071 WI_MRC-RH:702148
definition	note : map_weight=1 standard_name : AW122071

name
type	misc_feature
link
xref
definition	note : contig AL645845.14 2001..109446(1)

name	Ewsr1 (ENSMUSG00000009079)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000011347 Vega_transcript:OTTMUST00000011347 MGI_trans_name:Ewsr1-008 OTTT:OTTMUST00000011347
definition	note : processed_transcript note : transcript_id=ENSMUST00000151847

name	Rhbdd3 (ENSMUSG00000034175)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000011360 Vega_transcript:OTTMUST00000011360 MGI_trans_name:Rhbdd3-008 OTTT:OTTMUST00000011360
definition	note : processed_transcript note : transcript_id=ENSMUST00000137370

name	Rhbdd3 (ENSMUSG00000034175)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000011359 Vega_transcript:OTTMUST00000011359 MGI_trans_name:Rhbdd3-007 OTTT:OTTMUST00000011359
definition	note : processed_transcript note : transcript_id=ENSMUST00000146879

name	Rhbdd3 (ENSMUSG00000034175)
type	misc_RNA
link	VEGA Ensembl MGI
xref	RefSeq_ncRNA:NR_110961 Vega_transcript:OTTMUST00000011361 Vega_transcript:OTTMUST00000011361 UCSC:uc011xrc.2 MGI_trans_name:Rhbdd3-009 OTTT:OTTMUST00000011361
definition	note : processed_transcript note : transcript_id=ENSMUST00000129016

name	Emid1 (ENSMUSG00000034164)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000011367 Vega_transcript:OTTMUST00000011367 MGI_trans_name:Emid1-006 OTTT:OTTMUST00000011367
definition	note : retained_intron note : transcript_id=ENSMUST00000132196

Polymorphisms Report

Target Strain	MSMv4 JF1v3 KJRv1 SWNv1 CHDv1 NJLv1 BLG2v1 HMIv1 BFMv1 PGN2v1

Gene Symbol (Gene ID)	Rhbdd3 (ENSMUSG00000034175)
Transcript ID	ENSMUST00000109878

