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Target CDS Information

Gene Symbol (Gene ID) Dst (ENSMUSG00000026131)
Cross Reference
EMBL AC123072, AC124386, AC127433
GO GO:0005509, GO:0005515, GO:0007010, ...show all
goslim_goa GO:0000902, GO:0003674, GO:0005575, ...show all
MGI_trans_name Dst-009
OTTP OTTMUSP00000065440
OTTT OTTMUST00000116998
UniParc UPI0004620FDD
Uniprot/SPTREMBL S4R1Y6
Vega_transcript Dst-009, OTTMUST00000116998
Vega_translation 178908, OTTMUSP00000065440
Definition protein_id:ENSMUSP00000138426
translation:
EELWPWLTETQRIISQLPAPALEYETLRRQQEEHRQLRELIAEHKPHIDKMNKTGPQLLE
LSPKEGIYIQEKYVAADTLYSQIKEDVKKRAVVLDEAISQSTQFHDKIDQILESLERIAE
RLRQPPSISAEVEKIKEQIGENKSVSVDMEKLQPLYETLRQRGEEMIARSEGTEKDVSAR
AVQDKLDQMVFIWGSIHTLVEEREAKLLDVMELAEKFWCDHMSLVVTIKDTQDFIRDLED
PGIDPSVVKQQQEAAEAIREEIDGLQEELDMVITLGSELIAACGEPDKPIVKKSIDELNS
AWDSLNKAWKDRVDRLEEAMQAAVQYQDGLQGIFDWVDIAGNKLATMSPIGTDLETVKQQ
IEELKQFKSEAYQQQIEMERLNHQAELLLKKVTEEADKHTVQDPLMELKLIWDSLDERIV
SRQHKLEGALLALGQFQHALDELLAWLTHTKGLLSEQKPVGGDPKAIEIELAKHHVLQND
VLAHQSTVEAVNKAGNDLIESSEGEEASNLQYKLRILNQRWQDILEKTDQRKQQLDSALR
QAKGFHGEIEDLQQWLTDTERHLLASKPLGGLPETAKEQLNAHMEVCTAFAIKEETYKSL
MLRGQQMLARCPRSAETNIDQDITNLKEKWESVKSKLNEKKTKLEEALHLAMNFHNSLQD
FINWLTQAEQTLNVASRPSLILDTILFQIDEHKVFANEVNSHREQIIELDKTGTHLKYFS
QKQDVVLIKNLLISVQSRWEKVVQRLVERGRSLDEARKRAKQFHEAWSKLMEWLEESEKS
LDSELEIANDPDKIKAQLVQHKEFQKSLGGKHSVYDTTNRTGRSLKEKTSLADDNLKLDN
MLSELRDKWDTICGKSVERQNKLEEALLFSGQFTDALQALIDWLYRVEPQLAEDQPVHGD
IDLVMNLIDNHKVFQKELGKRTSSVQALKRSARELIEGSRDDSSWVRVQMQELSTRWETV
CALSISKQTRLESALQQAEEFHSVVHTLLEWLAEAEQTLRFHGALPDDEDALRTLIEQHK
EFMKRLEEKRAELSKATGMGDALLAVCHPDSITTIKHWITIIQARFEEVLAWAKQHQQRL
AGALAGLIAKQELLETLLAWLQWAETTLTEKDKEVIPQEIEEVKTLIAEHQTFMEEMTRK
QPDVDKVTKTYKRRATDPPSLQSHIPVLDKGRAGRKRFPASGFYPSGSQTQIETKNPRVN
LLVSKWQQVWLLALERRRKLNDALDRLEELREFANFDFDIWRKKYMRWMNHKKSRVMDFF
RRIDKDQDGKITRQEFIDGILSSKFPTSRLEMSAVADIFDRDGDGYIDYYEFVAALHPNK
DAYKPITDADKIEDEVTRQVAKCKCAKRFQVEQIGDNKYRFFLGNQFGDSQQLRLVRILR
STVMVRVGGGWMALDEFLVKNDPCRAKGRTNMELREKFILADGASQGMAAFRPRGRRSRP
SSRGASPNRSTSASSHACQAASPPVPAAASTPKILHPLTRNYGKPWLANSKMSTPCKAAE
CPDFPVSSAEGTPIQGSKLRLPGYLSGKGFHSGEDSALITTAAARVRTQFAESRKTPSRP
GSRAGSKAGSRASSRRGSDASDFDISEIQSVCSDVETVPQTHRPVPRAGSRPSTAKPSKI
PTPQRRSPASKLDKSSKR

Chromosome 1
Length
Position(start - end)
49755
34257836 - 34307592
Orient to Chromosome plus
Link Location : (1:34257836-34307592)
/

Detail Map


 

Report

Polymorphisms Report

Target Strain  MSMv4  JF1v3  KJRv1  SWNv1  CHDv1  NJLv1  BLG2v1  HMIv1  BFMv1  PGN2v1
