MoG+ -Mouse Genome database with high added value-

Target CDS Information

Gene Symbol (Gene ID)

Cspp1 (ENSMUSG00000056763)

Cross Reference

GO	GO:0000922, GO:0005654, GO:0005813, ...show all
goslim_goa	GO:0005575, GO:0005622, GO:0005623, ...show all
MGI_trans_name	Cspp1-024
OTTP	OTTMUSP00000066333
OTTT	OTTMUST00000118993
UniParc	UPI0004620F27
Uniprot/SPTREMBL	A0A087WRQ0
Vega_transcript	Cspp1-024, OTTMUST00000118993
Vega_translation	178702, OTTMUSP00000066333

Definition

codon_start:3
protein_id:ENSMUSP00000140725
translation:

XNTQISAAENKSVHCNGPPRSADLDITSPFAGMLFGGEDRELTKRRKEKYRQELLEQIAE
QQKKKRREKDLAFGITTSGVQDPEKSGSACASESTPASAPCPSSF

Chromosome

Length
Position(start - end)

13,196
10,074,913 - 10,088,110

Orient to Chromosome

plus

Link

Location : (1:10074913-10088110)
/

Detail Map

name	Cspp1 (ENSMUSG00000056763)
type	gene
link	VEGA Ensembl MGI
xref
definition	locus_tag : Cspp1 note : centrosome and spindle pole associated protein 1 [Source:MGI Symbol;Acc:MGI:2681832]

name	Cspp1 (ENSMUSG00000056763)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000071087

name	Cspp1 (ENSMUSG00000056763)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000186294

name	Cspp1 (ENSMUSG00000056763)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000188449

name	Cspp1 (ENSMUSG00000056763) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	CCDS:CCDS35511.1 Uniprot/SWISSPROT:B2RX88 RefSeq_peptide:NP_080769 RefSeq_mRNA:NM_026493.3 RefSeq_mRNA_predicted:XM_006495483 RefSeq_mRNA_predicted:XM_006495484 RefSeq_peptide_predicted:XP_006495542.2 RefSeq_peptide_predicted:XP_006495545.1 RefSeq_peptide_predicted:XP_006495546.1 RefSeq_peptide_predicted:XP_006495547.1 RefSeq_peptide_predicted:XP_006495549.1 Vega_transcript:Cspp1-004 Vega_transcript:OTTMUST00000067846 UCSC:uc007ahi.1 GO:GO:0000922 GO:GO:0000922 GO:GO:0005515 GO:GO:0005515 GO:GO:0005654 GO:GO:0005654 GO:GO:0005737 GO:GO:0005813 GO:GO:0005813 GO:GO:0005819 GO:GO:0005819 GO:GO:0005874 GO:GO:0032467 GO:GO:0032467 GO:GO:0051781 GO:GO:0051781 MGI_trans_name:Cspp1-004 Vega_translation:178694 Vega_translation:OTTMUSP00000034200 goslim_goa:GO:0003674 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005737 OTTP:OTTMUSP00000034200 OTTT:OTTMUST00000067846 UniParc:UPI0000F0887C
definition	note : transcript_id=ENSMUST00000071087 protein_id : ENSMUSP00000068804 translation : MADSLDEFIEEQKAKLAKDKAELESDPPYMEMKGKASEKLSENSKILISMAKENIPPSSQQQPKGPLGIEYGLSLPLGEDYEQKKHKLKEELRQDYRRYLTQKNFLSTGETDPSTLGVSLPIDERLSAKERLKLERNREYNQFLRGKAESTEKVRQVEKNIEPKSQRNKNPISQGKSDLPLQIQTAYTHSEGPWLSRQEEGLYRQLDGEIELRSRRPLKQTKEEVGISGAEHPSLSGSAGVPERRARRANGERVLDRQHCRADRDPGVSEDMDERFRFESDFDRRLLRVYTNGRPHGSRRGYVDGDDVPEEPNTQISAAENKSVHCNGPPRSADLDITSPFAGMLFGGEDRELTKRRKEKYRQELLEQIAEQQKKKRREKDLAFGITTSGVQDPEKSPDRLKQFSLTPRHFEEMPPERPRVAFQTPPPPFSAPSSPSVPPVHSAPSHNEDLHSGLGSTLGELAHPRVLPVPLNPPPPPLLAPPASNYRTPYDDAYYFYGARNTLDPNIVYYGSGMIGGQPAPHVSAPVTHQVAPPAVNTVGQNEQKVLSDGLRNSGLVFEDKPKPSTQSLQSYQEALQEQIREREARRKKERLEKEEYEAKLEAEMRIYNPWGKGGGGAPLRDAKGNLITDLNRMHRQNIDAYHNPDARTYEDKRAVVSIDQNLATSNAENLEDSANKNSGPLQTQSSPFARGNTFGEPLSELQIKQQELYKNFLRFQIEEKRQREEAEREKLRVAEEKEEKRLAEQRARIQQEYEEEQERRREKEEEQRLKNEELIRLAEERRKEAERKKKEEEEKHNLQLQHYYERENIIGDETKHLRQPSPVVPALQNKIASKLQRPPSVDTIISSFIHESSMSRAQSPPVPARKNQLRAEEEKKNVIMELSEMRKQLRSEERRLQGRLLHLDSDDEIPMRKRERNPMDIFDMARHRVQAPVRRPSPKGLDATTFQNIHDFNELRERDSDTRVDLRLMYPDPPRDHHTLEIQQQALLREQQKRLNRIKMRRDAGADLDTICTDNAQGRRMPRDDTNDFLKNSLLESDSAFIGAYGETYPVIEDNAFPPPSQLPSARERRRNKLKGLDFDSSRLHTPQDGLSLKSISSVNVDQVRMRNEDRMRRLTEQQKKPTNTDDEGSLVDPDDIMRHLSDDGRNSAATEPWLRPGTSESLKRFMAEHLNEEQHKGPGKPGTFTWQGLSAAHA