Reports
substitution
cSNPs	8
Insertion	10
Deletion	6
SNPs	-1kb 5095365(c.-7837A>G), 5095553(c.-7649T>G), 5095771(c.-7431G>T), 5096551(c.-6651A>G), 5096615(c.-6587T>C), 5096929(c.-6273T>C), 5097042(c.-6160G>A), 5097186(c.-6016C>T), 5097504(c.-5698G>A), 5099399(c.-3803C>T), 5099473(c.-3729T>C), 5099578(c.-3624T>G), 5099840(c.-3362C>G), 5099952(c.-3250A>G), 5100005(c.-3197G>A), 5100132(c.-3070A>C), 5'UTR CDS 5103282(c.81T>C), 5104143(c.271C>T), 5104154(c.282T>C), 5104262(c.390T>G), 5104364(c.492C>T), 5105282(c.630G>A), 5105689(c.952T>C), 5105903(c.1084C>A), 3'UTR 5100198(c.-298T>C), 5100542(c.-124A>G), 5106007(c.30C>G), INTRON 5100268(c.-270+42T>C), 5100278(c.-270+52C>T), 5100310(c.-270+84G>A), 5100840(c.-79+253C>A), 5100990(c.-79+403A>T), 5101301(c.-78-568G>A), 5101306(c.-78-563C>T), 5102544(c.-41-617T>A), 5102672(c.-41-489C>A), 5102702(c.-41-459C>T), 5102774(c.-41-387G>A), 5102994(c.-41-167G>T), 5103065(c.-41-96G>T), 5103363(c.148+14C>G), 5103382(c.148+33T>C), 5103439(c.148+90G>A), 5103698(c.149-323A>G), 5103854(c.149-167G>A), 5103869(c.149-152C>T), 5103915(c.149-106G>A), 5104489(c.532+85G>A), 5104775(c.532+371G>T), 5104777(c.532+373G>A), 5104792(c.532+388G>T), 5104905(c.533-280T>C), 5105035(c.533-150C>T), 5105742(c.980+25A>G), +1kb 5106315(c.338C>T), 5106338(c.361C>T), 5106366(c.389G>T), 5106379(c.402C>T), 5106822(c.845G>A), 5107029(c.1052T>A), 5107088(c.1111C>T), 5107180(c.1203T>C), 5107327(c.1350T>C), 5107410(c.1433G>A), 5107441(c.1464A>T), 5107718(c.1741C>A), 5108020(c.2043A>T), 5108028(c.2051A>G), 5108050(c.2073A>G), 5108092(c.2115T>C), 5108098(c.2121C>T), 5108109(c.2132C>G), 5108146(c.2169T>C), 5108297(c.2320A>T), 5108355(c.2378A>C), 5108368(c.2391T>C), 5108402(c.2425T>C), 5108441(c.2464C>T), 5108454(c.2477C>T), 5108459(c.2482T>C), 5108506(c.2529C>T), 5108557(c.2580T>C), 5108687(c.2710C>T), 5108793(c.2816T>G), 5108808(c.2831G>A), 5108833(c.2856A>G), 5108854(c.2877A>G), 5108885(c.2908T>G), 5109013(c.3036G>T), 5109153(c.3176C>T), 5109394(c.3417C>T), 5109408(c.3431C>T), 5109525(c.3548C>T), 5109774(c.3797T>C), 5109879(c.3902T>C), 5109991(c.4014T>C), 5110000(c.4023A>T), 5110005(c.4028T>C), 5110011(c.4034T>C), 5110012(c.4035G>A), 5110030(c.4053G>A), 5110075(c.4098A>G), 5110151(c.4174C>G), 5110420(c.4443G>A), 5110459(c.4482G>A), 5110461(c.4484G>A), 5110523(c.4546T>C), 5110878(c.*4901A>G),
