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Target CDS Information

Gene Symbol (Gene ID) Dst (ENSMUSG00000026131)
Cross Reference
EMBL AC123072, AC124386, AC127433
GO GO:0005509, GO:0005515, GO:0007010, ...show all
goslim_goa GO:0000902, GO:0003674, GO:0005575, ...show all
MGI_trans_name Dst-009
OTTP OTTMUSP00000065440
OTTT OTTMUST00000116998
UniParc UPI0004620FDD
Uniprot/SPTREMBL S4R1Y6
Vega_transcript Dst-009, OTTMUST00000116998
Vega_translation 178908, OTTMUSP00000065440
Definition protein_id:ENSMUSP00000138426
translation:
EELWPWLTETQRIISQLPAPALEYETLRRQQEEHRQLRELIAEHKPHIDKMNKTGPQLLE
LSPKEGIYIQEKYVAADTLYSQIKEDVKKRAVVLDEAISQSTQFHDKIDQILESLERIAE
RLRQPPSISAEVEKIKEQIGENKSVSVDMEKLQPLYETLRQRGEEMIARSEGTEKDVSAR
AVQDKLDQMVFIWGSIHTLVEEREAKLLDVMELAEKFWCDHMSLVVTIKDTQDFIRDLED
PGIDPSVVKQQQEAAEAIREEIDGLQEELDMVITLGSELIAACGEPDKPIVKKSIDELNS
AWDSLNKAWKDRVDRLEEAMQAAVQYQDGLQGIFDWVDIAGNKLATMSPIGTDLETVKQQ
IEELKQFKSEAYQQQIEMERLNHQAELLLKKVTEEADKHTVQDPLMELKLIWDSLDERIV
SRQHKLEGALLALGQFQHALDELLAWLTHTKGLLSEQKPVGGDPKAIEIELAKHHVLQND
VLAHQSTVEAVNKAGNDLIESSEGEEASNLQYKLRILNQRWQDILEKTDQRKQQLDSALR
QAKGFHGEIEDLQQWLTDTERHLLASKPLGGLPETAKEQLNAHMEVCTAFAIKEETYKSL
MLRGQQMLARCPRSAETNIDQDITNLKEKWESVKSKLNEKKTKLEEALHLAMNFHNSLQD
FINWLTQAEQTLNVASRPSLILDTILFQIDEHKVFANEVNSHREQIIELDKTGTHLKYFS
QKQDVVLIKNLLISVQSRWEKVVQRLVERGRSLDEARKRAKQFHEAWSKLMEWLEESEKS
LDSELEIANDPDKIKAQLVQHKEFQKSLGGKHSVYDTTNRTGRSLKEKTSLADDNLKLDN
MLSELRDKWDTICGKSVERQNKLEEALLFSGQFTDALQALIDWLYRVEPQLAEDQPVHGD
IDLVMNLIDNHKVFQKELGKRTSSVQALKRSARELIEGSRDDSSWVRVQMQELSTRWETV
CALSISKQTRLESALQQAEEFHSVVHTLLEWLAEAEQTLRFHGALPDDEDALRTLIEQHK
EFMKRLEEKRAELSKATGMGDALLAVCHPDSITTIKHWITIIQARFEEVLAWAKQHQQRL
AGALAGLIAKQELLETLLAWLQWAETTLTEKDKEVIPQEIEEVKTLIAEHQTFMEEMTRK
QPDVDKVTKTYKRRATDPPSLQSHIPVLDKGRAGRKRFPASGFYPSGSQTQIETKNPRVN
LLVSKWQQVWLLALERRRKLNDALDRLEELREFANFDFDIWRKKYMRWMNHKKSRVMDFF
RRIDKDQDGKITRQEFIDGILSSKFPTSRLEMSAVADIFDRDGDGYIDYYEFVAALHPNK
DAYKPITDADKIEDEVTRQVAKCKCAKRFQVEQIGDNKYRFFLGNQFGDSQQLRLVRILR
STVMVRVGGGWMALDEFLVKNDPCRAKGRTNMELREKFILADGASQGMAAFRPRGRRSRP
SSRGASPNRSTSASSHACQAASPPVPAAASTPKILHPLTRNYGKPWLANSKMSTPCKAAE
CPDFPVSSAEGTPIQGSKLRLPGYLSGKGFHSGEDSALITTAAARVRTQFAESRKTPSRP
GSRAGSKAGSRASSRRGSDASDFDISEIQSVCSDVETVPQTHRPVPRAGSRPSTAKPSKI
PTPQRRSPASKLDKSSKR