name	Cspp1 (ENSMUSG00000056763) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Uniprot/SWISSPROT:B2RX88 RefSeq_peptide_predicted:XP_006495544.2 RefSeq_peptide_predicted:XP_011236667.1 Vega_transcript:Cspp1-017 Vega_transcript:OTTMUST00000118990 UCSC:uc011wih.1 GO:GO:0000922 GO:GO:0005515 GO:GO:0005654 GO:GO:0005737 GO:GO:0005813 GO:GO:0005819 GO:GO:0005874 GO:GO:0032467 GO:GO:0051781 MGI_trans_name:Cspp1-017 Vega_translation:178700 Vega_translation:OTTMUSP00000066332 goslim_goa:GO:0003674 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0005654 goslim_goa:GO:0005737 goslim_goa:GO:0005815 goslim_goa:GO:0005856 goslim_goa:GO:0008150 goslim_goa:GO:0043226 goslim_goa:GO:0043234 OTTP:OTTMUSP00000066332 OTTT:OTTMUST00000118990 UniParc:UPI0001E88EB2
definition	note : transcript_id=ENSMUST00000186294 protein_id : ENSMUSP00000139775 translation : MDLNCYPHLVAGHAHSYLIWRGKASEKLSENSKILISMAKENIPPSSQQQPKGPLGIEYGLSLPLGEDYEQKKHKLKEELRQDYRRYLTQGITQAKRKKNFLSTGETDPSTLGVSLPIDERLSAKERLKLERNREYNQFLRGKAESTEKVRQVEKNIEPKSQRNKNPISQGKSDLPLQIQTAYTHSEGPWLSRQEEGLYRQLDGEIELRSRRPLKQTKEEVGISGAEHPSLSGSAGVPERRARRANGERVLDRQHCRADRDPGVSEDMDERFRFESDFDRRLLRVYTNGRPHGSRRGYVDGDDVPEEPNTQISAAENKSVHCNGPPRSADLDITSPFAGMLFGGEDRELTKRRKEKYRQELLEQIAEQQKKKRREKDLAFGITTSGVQDPEKSPDRLKQFSLTPRHFEEMPPERPRVAFQTPPPPFSAPSSPSVPPVHSAPSHNEDLHSGLGSTLGELAHPRVLPVPLNPPPPPLLAPPASNYRTPYDDAYYFYGARNTLDPNIVYYGSGMIGGQPAPHVSAPVTHQVAPPAVNTVGQNEQKVLSDGLRNSGLVFEDKPKPSTQSLQSYQEALQEQIREREARRKKERLEKEEYEAKLEAEMRIYNPWGKGGGGAPLRDAKGNLISPLQTQSSPFARGNTFGEPLSELQIKQQELYKNFLRFQIEEKRQREEAEREKLRVAEEKEEKRLAEQRARIQQEYEEEQERRREKEEEQRLKNEELIRLAEERRKEAERKKKEEEEKHNLQLQHYYERENIIGDETKHLRQPSPVVPALQNKIASKLQRPPSVDTIISSFIHESSMSRAQSPPVPARKNQLRAEEEKKNVIMELSEMRKQLRSEERRLQGRLLHLDSDDEIPMRKRERNPMDIFDMARHRVQAPVRRPSPKGLDATTFQNIHDFNELRERDSDTRVDLRLMYPDPPRDHHTLEIQQQALLREQQKRLNRIKMRRDAGADLDTICTDNAQGRRMPRDDTNDFLKNSLLESDSAFIGAYGETYPVIEDNAFPPPSQLPSARERRRNKLKGLDFDSSRLHTPQDGLSLKSISSVNVDQVRMRNEDRMRRLTEQQKKPTNTDDEGSLVDPDDIMRHLSDDGRNSAATEPWLRPGTSESLKRFMAEHLNEEQHKGPGKPGTFTWQGLSAAHA