Insertions	-1kb 5095703 (c.-7499dupA), 5095818 (c.-7384_-7383insA), 5097083 (c.-6119_-6118insTAAAT), 5097296 (c.-5906_-5905insA), 5098415 (c.-4787_-4786insCGGGC), 5'UTR CDS 3'UTR INTRON 5100744 (c.-79+158dupA), 5102561 (c.-41-598dupG), +1kb 5106589 (c.612_613insTT), 5107969 (c.1992_1993insT), 5109699 (c.3722_3723insG),
Deletions	-1kb 5096896 (c.-6305_-6303delACC), 5099711 (c.-3490_-3485delGTGATC), 5'UTR CDS 3'UTR INTRON 5100396 (c.-269_-267delGAG), 5102945 (c.-41-215_-41-214delAT), +1kb 5106820 (c.844delG), 5107277 (c.1301delC),
coding sequence substitutions
premature termination by the nucleotide substitution	0
synonymous num	6
non-synonymous num	2
synonymous substitutions	5103282 (p.Cys27Cys), 5104154 (p.Thr94Thr), 5104262 (p.Ala130Ala), 5104364 (p.Pro164Pro), 5105282 (p.Pro210Pro), 5105689 (p.Leu318Leu),
non-synonymous substitutions	5104143 (p.His91Tyr), 5105903 (p.Leu362Ile),
B6 transcript (ENSMUST00000109878)	MHAWEAPGSLSRALPLASSVLMLLLSCLWLLGAGPSLRLAPELLMEPWQVHRLLTHALGH TALPGLLLSLLLLPTLGWWQECHLGTVRFLHNSTVLALATGLLAVLLAGLGVSGAAGGCG YMPVHLAMLAGQSHHPGWPQRTLPPWLLPWLLLALTLLLSSEPPFLQLLCGLLTGLAYAA GAFQWLELSEQRLQVLQEGVLCKSLARCWPLRLFPTPGSLGELPVTYPAGVRPATPRPPY LASSDSWPHSDGSAQLPPRLGPGQLTWKNSERGLDWAGSSFASATTMWAALDEQMLQEGI QASLLDVSVQGSQSSLWLPKPSVSSLRLQQLQHMGFPTEQAAVALAATGRVEGAVSLLVE GLVDTEALVTEGRSSPAHCTGTGAS*
MSMv4 transcript	MHAWEAPGSLSRALPLASSVLMLLLSCLWLLGAGPSLRLAPELLMEPWQVHRLLTHALGH TALPGLLLSLLLLPTLGWWQECHLGTVRFLYNSTVLALATGLLAVLLAGLGVSGAAGGCG YMPVHLAMLAGQSHHPGWPQRTLPPWLLPWLLLALTLLLSSEPPFLQLLCGLLTGLAYAA GAFQWLELSEQRLQVLQEGVLCKSLARCWPLRLFPTPGSLGELPVTYPAGVRPATPRPPY LASSDSWPHSDGSAQLPPRLGPGQLTWKNSERGLDWAGSSFASATTMWAALDEQMLQEGI QASLLDVSVQGSQSSLWLPKPSVSSLRLQQLQHMGFPTEQAAVALAATGRVEGAVSLLVE GIVDTEALVTEGRSSPAHCTGTGAS*
homology	99.48 (386 / 386)