Chromosome 1
Length
Position(start - end)
49,755
34,257,836 - 34,307,592
Orient to Chromosome plus
Link Location : (1:34257836-34307592)
/

Detail Map


 

Report

Polymorphisms Report

Target Strain  MSMv4  JF1v3  KJRv1  SWNv1  CHDv1  NJLv1  BLG2v1  HMIv1  BFMv1  PGN2v1
Gene Symbol (Gene ID) Dst (ENSMUSG00000026131)
Transcript ID ENSMUST00000182018
Reports
substitution
cSNPs25
Insertion45
Deletion69
SNPs
-1kb
5'UTR
CDS
3'UTR
INTRON
+1kb
Insertions
-1kb
5'UTR
CDS
3'UTR
INTRON
+1kb
Deletions
-1kb
5'UTR
CDS
3'UTR
INTRON
+1kb
coding sequence substitutions
premature termination by the nucleotide substitution0
synonymous num23
non-synonymous num2
synonymous substitutions 34260223 (p.Gly55Gly), 34260340 (p.Leu94Leu), 34260343 (p.Asp95Asp), 34262244 (p.Ser178Ser), 34263418 (p.Gln232Gln), 34264542 (p.Ile262Ile), 34266937 (p.Lys358Lys), 34268818 (p.Lys451Lys), 34270899 (p.Ile499Ile), 34275285 (p.Ala668Ala), 34275702 (p.Arg703Arg), 34275844 (p.Arg751Arg), 34278031 (p.Ala766Ala), 34287273 (p.Asp941Asp), 34290466 (p.Ala1104Ala), 34291873 (p.Ser1160Ser), 34294515 (p.Arg1273Arg), 34295467 (p.Thr1337Thr), 34295518 (p.Ile1354Ile), 34299768 (p.Thr1382Thr), 34306593 (p.Ser1532Ser), 34306626 (p.Ala1543Ala), 34307412 (p.Asp1579Asp),
non-synonymous substitutions 34262249 (p.Arg180Lys), 34303018 (p.Ala1469Thr),
B6 transcript
(ENSMUST00000182018)
EELWPWLTETQRIISQLPAPALEYETLRRQQEEHRQLRELIAEHKPHIDKMNKTGPQLLE
LSPKEGIYIQEKYVAADTLYSQIKEDVKKRAVVLDEAISQSTQFHDKIDQILESLERIAE
RLRQPPSISAEVEKIKEQIGENKSVSVDMEKLQPLYETLRQRGEEMIARSEGTEKDVSAR
AVQDKLDQMVFIWGSIHTLVEEREAKLLDVMELAEKFWCDHMSLVVTIKDTQDFIRDLED
PGIDPSVVKQQQEAAEAIREEIDGLQEELDMVITLGSELIAACGEPDKPIVKKSIDELNS
AWDSLNKAWKDRVDRLEEAMQAAVQYQDGLQGIFDWVDIAGNKLATMSPIGTDLETVKQQ
IEELKQFKSEAYQQQIEMERLNHQAELLLKKVTEEADKHTVQDPLMELKLIWDSLDERIV