name	Cspp1 (ENSMUSG00000056763) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:Cspp1-024 Vega_transcript:OTTMUST00000118993 Uniprot/SPTREMBL:A0A087WRQ0 GO:GO:0000922 GO:GO:0005654 GO:GO:0005813 GO:GO:0005819 GO:GO:0005874 GO:GO:0032467 GO:GO:0051781 MGI_trans_name:Cspp1-024 Vega_translation:178702 Vega_translation:OTTMUSP00000066333 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005634 goslim_goa:GO:0005654 goslim_goa:GO:0005815 goslim_goa:GO:0005856 goslim_goa:GO:0008150 goslim_goa:GO:0043226 goslim_goa:GO:0043234 OTTP:OTTMUSP00000066333 OTTT:OTTMUST00000118993 UniParc:UPI0004620F27
definition	codon_start : 3 note : transcript_id=ENSMUST00000188449 protein_id : ENSMUSP00000140725 translation : XNTQISAAENKSVHCNGPPRSADLDITSPFAGMLFGGEDRELTKRRKEKYRQELLEQIAEQQKKKRREKDLAFGITTSGVQDPEKSGSACASESTPASAPCPSSF

name
type	misc_feature
link
xref
definition	note : contig AC102570.8 1..194371(-1)

name	Cspp1 (ENSMUSG00000056763)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000118991 Vega_transcript:OTTMUST00000118991 UCSC:uc056ycg.1 MGI_trans_name:Cspp1-018 OTTT:OTTMUST00000118991
definition	note : retained_intron note : transcript_id=ENSMUST00000190318

name	Cspp1 (ENSMUSG00000056763)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000118992 Vega_transcript:OTTMUST00000118992 MGI_trans_name:Cspp1-023 OTTT:OTTMUST00000118992
definition	note : retained_intron note : transcript_id=ENSMUST00000188249

name	Cspp1 (ENSMUSG00000056763)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000067966 Vega_transcript:OTTMUST00000067966 MGI_trans_name:Cspp1-010 OTTT:OTTMUST00000067966
definition	note : retained_intron note : transcript_id=ENSMUST00000153804

name	Cspp1 (ENSMUSG00000056763)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000067967 Vega_transcript:OTTMUST00000067967 MGI_trans_name:Cspp1-011 OTTT:OTTMUST00000067967
definition	note : retained_intron note : transcript_id=ENSMUST00000123261

Polymorphisms
Exon
Sequence

Polymorphisms Report

Target Strain	MSMv4 JF1v3 KJRv1 SWNv1 CHDv1 NJLv1 BLG2v1 HMIv1 BFMv1 PGN2v1

Gene Symbol (Gene ID)	Cspp1 (ENSMUSG00000056763)
Transcript ID	ENSMUST00000188449