Exon Detail Report

Gene Symbol (Gene ID)	Rhbdd3 (ENSMUSG00000034175)
Transcript ID	ENSMUST00000109878


..........GCGAACCGGAGCTCTTCGGCTCTTCGCTCCCGAAACCGTTGACCCGATCC
TCTCCCAAAGAGCCGGACGTGACGAGTGGTCTAAAAAAAAAAGGCGCCTCGGGGGCCAGC
GCGCCAGTGAGCGAGGGTTACCCACGAACCCGAGAGCTCCTTGGCGCGAGGCGCGGTGGC
TCGGAATGGTTACGCCCGCTGGCTCTAGGGACCGTCTCTGAAGAGTCTGCCCTGGAGGGA
GACGGAGGCTGGTGGGAGGGCTGGGGGAAGGGATCCCGGCCGGCCTGAAACAACTGCTGA
CTAATCGGCGGGCGGGATCACGCGCCCCTGTGTGCGTGCAGCGGGTTTCGGGCACCGAGG
GCTCGGCCTGGAACCGGCGGCCGGACTTACCGGGCGGGCCCCCCTGCTCGGTTTTCTAGG
GTGGGTGGGGGGGGGAGGACATGCTCCCCAGGCCCCTGGACGCGTGGCCTGAGCGGGCGG
GGGAGGGGACCGAGGGCCGTCGGCTTGGGAGGGAGGCCGGGAATGCCGCGCCCGACCCCA
GTAACGGTCGGGGTTGAGAAGCCCTGTGATCGTCCTTCAACCCATCCCCTTGTTTCAACA
GAAAACCCAGAACCCACGAAATTGAGTTCTTTCCTTAAAGTTACAAAGCTGAATGCGACC
CAGACCCCGGGCCTCCCCTCTCTGTACACCGCCGGGAAGCTTCGCCACACTGTCCTTGCC
TTCCCACTCTGTCCTCCTGGCTTCCCTGCAAGGTAGGCAGGGTGTGATATGCATAGCTCT
GAGGTCTCTGACAAGGGCTCCAGAAGGACACTGAGGCGGATTGTTGGCGATTGGTGGGGT
TTTTGGTTTTGCTTTTCTAAGAGTTACTGACACAGTGGACAGACACAGACAAACATTAGC
ATGGCGGGCGAGGACTCGGAAGAAACCAGGGTCCATGTGGGAGAAGTAGGCGTGTCGCAC
CCTTCTGAGGATGGGCGTGGCTTCACTGCCGGAGCTTCTGGCCCGGGGCA
GGCAGGGAAGGGAGCTGGGAGCCCGATGTGTAGCCCCCCAGCTCCCCATTTTATGTAAAATCACCTTCAG
GTGAGAGATCCAGGCGTCCGAGTCT..........TTATTAATTGAAGATATGGTTGCAG
GAGTGTTACGGCTTGCCTATGATGTATGAGGCCCTAGTTTCCATTCCTATCGCCAAGAAAGAGAAGAGACTGGTCCAGAGGACTCGAGGCCCAGTTCCCTATGTCCATGGACCTGTCCCCTAGTGCCCAGGGATGGAATGGTTGTGAGAAGGTGCAAGAGGAAGCTTCATTTTAGGTGACCCTGCCTCCAG
GTAAGGGTGAAATCTGCCTGCTTTT..........ACTTTTTCTTTTATTCTTTGTCCAG
CACTGGGAAGCAAATCCAGGTGCCTGTGCATGGCTAG
GTGAGTACGCTCCCACTGTCTGCAT..........TGCTACTGTTTTTGTTTATCCCTAG
CCTACAGCCTCAGGACCACCTTTGACTACCATCAACCAAATATGCATGCCTGGGAGGCCCCTGGCTCACTGTCCCGGGCCCTGCCCCTTGCTTCCTCAGTCCTGATGCTGCTGCTGAGCTGCCTGTGGTTATTGGGGGCTGGCCCCAGCCTCAGATTGGCTCCAGAGCTGCTAATGGAACCCTGGCAGG
GTAAGGACTGGCTGCATGGACCTTG..........TCTGACCTGACCTTCTTGTTCCCAG
TGCACAGGCTGCTGACCCATGCTCTGGGCCACACTGCACTGCCAGGCCTGCTCCTGAGCCTGCTGCTTCTGCCCACTCTGGGCTGGTGGCAGGAGTGCCATCTGGGCACTGTGCGCTTCCTGTACAACTCCACCGTGCTTGCCCTGGCTACTGGGCTGCTGGCTGTGCTGCTGGCGGGCCTTGGGGTGTCCGGTGCGGCTGGAGGCTGTGGCTATATGCCTGTCCATCTAGCTATGCTGGCGGGACAGAGTCACCACCCTGGATGGCCTCAGAGGACACTGCCACCATGGCTGCTACCATGGCTGCTGCTGGCCCTGACCCTGCTGCTCAGCTCTGAGCCACCTTTCCTGCAGCTCCTTTGTGGCCTTCTCACTGGCCTAGCCT