Gene Symbol (Gene ID) Dst (ENSMUSG00000026131)
Transcript ID ENSMUST00000182018
Reports
substitution
cSNPs25
Insertion45
Deletion69
SNPs
-1kb
5'UTR
CDS
3'UTR
INTRON
+1kb
Insertions
-1kb
5'UTR
CDS
3'UTR
INTRON
+1kb
Deletions
-1kb
5'UTR
CDS
3'UTR
INTRON
+1kb
coding sequence substitutions
premature termination by the nucleotide substitution0
synonymous num23
non-synonymous num2
synonymous substitutions 34260223 (p.Gly55Gly), 34260340 (p.Leu94Leu), 34260343 (p.Asp95Asp), 34262244 (p.Ser178Ser), 34263418 (p.Gln232Gln), 34264542 (p.Ile262Ile), 34266937 (p.Lys358Lys), 34268818 (p.Lys451Lys), 34270899 (p.Ile499Ile), 34275285 (p.Ala668Ala), 34275702 (p.Arg703Arg), 34275844 (p.Arg751Arg), 34278031 (p.Ala766Ala), 34287273 (p.Asp941Asp), 34290466 (p.Ala1104Ala), 34291873 (p.Ser1160Ser), 34294515 (p.Arg1273Arg), 34295467 (p.Thr1337Thr), 34295518 (p.Ile1354Ile), 34299768 (p.Thr1382Thr), 34306593 (p.Ser1532Ser), 34306626 (p.Ala1543Ala), 34307412 (p.Asp1579Asp),
non-synonymous substitutions 34262249 (p.Arg180Lys), 34303018 (p.Ala1469Thr),
B6 transcript
(ENSMUST00000182018)
EELWPWLTETQRIISQLPAPALEYETLRRQQEEHRQLRELIAEHKPHIDKMNKTGPQLLE
LSPKEGIYIQEKYVAADTLYSQIKEDVKKRAVVLDEAISQSTQFHDKIDQILESLERIAE
RLRQPPSISAEVEKIKEQIGENKSVSVDMEKLQPLYETLRQRGEEMIARSEGTEKDVSAR
AVQDKLDQMVFIWGSIHTLVEEREAKLLDVMELAEKFWCDHMSLVVTIKDTQDFIRDLED
PGIDPSVVKQQQEAAEAIREEIDGLQEELDMVITLGSELIAACGEPDKPIVKKSIDELNS
AWDSLNKAWKDRVDRLEEAMQAAVQYQDGLQGIFDWVDIAGNKLATMSPIGTDLETVKQQ
IEELKQFKSEAYQQQIEMERLNHQAELLLKKVTEEADKHTVQDPLMELKLIWDSLDERIV
SRQHKLEGALLALGQFQHALDELLAWLTHTKGLLSEQKPVGGDPKAIEIELAKHHVLQND
VLAHQSTVEAVNKAGNDLIESSEGEEASNLQYKLRILNQRWQDILEKTDQRKQQLDSALR
QAKGFHGEIEDLQQWLTDTERHLLASKPLGGLPETAKEQLNAHMEVCTAFAIKEETYKSL
MLRGQQMLARCPRSAETNIDQDITNLKEKWESVKSKLNEKKTKLEEALHLAMNFHNSLQD
FINWLTQAEQTLNVASRPSLILDTILFQIDEHKVFANEVNSHREQIIELDKTGTHLKYFS
QKQDVVLIKNLLISVQSRWEKVVQRLVERGRSLDEARKRAKQFHEAWSKLMEWLEESEKS
LDSELEIANDPDKIKAQLVQHKEFQKSLGGKHSVYDTTNRTGRSLKEKTSLADDNLKLDN
MLSELRDKWDTICGKSVERQNKLEEALLFSGQFTDALQALIDWLYRVEPQLAEDQPVHGD
IDLVMNLIDNHKVFQKELGKRTSSVQALKRSARELIEGSRDDSSWVRVQMQELSTRWETV
CALSISKQTRLESALQQAEEFHSVVHTLLEWLAEAEQTLRFHGALPDDEDALRTLIEQHK
EFMKRLEEKRAELSKATGMGDALLAVCHPDSITTIKHWITIIQARFEEVLAWAKQHQQRL
AGALAGLIAKQELLETLLAWLQWAETTLTEKDKEVIPQEIEEVKTLIAEHQTFMEEMTRK
QPDVDKVTKTYKRRATDPPSLQSHIPVLDKGRAGRKRFPASGFYPSGSQTQIETKNPRVN
LLVSKWQQVWLLALERRRKLNDALDRLEELREFANFDFDIWRKKYMRWMNHKKSRVMDFF
RRIDKDQDGKITRQEFIDGILSSKFPTSRLEMSAVADIFDRDGDGYIDYYEFVAALHPNK
