MoG+ -Mouse Genome database with high added value-

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BAC clone ordering.

Target CDS Information

Gene Symbol (Gene ID)

Wnk2 (ENSMUSG00000037989)

Cross Reference

GO	GO:0003674, GO:0005737, GO:0006468, ...show all
goslim_goa	GO:0003674, GO:0005575, GO:0005622, ...show all
MGI_trans_name	Wnk2-006
OTTP	OTTMUSP00000048646
OTTT	OTTMUST00000089109
UniParc	UPI0001DD36F7
Uniprot/SPTREMBL	F7BQG5
Vega_transcript	OTTMUST00000089109, Wnk2-006
Vega_translation	214435, OTTMUSP00000048646

Definition

codon_start:2
protein_id:ENSMUSP00000125522
translation:

XSTRARSRQERASRPRLTILNVCNTGDKMVECQLETHNHKMVTFKFDLDGDAPDEIATYM
VEHDFILPAERETFIEQMKDVMDKAEDMLSEDTDADHGSDTGTSPPHLGEQTVPSQCPCL
PAECLTHGKEVVYHLSSG

Chromosome

13

Length
Position(start - end)

3693
49067321 - 49071015

Orient to Chromosome

minus

Link

Location : (13:49067321-49071015)
/

Detail Map

Report

Polymorphisms
Exon
Sequence

Polymorphisms Report

Gene Symbol (Gene ID)	Wnk2 (ENSMUSG00000037989)
Transcript ID	ENSMUST00000159633

Reports
substitution
cSNPs	4
Insertion	7
Deletion	6
SNPs	+1kb 49071451(c.-437A>G), 49073272(c.-2258G>A), 49073322(c.-2308C>T), 49073427(c.-2413A>C), 49073437(c.-2423A>G), 49073654(c.-2640G>T), 49073709(c.-2695T>A), 49073871(c.-2857T>C), 49074797(c.-3783G>A), 49074892(c.-3878T>C), 49075664(c.-4650G>A), 49075752(c.-4738A>G), 5'UTR CDS 49067362(c.373A>G), 49067956(c.329A>G), 49068145(c.276A>G), 49070958(c.57A>G), 3'UTR INTRON 49061596(c.75-75C>T), 49061608(c.75-87C>G), 49061789(c.75-268A>G), 49061791(c.75-270G>A), 49061792(c.75-271T>C), 49061802(c.75-281G>A), 49061817(c.75-296C>T), 49061819(c.75-298A>G), 49061821(c.75-300T>C), 49061873(c.75-352G>A), 49061921(c.75-400C>T), 49061952(c.75-431A>G), 49062107(c.75-586C>T), 49062296(c.75-775C>T), 49062570(c.75-1049A>T), 49062585(c.75-1064A>G), 49062593(c.75-1072T>C), 49062622(c.75-1101T>G), 49062658(c.75-1137C>G), 49062922(c.75-1401C>T), 49062945(c.75-1424C>A), 49063029(c.75-1508C>T), 49063251(c.75-1730T>C), 49063318(c.75-1797A>G), 49063358(c.75-1837C>T), 49063392(c.75-1871T>C), 49063453(c.75-1932A>G), 49063455(c.75-1934C>T), 49063558(c.75-2037C>T), 49063624(c.75-2103A>C), 49063722(c.75-2201G>A), 49063918(c.75-2397A>C), 49063951(c.75-2430G>A), 49064246(c.75-2725G>C), 49064277(c.75-2756T>A), 49064363(c.75-2842A>C), 49064392(c.74+2855T>C), 49064693(c.74+2554G>A), 49064696(c.74+2551G>A), 49064860(c.74+2387A>C), 49064884(c.74+2363G>A), 49064941(c.74+2306C>T), 49065591(c.74+1656C>T), 49065671(c.74+1576T>C), 49065685(c.74+1562A>G), 49065771(c.74+1476A>G), 49065825(c.74+1422G>A), 49065952(c.74+1295A>C), 49065995(c.74+1252G>A), 