GTATCCTTTGCCTGAGCCCAGAGCC..........CAGCCGCCCTGCCCTGGGCAGGTAG
ATGCTGCTGGGGCCTTCCAGTGGCTGGAGCTCTCAGAGCAGAGACTGCAGGTGTTACAGGAAGGTGTCCTTTGCAAGTCTCTGGCCCGATGCTGGCCACTGAGGCTCTTTCCCACCCCGGGCAGTCTGGGTGAGCTGCCTGTCACTTATCCTGCTGGAGTGAG
GTGAGGGTGGTGTTGGGCTCAGTGT..........AGGCCATCCACCTCTGTCCCTACAG
GCCTGCCACCCCTAGACCTCCTTACCTGGCTTCCTCAGACTCCTGGCCTCACAGTGATGGCTCTGCTCAGCTCCCACCACGCCTGGGGCCTGGACAGCTGACATGGAAGAACTCGGAGAGGGGCTTGGACTGGGCTGGGTCTAGCTTTGCTTCAGCAACGACGATGTGGGCAGCCCTAGACGAGCAGATGCTACAGGAAGGGATCCAGGCCTCCCTTCTTGATGTGTCAGTTCAGGGTTCCCAGAGCTCTCTGTGGCTGCCAAAGCCCTCTGTGTCTTCTCTAAG
GTAAGGCAGGGTGGGCAGGGGTGCG..........ATTTCTTCCTTGTCCTACCTCACAG
GCTGCAGCAGCTACAGCACATGGGATTCCCCACTGAGCAGGCTGCAGTGGCCTTGGCAGCTACAGGGCGTGTAGAGGGGGCAGTGTCACTGCTGGTGGAAGGGATAGTGGACACTGAGGCCCTAGTGACTGAGGGAAGGAGTAGCCCTGCCCACTGCACAGGCACTGGGGCCTCATAGTCCTTTCCTTGTCTGCTGAGGGCTTGGTGGGGTCTTGACTGCATCCCTGGGGTAGGACTAGGCCCCAACATGTTTCCCTGGTACTTTGTAAGAATAAAAGCTGATTTGTTTTTC
AACCTGGTCTCCTGAGTGTCAGTTGTCATGTCTGGCTCCTCTGTGTTGGCATCATGGAGG
AAGGAGTGAGCAACAGTGAATGTGTGGCTGTTGAAGGAGGATCCTGCCCCCATATCCTTG
GCTTGGGTGGCCCTTTCTGGCTGCCCTGGGCAGCACATAGAGACCAAGCGAAGTAGGGTC
AAGCAGGGATGTTTATTGTCCTGTACATATTGACTCGTGGCATTTGCAGCAGACACTTGG
AGTAGGTGTCCCTTGTACACATCCCATTCCCACATAGGACATGGGAGTAGGGGCCTGGGG
TAGAGCTGATATAAGAAGCACCGACCGTTCAGTTAGATTAAGCAGCCTGGACTCAGGTGG
GAACTCAGCACCAGAAAACAAGGGGCACACAGGACTCCCCAAGGTTTTACAGGAGGGGAA
CTGAGACTTCCGCCCCAATCCTTGCATATCTGCAGGGCCAGGCGGTCCCAGGTCCTAACT
TTAGGCAGCTGACGTGACTTGTACCTCCGTCCACCCCCCATTCAAAGCCTTTTCACCCCA
TTTCACAGAGGGAACCAACCAGGCCGGGTGCAAGTGAGGCCTGACTTTTTGAGGCCCAGT
CCCTGTTTAGTCTGTCATGTTATAGGCTGCCATCACTGAGATCTGCCTACCCCTAAGACC
AAGGGATCCCTGAGGGTATTAATAAATAGGACCTGGCAGTCCCGGAGGCAGCGGGTCAGG
TCCAGGCTAGGGGAGGAAGCCTGCAGCCTCTCAGCTCCTCTCGCTGCGTCTCCTGGGGGT
GATGATCGGGTAGTTGGTTGGGTGTCCTCCCCTCTTGCCTCGAAGGAGGCTGGGGGTACC
TGTGCCATCAGGGCCTGCCCCGGATCCCAAGTCTGGTTCTGCCGGAGGGAATAAGGAGAG
AGGCTATGTCAGGGGGACACTCACATGGGGAACCCACACTTTGCCCTGGGAGGTAGCTGG
GTATCCTGGCATCCTAGAGATGGAACTGTAGGAAATTTGG..........