DAYKPITDADKIEDEVTRQVAKCKCAKRFQVEQIGDNKYRFFLGNQFGDSQQLRLVRILR
STVMVRVGGGWMALDEFLVKNDPCRAKGRTNMELREKFILADGASQGMAAFRPRGRRSRP
SSRGASPNRSTSASSHACQAASPPVPAAASTPKILHPLTRNYGKPWLANSKMSTPCKAAE
CPDFPVSSAEGTPIQGSKLRLPGYLSGKGFHSGEDSALITTAAARVRTQFAESRKTPSRP
GSRAGSKAGSRASSRRGSDASDFDISEIQSVCSDVETVPQTHRPVPRAGSRPSTAKPSKI
PTPQRRSPASKLDKSSKR*
MSMv4 transcript
EELWPWLTETQRIISQLPAPALEYETLRRQQEEHRQLRELIAEHKPHIDKMNKTGPQLLE
LSPKEGIYIQEKYVAADTLYSQIKEDVKKRAVVLDEAISQSTQFHDKIDQILESLERIAE
RLRQPPSISAEVEKIKEQIGENKSVSVDMEKLQPLYETLRQRGEEMIARSEGTEKDVSAK
AVQDKLDQMVFIWGSIHTLVEEREAKLLDVMELAEKFWCDHMSLVVTIKDTQDFIRDLED
PGIDPSVVKQQQEAAEAIREEIDGLQEELDMVITLGSELIAACGEPDKPIVKKSIDELNS
AWDSLNKAWKDRVDRLEEAMQAAVQYQDGLQGIFDWVDIAGNKLATMSPIGTDLETVKQQ
IEELKQFKSEAYQQQIEMERLNHQAELLLKKVTEEADKHTVQDPLMELKLIWDSLDERIV
SRQHKLEGALLALGQFQHALDELLAWLTHTKGLLSEQKPVGGDPKAIEIELAKHHVLQND
VLAHQSTVEAVNKAGNDLIESSEGEEASNLQYKLRILNQRWQDILEKTDQRKQQLDSALR
QAKGFHGEIEDLQQWLTDTERHLLASKPLGGLPETAKEQLNAHMEVCTAFAIKEETYKSL
MLRGQQMLARCPRSAETNIDQDITNLKEKWESVKSKLNEKKTKLEEALHLAMNFHNSLQD
FINWLTQAEQTLNVASRPSLILDTILFQIDEHKVFANEVNSHREQIIELDKTGTHLKYFS
QKQDVVLIKNLLISVQSRWEKVVQRLVERGRSLDEARKRAKQFHEAWSKLMEWLEESEKS
LDSELEIANDPDKIKAQLVQHKEFQKSLGGKHSVYDTTNRTGRSLKEKTSLADDNLKLDN
MLSELRDKWDTICGKSVERQNKLEEALLFSGQFTDALQALIDWLYRVEPQLAEDQPVHGD
IDLVMNLIDNHKVFQKELGKRTSSVQALKRSARELIEGSRDDSSWVRVQMQELSTRWETV
CALSISKQTRLESALQQAEEFHSVVHTLLEWLAEAEQTLRFHGALPDDEDALRTLIEQHK
EFMKRLEEKRAELSKATGMGDALLAVCHPDSITTIKHWITIIQARFEEVLAWAKQHQQRL
AGALAGLIAKQELLETLLAWLQWAETTLTEKDKEVIPQEIEEVKTLIAEHQTFMEEMTRK
QPDVDKVTKTYKRRATDPPSLQSHIPVLDKGRAGRKRFPASGFYPSGSQTQIETKNPRVN
LLVSKWQQVWLLALERRRKLNDALDRLEELREFANFDFDIWRKKYMRWMNHKKSRVMDFF
RRIDKDQDGKITRQEFIDGILSSKFPTSRLEMSAVADIFDRDGDGYIDYYEFVAALHPNK
DAYKPITDADKIEDEVTRQVAKCKCAKRFQVEQIGDNKYRFFLGNQFGDSQQLRLVRILR
STVMVRVGGGWMALDEFLVKNDPCRAKGRTNMELREKFILADGASQGMAAFRPRGRRSRP
SSRGASPNRSTSASSHACQAASPPVPAATSTPKILHPLTRNYGKPWLANSKMSTPCKAAE
CPDFPVSSAEGTPIQGSKLRLPGYLSGKGFHSGEDSALITTAAARVRTQFAESRKTPSRP
GSRAGSKAGSRASSRRGSDASDFDISEIQSVCSDVETVPQTHRPVPRAGSRPSTAKPSKI
PTPQRRSPASKLDKSSKR*
homology99.88 (1639 / 1639)

Exon Detail Report

Target Strain  MSMv4  JF1v3  KJRv1  SWNv1  CHDv1  NJLv1  BLG2v1  HMIv1  BFMv1  PGN2v1
Gene Symbol (Gene ID) Dst (ENSMUSG00000026131)
Transcript ID ENSMUST00000182018
No. Exon / Intron Start End Start Phase End Phase Length Sequence
5' upstream sequence
..........ACACATCTGAGCTATTAAAGTTTCCTTAACTGACCCAGGTTGAACATTTA
ACCAATTCAGTCAGTATCAACTGTAGTGTTGTTACGATGGCATGCCGGCTCATGTCAGTT
ACAAGGTATGTCATCTATGGGTCATAGGCTCCCAGAACATTTGTAACTTTTAAGCTGAAA