49065996(c.74+1251A>G), 49066022(c.74+1225A>G), 49066150(c.74+1097T>C), 49066156(c.74+1091A>G), 49066365(c.74+882G>A), 49066383(c.74+864G>A), 49066442(c.74+805T>A), 49066543(c.74+704G>A), 49066620(c.74+627A>T), 49066636(c.74+611T>A), 49066653(c.74+594A>G), 49066693(c.74+554T>C), 49066708(c.74+539G>A), 49066796(c.74+451A>G), 49066799(c.74+448A>G), 49066862(c.74+385A>G), 49066971(c.74+276T>C), 49067075(c.74+172T>G), 49067397(c.369-31T>A), 49067404(c.369-38G>A), 49067423(c.369-57C>G), 49067533(c.369-167A>G), 49067627(c.369-261T>A), 49067664(c.368+253T>C), 49067783(c.368+134A>C), 49067784(c.368+133T>C), 49067969(c.323-7C>T), 49068423(c.178-180A>G), 49068937(c.178-694G>T), 49069230(c.178-987G>T), 49069385(c.178-1142C>T), 49070292(c.177+478G>A), 49070394(c.177+376T>C), -1kb 49056885(c.10436A>G), 49057245(c.10076G>A), 49057425(c.9896A>G), 49057436(c.9885G>A), 49057491(c.9830T>C), 49057547(c.9774C>T), 49057584(c.9737T>G), 49057681(c.9640T>C), 49057804(c.9517C>T), 49058313(c.9008G>A), 49058428(c.8893A>C), 49058560(c.8761T>C), 49058579(c.8742C>T), 49058762(c.8559T>C), 49058831(c.8490C>T), 49059135(c.8186A>G), 49059149(c.8172A>G), 49059346(c.7975G>A), 49059391(c.7930G>A), 49059424(c.7897A>G), 49059501(c.7820A>G), 49059649(c.7672G>A), 49059659(c.7662T>C), 49059683(c.7638T>G), 49059717(c.7604A>G), 49059759(c.7562G>C), 49059778(c.7543G>A), 49059841(c.7480C>T), 49059860(c.7461C>G), 49059938(c.7383T>G), 49059941(c.7380A>G), 49060300(c.7021A>G), 49060328(c.6993G>A), 49060680(c.6641C>T), 49060917(c.6404G>A), 49061242(c.*6079G>A),
Insertions	+1kb 49071838 (c.-825dupC), 49075108 (c.-4096_-4095dupCT), 5'UTR CDS 3'UTR INTRON 49064101 (c.75-2581dupA), 49065456 (c.74+1789_74+1790dupAA), 49065954 (c.74+1292_74+1293insAAG), 49069730 (c.177+1037_177+1039dupGAA), -1kb 49059550 (c.7770dupA),
Deletions	+1kb 5'UTR CDS 3'UTR INTRON 49063170 (c.75-1655_75-1650delGGGGGT), 49063554 (c.75-2034delA), 49066708 (c.74+537_74+538delTT), -1kb 49057968 (c.9352delA), 49059283 (c.8036_8037delGT), 49059959 (c.*7361delG),
coding sequence substitutions
premature termination by the nucleotide substitution	0
synonymous num	2
non-synonymous num	2
synonymous substitutions	49068145 (p.Thr92Thr), 49070958 (p.Leu19Leu),
non-synonymous substitutions	49067362 (p.Thr125Ala), 49067956 (p.Gln110Arg),
B6 transcript (ENSMUST00000159633)	STRARSRQERASRPRLTILNVCNTGDKMVECQLETHNHKMVTFKFDLDGDAPDEIATYMV EHDFILPAERETFIEQMKDVMDKAEDMLSEDTDADHGSDTGTSPPHLGEQTVPSQCPCLP AECLTHGKEVVYHLSSG*
MSMv4 transcript	STRARSRQERASRPRLTILNVCNTGDKMVECQLETHNHKMVTFKFDLDGDAPDEIATYMV EHDFILPAERETFIEQMKDVMDKAEDMLSEDTDADHGSDTGTSPPHLGERTVPSQCPCLP AECLAHGKEVVYHLSSG*
homology	98.55 (138 / 138)