Sequence Detail Report

Gene Symbol (Gene ID)	Rhbdd3 (ENSMUSG00000034175)
Transcript ID	ENSMUST00000109878

		SNP Information
Strain :
Sequence Retrieve :
Exon translate : CDS Start ( 1 ) - End ( 386 ) -
Strand :	forward reverse
Show sequence :	nucleotide amino acid
Color information

No.	Exon / Intron	Start	End	Start Phase	End Phase	Length	Sequence
	5' upstream sequence						..........GCGAACCGGAGCTCTTCGGCTCTTCGCTCCCGAAACCGTTGACCCGATCC TCTCCCAAAGAGCCGGACGTGACGAGTGGTCTAAAAAAAAAAGGCGCCTCGGGGGCCAGC GCGCCAGTGAGCGAGGGTTACCCACGAACCCGAGAGCTCCTTGGCGCGAGGCGCGGTGGC TCGGAATGGTTACGCCCGCTGGCTCTAGGGACCGTCTCTGAAGAGTCTGCCCTGGAGGGA GACGGAGGCTGGTGGGAGGGCTGGGGGAAGGGATCCCGGCCGGCCTGAAACAACTGCTGA CTAATCGGCGGGCGGGATCACGCGCCCCTGTGTGCGTGCAGCGGGTTTCGGGCACCGAGG GCTCGGCCTGGAACCGGCGGCCGGACTTACCGGGCGGGCCCCCCTGCTCGGTTTTCTAGG GTGGGTGGGGGGGGGAGGACATGCTCCCCAGGCCCCTGGACGCGTGGCCTGAGCGGGCGG GGGAGGGGACCGAGGGCCGTCGGCTTGGGAGGGAGGCCGGGAATGCCGCGCCCGACCCCA GTAACGGTCGGGGTTGAGAAGCCCTGTGATCGTCCTTCAACCCATCCCCTTGTTTCAACA GAAAACCCAGAACCCACGAAATTGAGTTCTTTCCTTAAAGTTACAAAGCTGAATGCGACC CAGACCCCGGGCCTCCCCTCTCTGTACACCGCCGGGAAGCTTCGCCACACTGTCCTTGCC TTCCCACTCTGTCCTCCTGGCTTCCCTGCAAGGTAGGCAGGGTGTGATATGCATAGCTCT GAGGTCTCTGACAAGGGCTCCAGAAGGACACTGAGGCGGATTGTTGGCGATTGGTGGGGT TTTTGGTTTTGCTTTTCTAAGAGTTACTGACACAGTGGACAGACACAGACAAACATTAGC ATGGCGGGCGAGGACTCGGAAGAAACCAGGGTCCATGTGGGAGAAGTAGGCGTGTCGCAC CCTTCTGAGGATGGGCGTGGCTTCACTGCCGGAGCTTCTGGCCCGGGGCA
1	EXON 1	5100157	5100226	-	-	70	GGCAGGGAAGGGAGCTGGGAGCCCGATGTGTAGCCCCCCAGCTCCCCATTTTATGTAAAA TCACCTTCAG
	INTRON 1 - 2	5100227	5100396			170	GTGAGAGATCCAGGCGTCCGAGTCT..........TTATTAATTGAAGATATGGTTGCAG
2	EXON 2	5100397	5100587	-	-	191	GAGTGTTACGGCTTGCCTATGATGTATGAGGCCCTAGTTTCCATTCCTATCGCCAAGAAA GAGAAGAGACTGGTCCAGAGGACTCGAGGCCCAGTTCCCTATGTCCATGGACCTGTCCCC TAGTGCCCAGGGATGGAATGGTTGTGAGAAGGTGCAAGAGGAAGCTTCATTTTAGGTGAC CCTGCCTCCAG
	INTRON 2 - 3	5100588	5101868			1281	GTAAGGGTGAAATCTGCCTGCTTTT..........ACTTTTTCTTTTATTCTTTGTCCAG
3	EXON 3	5101869	5101905	-	-	37	CACTGGGAAGCAAATCCAGGTGCCTGTGCATGGCTAG
	INTRON 3 - 4	5101906	5103160			1255	GTGAGTACGCTCCCACTGTCTGCAT..........TGCTACTGTTTTTGTTTATCCCTAG
4	EXON 4	5103161	5103349	-	1	189	CCTACAGCCTCAGGACCACCTTTGACTACCATCAACCAAATATGCATGCCTGGGAGGCCC CTGGCTCACTGTCCCGGGCCCTGCCCCTTGCTTCCTCAGTCCTGATGCTGCTGCTGAGCT GCCTGTGGTTATTGGGGGCTGGCCCCAGCCTCAGATTGGCTCCAGAGCTGCTAATGGAAC CCTGGCAGG
	INTRON 4 - 5	5103350	5104020			671	GTAAGGACTGGCTGCATGGACCTTG..........TCTGACCTGACCTTCTTGTTCCCAG