CTAAACCCAAAATACATAGATCTTCATTCTGTGTGAAGTTACTCACTGGAAGCCAGTAAG
GGAACAGTGAGCTAAGTAGCTAAGGAAACAGTAGGTATATGTAGTTTTAATAATTCTGCA
GACTGATAGAAAACCATCCACAGGTAATAGTAGTTAGCTCCACTTCTATACAGACATCTT
GGGGAGCTTAAAGAAATGACTGCATGCTAATTCTTATGGTAAATACAGGCCCCAAATAAA
GATATATAAATATCCATACCTCAAATTACATTTTAGATAAAATACATTCTCTTTCAGGCA
GAGCATGCATAAAATTATAAATTATCCGTACCTACTTTGATTTTGTGCAATTAATTTTAT
GTTAAATTGATTTTTTTTATGACTCCATTTGTGAAAGATAATCTTTCTTTTTCCTTAGAT
CATCGTGTAACTGTTGGTAGACTTGTGTGAAACTTACTTTCTAAACCTGAGAACATTGTA
AGAGTACTAGAGAGTTCTGCTTCTTGTATCTTAGTGCCTGCACGTAAAAATCAGAGTGCT
CTCTCTTATTAACATGAAAGTGTGCATAGAGACAGTTAATCTGAACAGATTTCGTTCATT
TATTTATTCATTTCACATACACCTGCCCTCCCTGTGCCAAACGTACAGAACTGGTCAAAA
CATACTAAGCCACAGCTGCCGTCCTGACAAGCGTGTTTCCTCGTCTTGCTTTCTAGAAAA
AGCTGGACAAGGTACTGAAGAAGTACGATGCCGTCTGCCAGATCAACTCAGAGAGGCACC
TGCAGCTGGAGCGGGCACAGTCCCTCGTTAGCCAGTTCTGGGAGACCTAT
1 EXON 1 34257836 34257940 - 0 105
GAGGAACTTTGGCCCTGGCTAACGGAAACACAACGAATCATCTCTCAGCTGCCTGCCCCA
GCCCTGGAGTACGAGACTCTGAGGAGACAGCAAGAGGAGCACCGG
INTRON 1 - 2 34257941 34260163 2223
GTGAGAACGGGAGGCTGAGCCCTAG..........TGAGAGACTGTTTGGCTCATTACAG
2 EXON 2 34260164 34260367 0 0 204
CAACTTCGAGAACTGATAGCCGAGCACAAGCCACACATAGATAAGATGAACAAGACTGGT
CCACAGCTATTGGAACTGAGCCCAAAGGAAGGCATTTATATCCAAGAAAAGTATGTGGCA
GCCGACACCCTCTACAGTCAAATTAAAGAAGATGTCAAAAAGCGAGCTGTGGTTCTCGAC
GAGGCCATTTCTCAGTCCACCCAG
INTRON 2 - 3 34260368 34262019 1652
GTAATCCTCTCCACACCAGGAAAAG..........AACAGCCCATCGTTTCTACTCGCAG
3 EXON 3 34262020 34262251 0 1 232
TTTCATGACAAGATCGACCAGATCCTTGAGAGCCTGGAACGCATTGCGGAGCGTCTGCGG
CAGCCGCCATCCATCTCCGCCGAGGTGGAGAAGATCAAGGAGCAGATTGGTGAAAATAAG
AGCGTGTCCGTGGACATGGAGAAGCTGCAGCCGCTATACGAGACTCTGAGGCAGAGGGGA
GAGGAGATGATCGCCAGATCCGAGGGCACTGAAAAAGACGTATCAGCCAAAG
INTRON 3 - 4 34262252 34263263 1012
GTGACAAGATGGGCTCAGCTTGCTT..........TCACTGACGCTGTTTTGCTGTGTAG
4 EXON 4 34263264 34263490 1 0 227
CTGTACAGGATAAGTTGGACCAAATGGTTTTCATCTGGGGAAGCATCCACACGCTGGTCG
AAGAACGGGAAGCCAAACTGCTGGATGTGATGGAGCTAGCGGAGAAATTCTGGTGCGATC
ACATGTCGCTGGTCGTTACCATCAAAGACACTCAGGATTTCATCCGGGACCTGGAGGATC
CCGGAATCGACCCCTCGGTCGTAAAGCAGCAGCAGGAAGCTGCAGAG
INTRON 4 - 5 34263491 34264524 1034
GTAAGTAACAGACCTGGGTGAACTA..........TCTGAGCCTCTGCTTTGGATTCCAG
5 EXON 5 34264525 34264647 0 0 123
GCAATCAGAGAGGAGATCGACGGCCTGCAGGAGGAGCTGGACATGGTCATCACGCTAGGC
TCAGAGCTCATCGCTGCATGTGGGGAGCCTGACAAACCCATTGTCAAGAAGAGCATTGAC
GAG
INTRON 5 - 6 34264648 34264749 102
GTACCCGAGGCTCGTTTGTGACTTA..........AAGGACTTTAACATTTGTTTCGTAG
6 EXON 6 34264750 34264851 0 0 102