Reports
substitution
cSNPs	0
Insertion	14
Deletion	23
SNPs	-1kb 10071028(c.-3887C>A), 10071179(c.-3736C>T), 10071318(c.-3597T>C), 10071402(c.-3513G>T), 10071404(c.-3511G>A), 10071413(c.-3502G>T), 10071450(c.-3465A>G), 10071536(c.-3379T>C), 10071984(c.-2931C>A), 10072098(c.-2817G>C), 10072126(c.-2789G>A), 10072138(c.-2777G>C), 10072212(c.-2703A>T), 10072381(c.-2534C>A), 10072386(c.-2529T>C), 10072524(c.-2391A>G), 10072899(c.-2016A>C), 10073008(c.-1907C>A), 10073036(c.-1879A>G), 10073107(c.-1808C>A), 10073194(c.-1721C>A), 10073195(c.-1720A>C), 10073228(c.-1687C>T), 10073231(c.-1684T>C), 10073309(c.-1606T>C), 10073336(c.-1579G>A), 10073462(c.-1453C>T), 10073631(c.-1284C>T), 10073708(c.-1207T>A), 10073773(c.-1142C>G), 10074079(c.-836C>G), 10074252(c.-663C>T), 10074302(c.-613C>T), 10074464(c.-451G>T), 10074466(c.-449A>G), 10074787(c.-128A>G), 10074825(c.-90G>A), 5'UTR CDS 3'UTR 10088135(c.25G>C), 10090218(c.184T>C), INTRON 10075140(c.32+194C>A), 10075144(c.32+198C>T), 10075153(c.32+207A>G), 10075443(c.32+497T>C), 10075446(c.32+500A>T), 10075498(c.32+552C>T), 10075616(c.32+670C>T), 10075839(c.32+893T>C), 10076393(c.33-779C>T), 10076509(c.33-663G>T), 10078175(c.103+933G>T), 10078364(c.103+1122C>T), 10078890(c.103+1648C>T), 10078891(c.103+1649T>G), 10079219(c.103+1977T>C), 10079328(c.103+2086C>T), 10079484(c.103+2242C>T), 10079513(c.103+2271A>G), 10079545(c.103+2303T>C), 10079691(c.103+2449A>G), 10079743(c.103+2501G>C), 10080297(c.104-1956A>G), 10080309(c.104-1944G>A), 10080419(c.104-1834C>G), 10080634(c.104-1619G>A), 10081093(c.104-1160C>T), 10081665(c.104-588T>C), 10081867(c.104-386A>G), 10082117(c.104-136C>T), 10082170(c.104-83T>C), 10082531(c.197+185A>G), 10082691(c.197+345C>T), 10082925(c.198-576T>C), 10083206(c.198-295A>T), 10083464(c.198-37A>G), 10083859(c.255+301T>A), 10083915(c.255+357A>T), 10084777(c.255+1219A>T), 10085061(c.255+1503C>T), 10085062(c.255+1504C>A), 10085157(c.255+1599T>C), 10086262(c.256-1789A>T), 10086402(c.256-1649T>A), 10086668(c.256-1383T>G), 10086843(c.256-1208C>T), 10086886(c.256-1165G>C), 10087104(c.256-947T>C), 10087671(c.256-380C>T), 10087698(c.256-353G>T), 10087747(c.256-304G>A), 10087788(c.256-263A>G), 10087796(c.256-255A>G), 10087953(c.256-98G>A), 10087976(c.256-75C>T), 10088426(c.74+242G>A), 10088840(c.75-42A>G), 10088846(c.75-36T>C), 10088861(c.75-21T>C), 10089048(c.153+88T>C), 10089236(c.153+276A>C), 10089292(c.153+332C>T), 