SRQHKLEGALLALGQFQHALDELLAWLTHTKGLLSEQKPVGGDPKAIEIELAKHHVLQND
VLAHQSTVEAVNKAGNDLIESSEGEEASNLQYKLRILNQRWQDILEKTDQRKQQLDSALR
QAKGFHGEIEDLQQWLTDTERHLLASKPLGGLPETAKEQLNAHMEVCTAFAIKEETYKSL
MLRGQQMLARCPRSAETNIDQDITNLKEKWESVKSKLNEKKTKLEEALHLAMNFHNSLQD
FINWLTQAEQTLNVASRPSLILDTILFQIDEHKVFANEVNSHREQIIELDKTGTHLKYFS
QKQDVVLIKNLLISVQSRWEKVVQRLVERGRSLDEARKRAKQFHEAWSKLMEWLEESEKS
LDSELEIANDPDKIKAQLVQHKEFQKSLGGKHSVYDTTNRTGRSLKEKTSLADDNLKLDN
MLSELRDKWDTICGKSVERQNKLEEALLFSGQFTDALQALIDWLYRVEPQLAEDQPVHGD
IDLVMNLIDNHKVFQKELGKRTSSVQALKRSARELIEGSRDDSSWVRVQMQELSTRWETV
CALSISKQTRLESALQQAEEFHSVVHTLLEWLAEAEQTLRFHGALPDDEDALRTLIEQHK
EFMKRLEEKRAELSKATGMGDALLAVCHPDSITTIKHWITIIQARFEEVLAWAKQHQQRL
AGALAGLIAKQELLETLLAWLQWAETTLTEKDKEVIPQEIEEVKTLIAEHQTFMEEMTRK
QPDVDKVTKTYKRRATDPPSLQSHIPVLDKGRAGRKRFPASGFYPSGSQTQIETKNPRVN
LLVSKWQQVWLLALERRRKLNDALDRLEELREFANFDFDIWRKKYMRWMNHKKSRVMDFF
RRIDKDQDGKITRQEFIDGILSSKFPTSRLEMSAVADIFDRDGDGYIDYYEFVAALHPNK
DAYKPITDADKIEDEVTRQVAKCKCAKRFQVEQIGDNKYRFFLGNQFGDSQQLRLVRILR
STVMVRVGGGWMALDEFLVKNDPCRAKGRTNMELREKFILADGASQGMAAFRPRGRRSRP
SSRGASPNRSTSASSHACQAASPPVPAAASTPKILHPLTRNYGKPWLANSKMSTPCKAAE
CPDFPVSSAEGTPIQGSKLRLPGYLSGKGFHSGEDSALITTAAARVRTQFAESRKTPSRP
GSRAGSKAGSRASSRRGSDASDFDISEIQSVCSDVETVPQTHRPVPRAGSRPSTAKPSKI
PTPQRRSPASKLDKSSKR*
MSMv4 transcript
EELWPWLTETQRIISQLPAPALEYETLRRQQEEHRQLRELIAEHKPHIDKMNKTGPQLLE
LSPKEGIYIQEKYVAADTLYSQIKEDVKKRAVVLDEAISQSTQFHDKIDQILESLERIAE
RLRQPPSISAEVEKIKEQIGENKSVSVDMEKLQPLYETLRQRGEEMIARSEGTEKDVSAK
AVQDKLDQMVFIWGSIHTLVEEREAKLLDVMELAEKFWCDHMSLVVTIKDTQDFIRDLED
PGIDPSVVKQQQEAAEAIREEIDGLQEELDMVITLGSELIAACGEPDKPIVKKSIDELNS
AWDSLNKAWKDRVDRLEEAMQAAVQYQDGLQGIFDWVDIAGNKLATMSPIGTDLETVKQQ
IEELKQFKSEAYQQQIEMERLNHQAELLLKKVTEEADKHTVQDPLMELKLIWDSLDERIV
SRQHKLEGALLALGQFQHALDELLAWLTHTKGLLSEQKPVGGDPKAIEIELAKHHVLQND