CTAAATTCAGCATGGGATTCTCTAAATAAAGCTTGGAAGGACCGGGTGGACAGACTGGAA
GAGGCCATGCAAGCTGCCGTTCAGTACCAGGACGGATTGCAG
INTRON 6 - 7 34264852 34266856 2005
GTGAGGTGGCCGCCGTGTCCTCTGG..........AACACATGGAAAATGTGTCTTGCAG
7 EXON 7 34266857 34266958 0 0 102
GGAATATTCGACTGGGTTGACATCGCAGGCAACAAGTTAGCCACAATGTCTCCCATTGGA
ACAGACCTGGAGACCGTCAAACAGCAGATTGAAGAGCTGAAG
INTRON 7 - 8 34266959 34268228 1270
GTAGGTGTGGAGCTCCCAGCTGGTA..........TGTTTTGTTTTTTGTTTTTCCGCAG
8 EXON 8 34268229 34268402 0 0 174
CAATTTAAGTCAGAAGCTTATCAACAACAGATAGAAATGGAAAGGCTGAACCATCAAGCA
GAACTGTTGCTGAAGAAAGTAACAGAGGAGGCAGACAAGCACACAGTCCAGGACCCGCTG
ATGGAGCTGAAGTTGATCTGGGACAGCCTGGACGAGCGAATTGTCAGCAGACAG
INTRON 8 - 9 34268403 34268734 332
GTAAACACTGAGACCTGTGTGCATG..........ATTTTTCTTCTCTGTTTCTTGGCAG
9 EXON 9 34268735 34268890 0 0 156
CACAAGCTCGAGGGTGCTCTCTTAGCACTGGGTCAGTTCCAGCACGCCCTGGACGAGCTC
CTCGCATGGCTGACACACACCAAGGGCTTGCTAAGTGAACAGAAACCCGTTGGAGGAGAC
CCGAAAGCCATTGAGATTGAACTGGCTAAGCATCAC
INTRON 9 - 10 34268891 34270827 1937
GTACGTACCACTGCTGCCCGTCACC..........TGAATGATCACGCTAACATTTTCAG
10 EXON 10 34270828 34271025 0 0 198
GTGCTCCAAAACGACGTCTTAGCCCACCAGTCCACGGTAGAAGCCGTCAACAAAGCAGGA
AATGATCTCATAGAGTCGAGTGAAGGCGAAGAAGCAAGCAACCTCCAGTACAAGCTCAGA
ATTCTCAATCAGCGCTGGCAGGATATTTTGGAAAAGACAGATCAAAGAAAGCAGCAGCTG
GACAGCGCCTTGCGCCAG
INTRON 10 - 11 34271026 34271354 329
GTGACTAGAGAGGCGGAGAGAGTCC..........ACTTAAAAACCACCTGTCACTGCAG
11 EXON 11 34271355 34271483 0 0 129
GCCAAAGGGTTCCACGGTGAAATCGAAGATTTGCAACAGTGGCTGACGGACACAGAGCGT
CATCTCTTGGCATCTAAACCTCTGGGAGGTCTCCCAGAGACAGCCAAGGAGCAGCTTAAC
GCACATATG
INTRON 11 - 12 34271484 34274167 2684
GTACGTATGGTATTTTCTACAGCCC..........ACATGAGGGCGGTCTCGTTTCTTAG
12 EXON 12 34274168 34274338 0 0 171
GAAGTCTGCACCGCCTTTGCCATCAAGGAAGAGACGTACAAGAGCCTGATGCTGAGGGGG
CAGCAGATGCTTGCAAGGTGTCCCCGATCTGCGGAGACCAACATTGACCAAGACATCACC
AACCTGAAAGAGAAGTGGGAATCCGTGAAGAGCAAACTCAACGAGAAGAAA
INTRON 12 - 13 34274339 34275204 866
GTGAGTGCTTTGATCAGCATGACAG..........CACACTGAGTCCTCTTCCTTTACAG
13 EXON 13 34275205 34275360 0 0 156
ACAAAGTTGGAGGAGGCCCTGCACTTGGCCATGAACTTCCACAACTCCCTCCAGGACTTC
ATCAACTGGCTTACCCAGGCAGAGCAAACTCTGAACGTGGCTTCTCGGCCAAGTCTTATC
TTGGACACCATCTTGTTTCAAATTGATGAGCACAAG
INTRON 13 - 14 34275361 34275672 312
GTACGTCAGAACGCTTTGGAAAGCC..........TTGCATTCTCTTCTGTTGGAGAAAG
14 EXON 14 34275673 34275879 0 0 207
GTCTTTGCGAACGAAGTGAATTCTCACCGAGAGCAGATAATAGAGTTGGACAAGACTGGA
ACCCACCTGAAGTATTTCAGTCAGAAACAAGATGTCGTGCTCATCAAGAACCTGCTCATC
AGCGTGCAGAGTCGGTGGGAAAAGGTGGTGCAGCGCCTGGTAGAGAGAGGGAGATCCCTG