10089355(c.153+395C>T), 10089650(c.154-538T>C), 10089758(c.154-430C>A), 10090140(c.154-48G>T), +1kb 10090896(c.2786T>C), 10091003(c.2893G>A), 10091219(c.3109T>C), 10091242(c.3132A>G), 10091405(c.3295T>G), 10091427(c.3317A>T), 10091658(c.3548A>G), 10091735(c.3625C>A), 10092935(c.4825G>A), 10092939(c.4829C>T), 10092993(c.4883C>T), 10093051(c.4941G>T), 10093152(c.5042T>C), 10093480(c.5370G>T), 10093675(c.5565C>T), 10093957(c.5847C>T), 10093976(c.5866G>T), 10094028(c.5918C>T), 10094179(c.6069G>T), 10094219(c.6109T>C), 10094221(c.6111G>C), 10094365(c.6255T>G), 10094595(c.6485A>C), 10094630(c.6520C>G), 10094667(c.6557G>A), 10094685(c.6575C>G), 10094982(c.6872T>C),
Insertions	-1kb 10073336 (c.-1579_-1578insTTAA), 10073818 (c.-1097_-1096insA), 5'UTR CDS 3'UTR INTRON 10075134 (c.32+189dupT), 10076185 (c.33-980_33-979dupCC), 10078211 (c.103+976_103+977dupTT), 10078364 (c.103+1122_103+1123insG), 10083206 (c.198-295_198-294insTTT), 10085714 (c.255+2168_255+2169dupTT), 10087092 (c.256-959_256-958insA), 10089721 (c.154-465_154-464dupCT), +1kb 10090624 (c.2514_2515insG), 10091874 (c.3764_3765insTGTG), 10092628 (c.4518dupT), 10094312 (c.6202_*6203insTTG),
Deletions	-1kb 10070681 (c.-4233_-4231delACA), 10071069 (c.-3845delT), 10071342 (c.-3572_-3569delCTGT), 10071919 (c.-2995_-2994delAA), 10072289 (c.-2625_-2623delAAT), 10072358 (c.-2556_-2553delATAT), 10072612 (c.-2302_-2301delAT), 10072637 (c.-2277_-2276delCC), 10073167 (c.-1747_-1745delTAT), 5'UTR CDS 3'UTR INTRON 10077871 (c.103+630_103+638delAGAGAGATA), 10079524 (c.103+2288delA), 10080013 (c.104-2239delG), 10080438 (c.104-1814delT), 10080496 (c.104-1748delT), 10080504 (c.104-1748_104-1747delTG), 10082746 (c.197+409delT), 10085440 (c.255+1900_255+1902delCTG), 10089467 (c.153+508_153+510delTAT), 10089477 (c.153+518_153+521delAATA), +1kb 10090540 (c.2431delT), 10092614 (c.4505_4508delCGGG), 10092677 (c.4568_4573delTTCCTT), 10093851 (c.5742_*5743delTT),
coding sequence substitutions
premature termination by the nucleotide substitution	0
synonymous num	0
non-synonymous num	0
synonymous substitutions
non-synonymous substitutions
B6 transcript (ENSMUST00000188449)	NTQISAAENKSVHCNGPPRSADLDITSPFAGMLFGGEDRELTKRRKEKYRQELLEQIAEQ QKKKRREKDLAFGITTSGVQDPEKSGSACASESTPASAPCPSSF*
MSMv4 transcript	NTQISAAENKSVHCNGPPRSADLDITSPFAGMLFGGEDRELTKRRKEKYRQELLEQIAEQ QKKKRREKDLAFGITTSGVQDPEKSGSACASESTPASAPCPSSF*
homology	100.00 (105 / 105)

