VariantTable
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name
Simc1 (ENSMUSG00000043183)
type
gene
link
VEGA
Ensembl
MGI
xref
definition
locus_tag
: Simc1
note
: SUMO-interacting motifs containing 1 [Source:MGI Symbol;Acc:MGI:2442599]
name
Simc1 (ENSMUSG00000043183)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000121401
name
Simc1 (ENSMUSG00000043183)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000118072
name
Simc1 (ENSMUSG00000043183)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000159721
name
Simc1 (ENSMUSG00000043183)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000138869
name
Simc1 (ENSMUSG00000043183)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
CCDS:
CCDS26528.2
RefSeq_peptide:
NP_795961
RefSeq_mRNA:
NM_176987.4
RefSeq_mRNA_predicted:
XM_011244528.1
RefSeq_mRNA_predicted:
XM_011244530.1
RefSeq_mRNA_predicted:
XM_011244531.1
RefSeq_peptide_predicted:
XP_011242830.1
RefSeq_peptide_predicted:
XP_011242831.1
RefSeq_peptide_predicted:
XP_011242832.1
RefSeq_peptide_predicted:
XP_011242833.1
Vega_transcript:
OTTMUST00000068548
Vega_transcript:
Simc1-001
Uniprot/SPTREMBL:
E9Q6E9
UCSC:uc007qoe.2
EMBL:
AC155262
EMBL:
AC165145
GO:
GO:0005575
GO:
GO:0008150
GO:
GO:0032184
MGI_trans_name:
Simc1-001
Vega_translation:
214480
Vega_translation:
OTTMUSP00000034689
goslim_goa:
GO:0003674
goslim_goa:
GO:0005575
goslim_goa:
GO:0008150
goslim_goa:
GO:0032182
OTTP:
OTTMUSP00000034689
OTTT:
OTTMUST00000068548
UniParc:
UPI0001611554
definition
note
: transcript_id=ENSMUST00000121401
protein_id
: ENSMUSP00000113676
translation
: MEDFIVISDDSGSESSAGTRSGRARRLRRALSRTPGALPRRTVDFIDLTRENRARTKDRNGLCVIDLTRNEEENRPIATLDLTLEPVASSQKEPTSLQTCTSLSGKEVMEAHEDRGSQPAAQRIINNDPVDLDLLEENLFEGSRPPTSISQDSVYPPEPNCSSITYKGDLSFLTSLQLSSDVSSFSSTSNQRASLPCPQQDVPCQSQGLLCPLQALSCPQTASPCPPRASSCPPQALSCPPQALSCPSQTLQCQLQALPQPPQEVPCSTQNVPCPQQNMPSTPQGLSWHPRHTLYPYQDTLGLPQDVPGRPQNMSYPQDVTQLQDMPWSLHDMPLSLQDVLQSLQDVPPLLGDVPPSPEVMQLPGYVTQTSRDVIQSPAGVTQSLGSMMQSPGSVTQSLRSVMQSSGSVTQSLRSVMQSSGSVTQSLRSVMQSSGSVMQSPGGVTQSLRSVTQSPGGVMQSPGGVMQSPRDVMQSPRDVMQSPRDVMQSPRGVTQSLGSMMQSPGGVMQSLRSVMQSSGGVTQSLRSVMQSPGGVMQSPGGVTQSPRGMIKSPGMMLSPGDVIQSLNSVPQSSRDRMQSAGHVPSASGDAIQSPGGMSPTSRDRMQSPGGVSLATEDSIQLPGGVPLSSDVIQSQGGVPLSSKDRMQSPGGVPPSSGDMIQSQGGVPQSLGDAIQSAGGVPQSSGDAIQSPGGVSLATGDSIQLPGGVPLSSGDVIQSQGGVPRSSRDRMQSPGGVPPSSGGVIQSPGGVSPASGDAIQSPGSVLPASGDAIQSAGGVLLASGDAIQSPRSVPQSPSGTLRSPGNMSESLGDTPNLSGDVSNSPQALLDLARDRPKSSPNDVQNRDTPMDISASSSSSCSANPQSRQSEFKLDKVPWLTITDSSARREKSLPQLANPGSAQIQGQIPQVGVYNRPCLHRLKYFLRPPVHHLFFQTLIPDKDTRESKGQKLEPIPHRRLRMVTNTIEENFPLGTVQFLMDFVSPQHYPPREIVAHIVQKILLSGSETVDVLKEAYMLLMKIQQLHPANAKTVEWDWKLLTYVMEEEGQTLPGRVLFLRYVVQTLEDDFQQILRRQRQHLQQSIANTVLSCDKQPHNVRDVIKWLVKAVTENELTPPQDETQTSPRTGVLKTSSDHLSPRPNQNKNTNQLIVCQLQRMLSIAVEVDRTPTCSSNKIAEMMFGFVLDIPERSQREMFFTTMESHLLRCKVLEIIFLHSCETPTRLPLSLAQTLYFLNNSTSLLKCQSDKTQWQTWDELVEHLQFLLSSYQHVLREHLRSSVIDRKDLIIKRIKPKPQQGDDITVLDVEKQIEAFRSRLVHILGEPLVPQLQDKVHLLKLLLFYAADLNPDTEPASEH
name
Simc1 (ENSMUSG00000043183)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
Vega_transcript:
OTTMUST00000068549
Vega_transcript:
Simc1-002
Uniprot/SPTREMBL:
E9PYI6
UCSC:uc007qoe.2
EMBL:
AC155262
EMBL:
AC165145
GO:
GO:0005575
GO:
GO:0008150
GO:
GO:0032184
MGI_trans_name:
Simc1-002
Vega_translation:
214481
Vega_translation:
OTTMUSP00000034690
goslim_goa:
GO:0003674
goslim_goa:
GO:0005575
goslim_goa:
GO:0008150
goslim_goa:
GO:0032182
OTTP:
OTTMUSP00000034690
OTTT:
OTTMUST00000068549
UniParc:
UPI0001611555
definition
note
: transcript_id=ENSMUST00000118072
protein_id
: ENSMUSP00000112376
translation
: MEDFIVISDDSGSESSAGTRSGRARRLRRALSRTPGALPRRTVSKGQKLEPIPHRRLRMVTNTIEENFPLGTVQFLMDFVSPQHYPPREIVAHIVQKILLSGSETVDVLKEAYMLLMKIQQLHPANAKTVEWDWKLLTYVMEEEGQTLPGRVLFLRYVVQTLEDDFQQILRRQRQHLQQSIANTVLSCDKQPHNVRDVIKWLVKAVTENELTPPQDETQTSPRTGVLKTSSDHLSPRPNQNKNTNQLIVCQLQRMLSIAVEVDRTPTCSSNKIAEMMFGFVLDIPERSQREMFFTTMESHLLRCKVLEIIFLHSCETPTRLPLSLAQTLYFLNNSTSLLKCQSDKTQWQTWDELVEHLQFLLSSYQHVLREHLRSSVIDRKDLIIKRIKPKPQQGDDITVLDVEKQIEAFRSRLVHILGEPLVPQLQDKVHLLKLLLFYAADLNPDTEPASEH
name
Simc1 (ENSMUSG00000043183)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
Vega_transcript:
OTTMUST00000087312
Vega_transcript:
Simc1-008
Uniprot/SPTREMBL:
E0CX51
EMBL:
AC155262
EMBL:
AC165145
GO:
GO:0005575
GO:
GO:0008150
GO:
GO:0032184
MGI_trans_name:
Simc1-008
Vega_translation:
214482
Vega_translation:
OTTMUSP00000047379
goslim_goa:
GO:0003674
goslim_goa:
GO:0005575
goslim_goa:
GO:0008150
goslim_goa:
GO:0032182
OTTP:
OTTMUSP00000047379
OTTT:
OTTMUST00000087312
UniParc:
UPI0001DD34D4
definition
note
: transcript_id=ENSMUST00000159721
protein_id
: ENSMUSP00000124921
translation
: MEDFIVISDDSGSESSAGTRSGRARRLRRALSRTPGALPRRTVGQTLPGRVLFLRYVVQTLEDDFQQILRRQRQHLQQSIANTVLSCDKQPHNVRDVIKWLVKAVTENELTPPQDETQTSPRTGVLKTSSDHLSPRPNQNKNTNQL
name
Simc1 (ENSMUSG00000043183)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
Vega_transcript:
OTTMUST00000068550
Vega_transcript:
Simc1-003
Uniprot/SPTREMBL:
E0CY56
EMBL:
AC155262
EMBL:
AC165145
GO:
GO:0005575
GO:
GO:0008150
GO:
GO:0032184
MGI_trans_name:
Simc1-003
Vega_translation:
214483
Vega_translation:
OTTMUSP00000047380
goslim_goa:
GO:0003674
goslim_goa:
GO:0005575
goslim_goa:
GO:0008150
goslim_goa:
GO:0032182
OTTP:
OTTMUSP00000047380
OTTT:
OTTMUST00000068550
UniParc:
UPI0001DD34D5
definition
note
: transcript_id=ENSMUST00000138869
protein_id
: ENSMUSP00000124474
translation
: MEDFIVISDDSGSESSAGTRSGRARRLRRALSRTPGALPRRTVAASSQCQDSGVGLETAHLCHGGRGTNSAWTSSLSTLRSANPGR
name
type
misc_feature
link
xref
definition
note
: contig AC165145.2 35211..181942(1)
Location
chromosome :
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
X
(Build: mm10)
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Annotation:
Gene
mRNA
CDS
genetic markers
Tracks
RefSeq genes :
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Gene, mRNA, CDS :
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MSM BAC end pairs :
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B6N BAC end pairs :
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MSMv4 :
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JF1v3 :
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KJRv1 :
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SWNv1 :
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CHDv1 :
not show
show
NJLv1 :
not show
show
BLG2v1 :
not show
show
HMIv1 :
not show
show
BFMv1 :
not show
show
PGNv1 :
not show
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