GACGAAGCCAGGAAGAGGGCCAAGCAG
INTRON 14 - 15 34275880 34278019 2140
GTAACAAACTCGGCTGCGGTTCCCC..........GGGTAAATATGGGTCTCTTTAACAG
15 EXON 15 34278020 34278139 0 0 120
TTCCATGAAGCTTGGAGCAAGCTGATGGAATGGCTGGAAGAGTCAGAAAAATCTCTGGAT
TCTGAGCTGGAAATCGCCAACGATCCAGACAAAATCAAAGCCCAGCTGGTCCAGCACAAG
INTRON 15 - 16 34278140 34282422 4283
GTGAGCTCCACATGGACAAAGCACG..........AGCTCTTTCCTTGTTAAACACGTAG
16 EXON 16 34282423 34282592 0 2 170
GAGTTTCAGAAATCACTCGGAGGCAAACATTCTGTCTACGATACCACCAACCGAACTGGA
CGTTCTCTGAAGGAGAAAACCTCCCTGGCAGATGACAACCTGAAGCTGGACAACATGCTG
AGTGAACTTAGGGACAAATGGGACACCATCTGTGGAAAGTCTGTGGAAAG
INTRON 16 - 17 34282593 34284258 1666
GTAGGATGTCCGCGCATTGGTGTCT..........ATTCATCTCCTTTTTTTCCCCCCAG
17 EXON 17 34284259 34284418 2 0 160
ACAAAACAAATTGGAGGAAGCTCTGTTATTTTCTGGACAGTTCACAGATGCCCTGCAGGC
CCTCATTGATTGGCTGTATCGAGTTGAGCCCCAGCTGGCAGAAGACCAGCCTGTCCACGG
GGACATTGACTTGGTGATGAACCTGATCGATAATCACAAG
INTRON 17 - 18 34284419 34287186 2768
GTATAGCCACCCAGAACGTCCTTTT..........ATGAAGGTCAGTATGGTTTCCCCAG
18 EXON 18 34287187 34287381 0 0 195
GTCTTCCAGAAAGAGCTGGGGAAGAGGACCAGCAGCGTGCAGGCCCTGAAGCGCTCTGCC
AGGGAACTCATCGAAGGCAGCCGAGACGACTCCTCCTGGGTCAGGGTCCAGATGCAGGAG
CTAAGCACCCGCTGGGAGACCGTGTGTGCACTCTCCATATCAAAGCAGACGCGGCTAGAG
TCAGCCCTGCAACAG
INTRON 18 - 19 34287382 34287890 509
GTAAAGTCCACATTACTGAGAGCTC..........TTTCTGCGTGTGTGCTAACTGTTAG
19 EXON 19 34287891 34288019 0 0 129
GCAGAGGAATTCCACTCTGTGGTCCACACCCTCTTGGAGTGGCTGGCAGAAGCAGAGCAA
ACCCTGCGTTTCCATGGTGCTCTCCCAGATGATGAGGATGCTCTCCGGACTCTCATTGAG
CAACATAAA
INTRON 19 - 20 34288020 34289523 1504
GTGAGTAACTTCCAGTACAAAACGG..........GAAGTGTCTGCTCTGCCCGCTGCAG
20 EXON 20 34289524 34289667 0 0 144
GAGTTCATGAAGAGACTGGAAGAGAAAAGGGCAGAACTAAGTAAGGCCACCGGTATGGGG
GACGCTCTTCTGGCCGTCTGCCACCCTGACTCCATTACCACCATTAAGCACTGGATCACG
ATCATCCAGGCCAGGTTTGAAGAG
INTRON 20 - 21 34289668 34290358 691
GTCAGTGCGTCTGACGTCATCTGGG..........AGCGAGCTGTGTGTCCGTGCAACAG
21 EXON 21 34290359 34290547 0 0 189
GTGCTGGCCTGGGCGAAGCAGCACCAGCAGAGGTTAGCAGGGGCGCTGGCTGGGCTCATC
GCCAAGCAGGAGCTGCTGGAGACTCTGCTGGCATGGCTACAGTGGGCAGAAACCACACTG
ACCGAGAAAGATAAGGAAGTTATCCCCCAGGAGATCGAAGAGGTGAAAACCCTCATTGCA
GAACACCAG
INTRON 21 - 22 34290548 34291786 1239
GTAAAGAAACTCAATCCATCCCCTC..........TAATTGACACCGTTTTCCCTTTCAG
22 EXON 22 34291787 34291916 0 1 130
ACCTTCATGGAAGAAATGACCAGAAAACAGCCCGACGTTGATAAAGTTACCAAGACCTAT
AAGAGGAGGGCCACTGACCCTCCCTCATTACAGTCTCACATCCCCGTCTTGGACAAGGGA
CGAGCCGGAA
INTRON 22 - 23 34291917 34293319 1403
GTAAGCTGGGGGCAGGTTATTTAAA..........CTGACCTGCAGTTGTGTTTTACCAG