Exon Detail Report

Target Strain	MSMv4 JF1v3 KJRv1 SWNv1 CHDv1 NJLv1 BLG2v1 HMIv1 BFMv1 PGN2v1

Gene Symbol (Gene ID)	Cspp1 (ENSMUSG00000056763)
Transcript ID	ENSMUST00000188449


..........GATCTTATAAGTGAAGGTTCTTCAGGCCTGTTCTGTATCAGATTGTTTTA
AAATATTTTCTGTTTTGCTTCTTCATTCTTTCATGGGGTTTACTGTGCCAATTTTTAATT
TAAAAACCTTGGTTTTATGTATAATGAAATAATTCCCAGAATTTATGTGTCTTAATGAAA
AAACAATTTTGTTTTGAGTTCTGCCTGCAAACTTAAGTGTGTACAGGGATGTTGTCTGCT
CCATGTCCAGAATAAGACTTGGCCTGCTGACAGTGCCTGTAATTACCATATTAACCAATT
GATAAAAATCTGTGAGTGTGTTATCTTATATCTATAGCTGGAGAGATGGTTCAGAAGTTA
AGAGCTCTTCCTGATTTTCCAGAGGACCTGTGTTCAGTTTCCAGCACCCACGTTGAATGA
CCTACAACCTCTTCTAATTTGAGTTTTAGTTGATCTGACACCTTCTTCTGGGCTCCTCAG
GCATCAGCAAAGACATGGCTTGTGTACACACATGAGGGTATACACACACACACACACACA
CACACACACAGACATAAAAATTAGAATAATTTTTTAAAAATTAAAAAGCATTAAATTAAA
AAATTAAATATTTAAATGTAATATTGAAATAAAAAGTTGTATAGAAATAATTTACAATAA
TTTCAGTTAAAAAACATGTATTAGGGTCTGGCTTTATAGCATTATACAGAACTTTCCTAG
TATATTCTTATATATGAAAACAACAGCAAACTTGAATGTAAATTCTTACTATTTCTTGCT
AGCTAGCAGATCATATTTGAAGCAAATCTAATTTGAATTAACTTTAGGATGCAGTTTCAG
TAAACTGATAGCACAATCTTTTGCTCACCTTAATGCTAACACATGAGACTGTAGAACCCT
AGAGATATAAGGTCCACTGTATATGGGCCGTGCTTTATAAGCTAATGTGTTTTGAAGGCC
GCATGGGAGCAGACGAGGGTATGTGGATGGGGATGATGTCCCAGAAGAGC
CAAACACACAGATCTCAGCTGCTGAAAATAAAAG
GTACGTGACAGCAATGATCTCCTTG..........TGCTCTCTCATATTGTTTGTTTTAG
TGTTCACTGTAATGGACCACCCAGATCTGCTGATCTCGATATCACAAGTCCATTTGCAGGCATGCTCTTTG
GTATGTCCAGCACTTTCAGCTGATT..........GTTTATTTCTTTATTTTTTATCCAG
GAGGTGAAGATCGAGAACTTACCAAGAGAAGGAAGGAGAAATATAGGCAAGAACTACTAGAACAGATAGCTGAGCAACAGAAGAAGAAGAGACG
GTAATGAAAAGCTTGCATTTAGCAG..........TTTACAAAATCTTAATTTTGTTTAG
AGAAAAAGATTTAGCATTTGGAATTACAACTTCTGGAGTACAAGACCCTGAAAAATCG
GTAAGAGTTCTTGGCATCTTTTAGT..........TGTTTTTGGTTTTCTTTTGCTATAG
GGTTCTGCCTGTGCCTCTGAATCCACCCCCGCCTCCGCTCCTTGCCCCTCCAGCTTCTAACTATCGAACTCCTTACGATGATGCCTACTATTTTTACGGTGCCAGAAATACACTGGATCCCAATATTGTATACT
GTGAGTTTTCTATATGTTCTATAAA..........TGTCCTTTTTTCTGTTTCCCTTTAG
ATGGTTCAGGAATGATTGGAGGACAGCCTGCCCCTCATGTCTCTGCCCCTGTCACTCACCAGGTAGCACCGCCAGCTGT
GTAAGTCTTAAAATAAAATAAAGTT..........ATTGAAATTGTTTATTTGCTCTTAG
GAATACTGTTGGACAGAATGAACAGAAAGTCCTTAGTGATGGACTCAGGAATTCAGGACTGGTCTTTG
AGGATAAGCCAAAACCTTCTACACAGTCGCTTCAGTCTTACCAAGAAGCTTTGCAGGAGC
AGGTATTCATTCATTCATTTATTCATTCACTGTTGACTGACTGTAGACTGAAGGGGAGAA
CAATAGCAGGCAGTACGGTAAGCTTTGAAGTGGGGATGCTGGAATTGCTGTAGGAAACAG
TAGGCTTGTCTGGGACAGTTAGGACTGGGTGTGTAGTTAATATTTGAGCTGCATGTTAGT
TTCTAGACGTTCCTGGTAGATTTAGGGAGTTTTATTATTTTTTTTTATTTTCCTACGTCT
TCTAAGACCTTCTTATTTATTTGGTGTGTGTCTGTGTGCATGTGAGTTTCCTTCCACCAT
ATAGTTTTTGGGGGGGATCAAATTCAGGTAGTCAGGGTTGGTAGCAGGTTCTTTGACCTT
CTGATCCATCTTTTTGGCCCTAGAAAAACCTTTAGTGAGCTGTTGATCAGTTCAGTTCAG
CTAGGAGGTGCTGAGGCTCTGAGCCTGTGAGGGGAGAAGGAGGATGTTGGCAGACAGTTG
TGATATTTAATGCACAGGGTACGCATGAGAGGATGAGAAAGCAGAGCAGAGGGTTTAAAC
AGGATCTGTAGTGTCCAGTGTAAGGAGACTGATGAGGCCACAGTCCAGTAGGGAACATCT
TAGTAGAATGCTTACAAGAAACACATTGGCATCTCCCATACTTTATGTTGGTTAAAGAAA
ACTTACTTAGGAGCTTTTGGGAGTGAGATTCAAGGTGTGGGTCCATATCTAAATTGAGGA
CTTTCTTGGGGGAATTCTATTGGATTTCTTGGTAAACTATGGGTTTAGTTTTGTTTTCTT
GGGGTAAGGTTCCATCTGGATCAGGCTGCCCTTGAACTCATTATGTGGTGAAGAAAGGAT
TACCTTGAAATTGTAGTCATCCTGTTTGCTTCTCCCTCCTGAGGGCTCGGAATACAGGTG
CACCCCAGAGTGCTCTGTTTTATGTGGTGCAGAGGATGGC..........