Exon Detail Report

Gene Symbol (Gene ID)	Wnk2 (ENSMUSG00000037989)
Transcript ID	ENSMUST00000159633


..........CTGGCCCCCCACAGAGCTCCGAGAGGTACCGCTCTGCCTTGCCCTCAGGA
TGGGTGGGGGGTGCAGGCTCAGGAGCCAGCTTGGCCCAGCCTAGTACTGTTTGGCACGCT
CATTCAGATCCTGCCCTAGTTTGCCAGGACACTATAGGATTTTTAACAGATATCACGCCC
CCCCCCCTTTTCCAAATCTGACCCAGAGTAGCTCAGGGACTGTCTTTCTGGTCGTTGTCA
ATCCAGGATGAATCCTGGTTGCTGTCAGCCTCTGCCTGCTAGGCTATGGGTCCTGGTACT
AGATCTTGTCAGTCCAGGTTAAGGTCTGGTTGTTGTTGGTCCCTGCTGAGCTGTGGGTCC
TGGCATTAGTCCTTGTGGTGAGGACATTCCACAAAGGGAAGATAATGGGCAGAGCCTCAG
TACTCTATGGTATGCCTAGGCCCAGATGTTCAGGTCTCTCCTCCTGTGATCCGGGGTGGC
AGTGCTGGTCTTATTGGAGTGGGTATGAGAGGTAACTGGGATCCCACCATCCCAGAAAAC
TGGATGTTGTGCATGCAGGACTCCATGCTCATGTGAGACTCTACAGTCCTCACGACAGCC
TAGAGTGTCTGAGGTCTTGTTTGCACCCATGGGCAAAGTGAAGCATGTAGACCCGTTTCA
CAGGCAAAAGGCCTACAGGACCATCCAGCCCATCACAGGGAAGCTAGTGCTTCCCCTGGC
CCCTGGGTGATATTGAATGGGTACTGGAGGAAGAGAGGTCTTGGTTCCCCTTGAAGGCTG
GGTACCATCATCTATCTCTACAGGTCACAACTTTAGGCACTTAAAGCTCCAAGGCTGGAC
TGACTAGAGTGGGTTTTCTGGCAATCCACATAATGCTGTTAACATTCTTGGTTTTCCCTC
AGCTTTGGAGGTTCTGATGTCACCTCTGGAAGAGATCTGAGTGACAGCTGTGAAGGCACC
TTTGGAGGGGGCAGGCTGGAGGGAAGGACCGCCCGGAAACACCACCGTAG
GTCCACTCGTGCACGCTCGCGGCAGGAGAGGGCCAGCCGGCCCCGGCTCACTATCCTGAAT
GTGAGTGGCTGCTGTTTGGGGGCAC..........GCAATCTGATCATGGCTTCCCGCAG
GTGTGTAACACGGGGGACAAGATGGTGGAGTGTCAGCTGGAAACGCATAACCATAAGATGGTGACCTTCAAGTTTGACCTCGATGGGGACGCTCCGGATGAGATTGCCACGTACATG
GTAAGGCTGGGCCAGGGCTGAGGCC..........CCTGCAGTCCCATGTCTCTTTGTAG
GTAGAGCATGACTTTATCCTGCCCGCTGAGCGAGAGACCTTCATCGAGCAGATGAAGGATGTCATGGACAAGGCAGAAGACATGCTCAGTGAGGACACGGATGCTGACCATGGCTCTGATACAGGGACCAGCCCTCCACACCTGG
GTACCTGTGGTCTGGCCACGGGGGA..........CCCACAATCCCTTTCCCTTATGCAG
GAGAACGGACAGTCCCAAGCCAATGCCCCTGTCTACCAGCAGAATG
GTAAGTCTGTCTCGGAAAGGTAAGG..........CACCTCTCTGTGCTCTCTTTCTCAG