23 EXON 23 34293320 34293483 1 0 164
GGAAACGCTTCCCAGCCTCGGGCTTCTATCCATCTGGCTCACAGACGCAAATCGAGACCA
AGAACCCCAGGGTTAACCTGCTGGTGAGCAAGTGGCAGCAGGTCTGGCTCCTGGCCTTGG
AAAGGAGGAGGAAGCTCAACGACGCCCTGGACAGGCTGGAGGAG
INTRON 23 - 24 34293484 34294383 900
GTCAGAAACTCCCGCTCTGTCCCTG..........CAGCCAAAACTTTCGCTTTTTCTAG
24 EXON 24 34294384 34294546 0 1 163
CTGAGGGAATTTGCCAACTTCGATTTCGACATCTGGCGGAAAAAATACATGAGGTGGATG
AACCATAAGAAATCGAGAGTGATGGATTTCTTCCGGAGAATTGATAAGGACCAGGATGGG
AAGATCACTCGGCAGGAATTCATCGACGGGATTCTCTCCTCCA
INTRON 24 - 25 34294547 34295153 607
GTAAGTGCCGAGACGTGCAATAGCC..........ACTAGCACCGCTTGGTACATTGCAG
25 EXON 25 34295154 34295308 1 0 155
AGTTTCCTACCAGTCGCCTGGAGATGAGCGCCGTGGCAGACATCTTTGACAGAGATGGTG
ATGGGTACATTGACTACTATGAATTCGTGGCCGCTCTGCATCCAAACAAAGATGCGTACA
AACCCATCACGGATGCTGACAAAATTGAGGACGAG
INTRON 25 - 26 34295309 34295461 153
GTACTCACTGTTGGCCTTCTGCTGC..........AATGTCATACCTTTGTCTTTGACAG
26 EXON 26 34295462 34295536 0 0 75
GTCACGAGGCAGGTAGCCAAGTGTAAGTGTGCCAAGCGATTCCAAGTTGAACAGATTGGT
GATAACAAATACAGG
INTRON 26 - 27 34295537 34296741 1205
GTGAGTGTCTCAGTTGACTCCTGCC..........CTTGCATTTTTCATTGTTTTATCAG
27 EXON 27 34296742 34296759 0 0 18
TTCTTCCTGGGAAATCAG
INTRON 27 - 28 34296760 34299720 2961
GTATAAACCAGTGGACTCTCAAGTT..........GGTCCTTTCTCTCTCTGCTGCCTAG
28 EXON 28 34299721 34299838 0 1 118
TTTGGAGACTCCCAGCAGCTGCGACTGGTTCGGATCCTGCGAAGCACGGTGATGGTTCGT
GTTGGAGGCGGATGGATGGCTCTGGATGAGTTCTTAGTGAAAAATGATCCCTGCAGGG
INTRON 28 - 29 34299839 34302829 2991
GTAAGGAGACCCTTTTGTCGAGCTG..........CTTTTGCCGCCTGCGTGCAATCCAG
29 EXON 29 34302830 34303032 1 0 203
CTAAAGGAAGGACCAACATGGAGCTGCGGGAAAAGTTCATCCTAGCAGACGGTGCCAGCC
AGGGTATGGCCGCCTTCCGACCGCGAGGCCGCCGATCTCGCCCTTCATCCAGAGGAGCTT
CCCCCAACAGATCCACTTCCGCGTCGAGTCATGCCTGCCAGGCAGCCTCCCCACCGGTGC
CTGCTGCCACCAGCACACCCAAG
INTRON 29 - 30 34303033 34303420 388
GTAGGACTCCAGGCTGTGGCCCTCT..........TTTGATGTACCGTTGTTCCATGCAG
30 EXON 30 34303421 34303531 0 0 111
ATTCTCCATCCTTTAACACGCAATTATGGTAAACCATGGTTGGCAAACAGCAAAATGTCA
ACTCCCTGTAAAGCAGCAGAATGCCCCGACTTTCCCGTGTCATCCGCAGAG
INTRON 30 - 31 34303532 34306527 2996
GTATCGTAAGGCCCCAGACTGCAGT..........CTCTCTGCACTGGTCGCACACACAG
31 EXON 31 34306528 34306651 0 1 124
GGCACACCAATCCAGGGAAGCAAGCTGCGACTACCCGGGTACCTGTCAGGGAAAGGCTTC
CACTCCGGGGAGGACAGCGCCTTGATAACGACGGCAGCTGCCAGAGTCCGAACACAGTTC
GCTG
INTRON 31 - 32 34306652 34307329 678
GTGAGTATATGATATCTCTTTCCCT..........TCTGTCCTCTGTCCTCTCTCTCCAG
32 EXON 32 34307330 34308404 1 - 1075
AGTCCAGGAAGACTCCCAGCCGCCCAGGGAGCAGAGCCGGAAGCAAAGCCGGAAGCAGAG