No.	Exon / Intron	Start	End	Start Phase	End Phase	Length	Sequence
	5' upstream sequence						..........GATCTTATAAGTGAAGGTTCTTCAGGCCTGTTCTGTATCAGATTGTTTTA AAATATTTTCTGTTTTGCTTCTTCATTCTTTCATGGGGTTTACTGTGCCAATTTTTAATT TAAAAACCTTGGTTTTATGTATAATGAAATAATTCCCAGAATTTATGTGTCTTAATGAAA AAACAATTTTGTTTTGAGTTCTGCCTGCAAACTTAAGTGTGTACAGGGATGTTGTCTGCT CCATGTCCAGAATAAGACTTGGCCTGCTGACAGTGCCTGTAATTACCATATTAACCAATT GATAAAAATCTGTGAGTGTGTTATCTTATATCTATAGCTGGAGAGATGGTTCAGAAGTTA AGAGCTCTTCCTGATTTTCCAGAGGACCTGTGTTCAGTTTCCAGCACCCACGTTGAATGA CCTACAACCTCTTCTAATTTGAGTTTTAGTTGATCTGACACCTTCTTCTGGGCTCCTCAG GCATCAGCAAAGACATGGCTTGTGTACACACATGAGGGTATACACACACACACACACACA CACACACACAGACATAAAAATTAGAATAATTTTTTAAAAATTAAAAAGCATTAAATTAAA AAATTAAATATTTAAATGTAATATTGAAATAAAAAGTTGTATAGAAATAATTTACAATAA TTTCAGTTAAAAAACATGTATTAGGGTCTGGCTTTATAGCATTATACAGAACTTTCCTAG TATATTCTTATATATGAAAACAACAGCAAACTTGAATGTAAATTCTTACTATTTCTTGCT AGCTAGCAGATCATATTTGAAGCAAATCTAATTTGAATTAACTTTAGGATGCAGTTTCAG TAAACTGATAGCACAATCTTTTGCTCACCTTAATGCTAACACATGAGACTGTAGAACCCT AGAGATATAAGGTCCACTGTATATGGGCCGTGCTTTATAAGCTAATGTGTTTTGAAGGCC GCATGGGAGCAGACGAGGGTATGTGGATGGGGATGATGTCCCAGAAGAGC
1	EXON 1	10,074,913	10,074,946	-	2	34	CAAACACACAGATCTCAGCTGCTGAAAATAAAAG
	INTRON 1 - 2	10,074,947	10,077,171			2,225	GTACGTGACAGCAATGATCTCCTTG..........TGCTCTCTCATATTGTTTGTTTTAG
2	EXON 2	10,077,172	10,077,242	2	1	71	TGTTCACTGTAATGGACCACCCAGATCTGCTGATCTCGATATCACAAGTCCATTTGCAGG CATGCTCTTTG
	INTRON 2 - 3	10,077,243	10,082,252			5,010	GTATGTCCAGCACTTTCAGCTGATT..........GTTTATTTCTTTATTTTTTATCCAG
3	EXON 3	10,082,253	10,082,346	1	2	94	GAGGTGAAGATCGAGAACTTACCAAGAGAAGGAAGGAGAAATATAGGCAAGAACTACTAG AACAGATAGCTGAGCAACAGAAGAAGAAGAGACG
	INTRON 3 - 4	10,082,347	10,083,500			1,154	GTAATGAAAAGCTTGCATTTAGCAG..........TTTACAAAATCTTAATTTTGTTTAG
4	EXON 4	10,083,501	10,083,558	2	0	58	AGAAAAAGATTTAGCATTTGGAATTACAACTTCTGGAGTACAAGACCCTGAAAAATCG
	INTRON 4 - 5	10,083,559	10,088,050			4,492	GTAAGAGTTCTTGGCATCTTTTAGT..........TGTTTTTGGTTTTCTTTTGCTATAG