TCTTGCACACGGGAAAGAGGTGGTTTATCATCTGTCCAGTGGCTGAACACCCAGCAACAGACACTTCTGAATCATCACCCCCACTTCCTCTAAGCTCCTTGCAGCCAGAAGCCAGCCAAG
GTAGGAATGCACAGAGCCCAGACCC..........TGATGTCAATCCCTTTTTCTTCTAG
ACCCAGCGCCCTATCCAGACCAGCTGTCCTTGACGGACAAACCTAGTTTCCCAGCTGCTCAGCAGCTCCTGAGCCAGGCAGGCTCCAGCAACCCTCCTGGTGGAGCATCAGCCCCCTTGGCCCCGTCTTCCCCTCCTGTGACTACTGTAATCCCGGCAGCACCAGCCACCAGCACCGTGCCAGAGTCAGCAGC
AGGGACTGCCATGCAGGCAGGAGGTCCAGGGACTCATCAAGGACCAGCCAGTGTCCATGA
GACCCTCCAGCCACTGGCCGAGACACACTCTGCCCAGTGTACTGCCCAGCCCCTTAGTAC
TGGCCAAGGACCTTGCACCCCAGCTCTGGAAGCCTCTCGCTGCTCCACAGGTCTGGGGGA
GCCCATCTCAACCAGGGAGGTCAGCACTCAAGGAGAGCCCCTGCCTGCTTCAGTGCCAGA
ACCTAGCCCTCCCACTGGGGCCACACAATCTGTACCGGGTCAGCCACCACCCCCACTGCC
CATCACAGTAGGGGCTATCAGTCTGGCAGCTCCCCAGCTCCCCAGTCCCCCCCTGGGACC
TACTGCTCCCCCACCACCCCCCTCAGCCTTGGAATCTGATGGGGAAGGGCCACCCCCTAG
GGTGGGCTTCGTGGACAACACCATCAAGAGTCTGGATGAGAAACTGCGGACTCTGCTCTA
CCAGGAGCACGTGCCCACCTCCTCAGCCTCAGCTGGGACCCCCATGGAGGCAAGCGATAG
AGACTTCACCCTGGAGCCCCTGCGAGGAGACCTTCCCTCAGCCTTGAGTGACAAGACCCC
AAGCCTCACCCAGCAGACCCAGCCCTCAGTGAGTAGCTTGATTCACCCTAGTACCTACTC
CCCGACCATAGCTGGAGGTGGGCAGGCATCCCAGCTATGCAGGGCCTGACTGGCTGTCTT
GGTGACATGCCCGCGGTGTGTGGCGCCAAGCAAATTCAGCTCAGTTGTTCATATGGAGGA
GGCAGGCCAGGCCAGAGACAGTTCCAGTCATAGAGGTAACAGATCAGTGGTTTAGGAGTT
AGTTACAGAGATGCTGATAAGCTGAACTCACAATTCTCCTTTTCTTGTTTTTCTTCTTTC
AGTTGGAAAAGTCTGAAACGGCCCCTGCAGGATGGGCCCTGGCCCAGAGGGAACAGGGTG
CATCTTCTCCAATGACAGGTAACATCTCAAGATCAAAGTG..........

Sequence Detail Report

Gene Symbol (Gene ID)	Wnk2 (ENSMUSG00000037989)
Transcript ID	ENSMUST00000159633

		SNP Information
Strain :
Sequence Retrieve :
Exon translate : CDS Start ( 1 ) - End ( 138 ) -
Strand :	forward reverse
Show sequence :	nucleotide amino acid
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