CCAGCAGCCGCCGAGGCAGCGATGCGTCCGACTTTGACATTTCAGAAATCCAGTCTGTGT
GCTCAGACGTGGAGACCGTCCCACAGACACACAGACCTGTGCCCCGAGCAGGTTCTCGGC
CATCCACAGCCAAGCCTTCTAAAATCCCCACACCCCAGAGGAGGTCACCTGCCAGCAAAT
TAGACAAGTCTTCGAAGAGATAGTGCAATTGGCTCCAACCAGCCCTTCCCCGAGCATTTA
CTATTTAAGCGAATGATGTAAAATACGATGTAGAAATTACTGTGAAATATTGCAGGAGGC
AAGTTTTAAATTCTGCAGATGGCCTTATTTGTGTATTTGTCTTTTTATTTGATCTGTATC
ACTTTTTTGGTCAGATTTTCTGGGGGTAAAAGTCACATCATATGTGATAAGGAAGAAAGA
ACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAAAAGTCAGTT
ACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAGCTGACAT
TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAAGCAGGG
AATTGTATTTTTATTTATTTTTTATTTTTATTTTTTGCGATGCTCTAACTGTAAATTAGA
CAGAAGACAAAAGGAAAAACACAACAAGACGCAGTTCTTCGAGCAGCCTCCAAGAGAGAA
TCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCAGTACCATGGCGTTCACGCACCTCCC
AGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCTGGGCATCCGCCGTCTCT
ACCATAGGGATGCGGTGCTCCGTGCATCCGTGTACACGTGCAAGGTTTTGCTCTGCTTGG
GTGGACAGCAGCCCCTGTACCACTGAACTCATTTTGTAACAGCAATTTCGCTTGCAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAGCTCTGAAATAAAACACATCCCTTAACTA
3' upstream sequence
CATCGCTATGGAATTAATTTTTTTTCCCCAGGGAAAACTGGTGTATTTTTTTATGAACAG
TATCAATTTGGAGTGACCAAAAGATACTTGAAAAAAAAAGTGGGCTTATTTTGATTTCTC
ATCTGGAATAATCATGTTCTGGTATTATATCTACTTATATTTAATAAATATGCATTTTAA
TTTATTATGTATACTCACATACTAGAGAAAGATATTAGTATGCATTTAATAAAACATATT
CACTTGAACGTATGGAATACTTGGTTATTTGAAATGAGCTTTTCTGTTTGTTTTAAATAA
AGGGTAAATAATAGAAATGGTAATAATAGATGATAGTCTGACAGGAAAGGCTGGAAGGTG
TGTAAGGAGGTAGAGCTAATGGGAAGCACCCATTCTATAAGTATTTAAGAAATCCTAGCT
GGTATCAATGACATTTAGGCTACTACAGTGCTCCTGTCCTCAAATAATCAAGGGAGATGT
CTTAGGGTTTTACTGCTGTGAAGAGACACCTTGACCAAGGCAACTCTTATAAGGACAACA
TTTAATTGGAGCTGGCTTACAGGTTCAGAAGTTCAGTCCATCATCATCAAGGTGGGAACA
GGGCAGCATCCAGGCGGGCATGGTGCAGGAGGAGCTGAGAGTTCTACAGCTTCATCTGAA
GGCTGCTAGAAGTCTGGCTTCCAGGCAACTAGGATGAGGATCTTAAAGCCCACACCCATA
GTGCAACGCCTACTCCAACAAGGCCATACCTTCTAATGGTGCCACTCCCTAGCCCAAGCA
CACAGAAACCATCCCAAGAGACTTCATTATGAATCACAAAAAAAGCATCAACAGGGCAGG
ATATTTAACAAGATGACGACTTTATTGTTAATATTGTGATACTCTAATATAATTTTTGTT
TTTTTGTTTTGGGGGGGAGGTTGGTCTTGGCATTGGTTTTCTGGTTTGTTTGTTTCTTTG
TTTTATCAAGTTATACAGTTTTCCTAAATAAGAAAATAGC..........

Sequence Detail Report

Gene Symbol (Gene ID) Dst (ENSMUSG00000026131)
Transcript ID ENSMUST00000182018
SNP Information
Strain :
Sequence Retrieve :
Exon translate :
CDS Start ( 1 ) - End ( 1639 )
-
Strand : forward reverse
Show sequence : nucleotide amino acid
Color information