5	EXON 5	10,088,051	10,088,184	0	-	134	GGTTCTGCCTGTGCCTCTGAATCCACCCCCGCCTCCGCTCCTTGCCCCTCCAGCTTCTAA CTATCGAACTCCTTACGATGATGCCTACTATTTTTACGGTGCCAGAAATACACTGGATCC CAATATTGTATACT
	INTRON 5 - 6	10,088,185	10,088,881			697	GTGAGTTTTCTATATGTTCTATAAA..........TGTCCTTTTTTCTGTTTCCCTTTAG
6	EXON 6	10,088,882	10,088,960	-	-	79	ATGGTTCAGGAATGATTGGAGGACAGCCTGCCCCTCATGTCTCTGCCCCTGTCACTCACC AGGTAGCACCGCCAGCTGT
	INTRON 6 - 7	10,088,961	10,090,187			1,227	GTAAGTCTTAAAATAAAATAAAGTT..........ATTGAAATTGTTTATTTGCTCTTAG
7	EXON 7	10,090,188	10,090,255	-	-	68	GAATACTGTTGGACAGAATGAACAGAAAGTCCTTAGTGATGGACTCAGGAATTCAGGACT GGTCTTTG
	3' upstream sequence						AGGATAAGCCAAAACCTTCTACACAGTCGCTTCAGTCTTACCAAGAAGCTTTGCAGGAGC AGGTATTCATTCATTCATTTATTCATTCACTGTTGACTGACTGTAGACTGAAGGGGAGAA CAATAGCAGGCAGTACGGTAAGCTTTGAAGTGGGGATGCTGGAATTGCTGTAGGAAACAG TAGGCTTGTCTGGGACAGTTAGGACTGGGTGTGTAGTTAATATTTGAGCTGCATGTTAGT TTCTAGACGTTCCTGGTAGATTTAGGGAGTTTTATTATTTTTTTTTATTTTCCTACGTCT TCTAAGACCTTCTTATTTATTTGGTGTGTGTCTGTGTGCATGTGAGTTTCCTTCCACCAT ATAGTTTTTGGGGGGGATCAAATTCAGGTAGTCAGGGTTGGTAGCAGGTTCTTTGACCTT CTGATCCATCTTTTTGGCCCTAGAAAAACCTTTAGTGAGCTGTTGATCAGTTCAGTTCAG CTAGGAGGTGCTGAGGCTCTGAGCCTGTGAGGGGAGAAGGAGGATGTTGGCAGACAGTTG TGATATTTAATGCACAGGGTACGCATGAGAGGATGAGAAAGCAGAGCAGAGGGTTTAAAC AGGATCTGTAGTGTCCAGTGTAAGGAGACTGATGAGGCCACAGTCCAGTAGGGAACATCT TAGTAGAATGCTTACAAGAAACACATTGGCATCTCCCATACTTTATGTTGGTTAAAGAAA ACTTACTTAGGAGCTTTTGGGAGTGAGATTCAAGGTGTGGGTCCATATCTAAATTGAGGA CTTTCTTGGGGGAATTCTATTGGATTTCTTGGTAAACTATGGGTTTAGTTTTGTTTTCTT GGGGTAAGGTTCCATCTGGATCAGGCTGCCCTTGAACTCATTATGTGGTGAAGAAAGGAT TACCTTGAAATTGTAGTCATCCTGTTTGCTTCTCCCTCCTGAGGGCTCGGAATACAGGTG CACCCCAGAGTGCTCTGTTTTATGTGGTGCAGAGGATGGC..........

Sequence Detail Report

Gene Symbol (Gene ID)	Cspp1 (ENSMUSG00000056763)
Transcript ID	ENSMUST00000188449

		SNP Information
Strain :
Sequence Retrieve :
Exon translate : CDS Start ( 1 ) - End ( 105 ) -
Strand :	forward reverse
Show sequence :	nucleotide amino acid
Color information