5	EXON 5	5104021	5104404	1	1	384	TGCACAGGCTGCTGACCCATGCTCTGGGCCACACTGCACTGCCAGGCCTGCTCCTGAGCC TGCTGCTTCTGCCCACTCTGGGCTGGTGGCAGGAGTGCCATCTGGGCACTGTGCGCTTCC TGTACAACTCCACCGTGCTTGCCCTGGCTACTGGGCTGCTGGCTGTGCTGCTGGCGGGCC TTGGGGTGTCCGGTGCGGCTGGAGGCTGTGGCTATATGCCTGTCCATCTAGCTATGCTGG CGGGACAGAGTCACCACCCTGGATGGCCTCAGAGGACACTGCCACCATGGCTGCTACCAT GGCTGCTGCTGGCCCTGACCCTGCTGCTCAGCTCTGAGCCACCTTTCCTGCAGCTCCTTT GTGGCCTTCTCACTGGCCTAGCCT
	INTRON 5 - 6	5104405	5105184			780	GTATCCTTTGCCTGAGCCCAGAGCC..........CAGCCGCCCTGCCCTGGGCAGGTAG
6	EXON 6	5105185	5105347	1	2	163	ATGCTGCTGGGGCCTTCCAGTGGCTGGAGCTCTCAGAGCAGAGACTGCAGGTGTTACAGG AAGGTGTCCTTTGCAAGTCTCTGGCCCGATGCTGGCCACTGAGGCTCTTTCCCACCCCGG GCAGTCTGGGTGAGCTGCCTGTCACTTATCCTGCTGGAGTGAG
	INTRON 6 - 7	5105348	5105432			85	GTGAGGGTGGTGTTGGGCTCAGTGT..........AGGCCATCCACCTCTGTCCCTACAG
7	EXON 7	5105433	5105717	2	2	285	GCCTGCCACCCCTAGACCTCCTTACCTGGCTTCCTCAGACTCCTGGCCTCACAGTGATGG CTCTGCTCAGCTCCCACCACGCCTGGGGCCTGGACAGCTGACATGGAAGAACTCGGAGAG GGGCTTGGACTGGGCTGGGTCTAGCTTTGCTTCAGCAACGACGATGTGGGCAGCCCTAGA CGAGCAGATGCTACAGGAAGGGATCCAGGCCTCCCTTCTTGATGTGTCAGTTCAGGGTTC CCAGAGCTCTCTGTGGCTGCCAAAGCCCTCTGTGTCTTCTCTAAG
	INTRON 7 - 8	5105718	5105799			82	GTAAGGCAGGGTGGGCAGGGGTGCG..........ATTTCTTCCTTGTCCTACCTCACAG
8	EXON 8	5105800	5106091	2	-	292	GCTGCAGCAGCTACAGCACATGGGATTCCCCACTGAGCAGGCTGCAGTGGCCTTGGCAGC TACAGGGCGTGTAGAGGGGGCAGTGTCACTGCTGGTGGAAGGGATAGTGGACACTGAGGC CCTAGTGACTGAGGGAAGGAGTAGCCCTGCCCACTGCACAGGCACTGGGGCCTCATAGTC CTTTCCTTGTCTGCTGAGGGCTTGGTGGGGTCTTGACTGCATCCCTGGGGTAGGACTAGG CCCCAACATGTTTCCCTGGTACTTTGTAAGAATAAAAGCTGATTTGTTTTTC
	3' upstream sequence						AACCTGGTCTCCTGAGTGTCAGTTGTCATGTCTGGCTCCTCTGTGTTGGCATCATGGAGG AAGGAGTGAGCAACAGTGAATGTGTGGCTGTTGAAGGAGGATCCTGCCCCCATATCCTTG GCTTGGGTGGCCCTTTCTGGCTGCCCTGGGCAGCACATAGAGACCAAGCGAAGTAGGGTC AAGCAGGGATGTTTATTGTCCTGTACATATTGACTCGTGGCATTTGCAGCAGACACTTGG AGTAGGTGTCCCTTGTACACATCCCATTCCCACATAGGACATGGGAGTAGGGGCCTGGGG TAGAGCTGATATAAGAAGCACCGACCGTTCAGTTAGATTAAGCAGCCTGGACTCAGGTGG GAACTCAGCACCAGAAAACAAGGGGCACACAGGACTCCCCAAGGTTTTACAGGAGGGGAA CTGAGACTTCCGCCCCAATCCTTGCATATCTGCAGGGCCAGGCGGTCCCAGGTCCTAACT TTAGGCAGCTGACGTGACTTGTACCTCCGTCCACCCCCCATTCAAAGCCTTTTCACCCCA TTTCACAGAGGGAACCAACCAGGCCGGGTGCAAGTGAGGCCTGACTTTTTGAGGCCCAGT CCCTGTTTAGTCTGTCATGTTATAGGCTGCCATCACTGAGATCTGCCTACCCCTAAGACC AAGGGATCCCTGAGGGTATTAATAAATAGGACCTGGCAGTCCCGGAGGCAGCGGGTCAGG TCCAGGCTAGGGGAGGAAGCCTGCAGCCTCTCAGCTCCTCTCGCTGCGTCTCCTGGGGGT GATGATCGGGTAGTTGGTTGGGTGTCCTCCCCTCTTGCCTCGAAGGAGGCTGGGGGTACC TGTGCCATCAGGGCCTGCCCCGGATCCCAAGTCTGGTTCTGCCGGAGGGAATAAGGAGAG AGGCTATGTCAGGGGGACACTCACATGGGGAACCCACACTTTGCCCTGGGAGGTAGCTGG GTATCCTGGCATCCTAGAGATGGAACTGTAGGAAATTTGG..........