VLAHQSTVEAVNKAGNDLIESSEGEEASNLQYKLRILNQRWQDILEKTDQRKQQLDSALR
QAKGFHGEIEDLQQWLTDTERHLLASKPLGGLPETAKEQLNAHMEVCTAFAIKEETYKSL
MLRGQQMLARCPRSAETNIDQDITNLKEKWESVKSKLNEKKTKLEEALHLAMNFHNSLQD
FINWLTQAEQTLNVASRPSLILDTILFQIDEHKVFANEVNSHREQIIELDKTGTHLKYFS
QKQDVVLIKNLLISVQSRWEKVVQRLVERGRSLDEARKRAKQFHEAWSKLMEWLEESEKS
LDSELEIANDPDKIKAQLVQHKEFQKSLGGKHSVYDTTNRTGRSLKEKTSLADDNLKLDN
MLSELRDKWDTICGKSVERQNKLEEALLFSGQFTDALQALIDWLYRVEPQLAEDQPVHGD
IDLVMNLIDNHKVFQKELGKRTSSVQALKRSARELIEGSRDDSSWVRVQMQELSTRWETV
CALSISKQTRLESALQQAEEFHSVVHTLLEWLAEAEQTLRFHGALPDDEDALRTLIEQHK
EFMKRLEEKRAELSKATGMGDALLAVCHPDSITTIKHWITIIQARFEEVLAWAKQHQQRL
AGALAGLIAKQELLETLLAWLQWAETTLTEKDKEVIPQEIEEVKTLIAEHQTFMEEMTRK
QPDVDKVTKTYKRRATDPPSLQSHIPVLDKGRAGRKRFPASGFYPSGSQTQIETKNPRVN
LLVSKWQQVWLLALERRRKLNDALDRLEELREFANFDFDIWRKKYMRWMNHKKSRVMDFF
RRIDKDQDGKITRQEFIDGILSSKFPTSRLEMSAVADIFDRDGDGYIDYYEFVAALHPNK
DAYKPITDADKIEDEVTRQVAKCKCAKRFQVEQIGDNKYRFFLGNQFGDSQQLRLVRILR
STVMVRVGGGWMALDEFLVKNDPCRAKGRTNMELREKFILADGASQGMAAFRPRGRRSRP
SSRGASPNRSTSASSHACQAASPPVPAATSTPKILHPLTRNYGKPWLANSKMSTPCKAAE
CPDFPVSSAEGTPIQGSKLRLPGYLSGKGFHSGEDSALITTAAARVRTQFAESRKTPSRP
GSRAGSKAGSRASSRRGSDASDFDISEIQSVCSDVETVPQTHRPVPRAGSRPSTAKPSKI
PTPQRRSPASKLDKSSKR*
homology99.88 (1639 / 1639)

Exon Detail Report

Target Strain  MSMv4  JF1v3  KJRv1  SWNv1  CHDv1  NJLv1  BLG2v1  HMIv1  BFMv1  PGN2v1
Gene Symbol (Gene ID) Dst (ENSMUSG00000026131)
Transcript ID ENSMUST00000182018
No. Exon / Intron Start End Start Phase End Phase Length Sequence
5' upstream sequence
..........ACACATCTGAGCTATTAAAGTTTCCTTAACTGACCCAGGTTGAACATTTA
ACCAATTCAGTCAGTATCAACTGTAGTGTTGTTACGATGGCATGCCGGCTCATGTCAGTT
ACAAGGTATGTCATCTATGGGTCATAGGCTCCCAGAACATTTGTAACTTTTAAGCTGAAA
CTAAACCCAAAATACATAGATCTTCATTCTGTGTGAAGTTACTCACTGGAAGCCAGTAAG
GGAACAGTGAGCTAAGTAGCTAAGGAAACAGTAGGTATATGTAGTTTTAATAATTCTGCA
GACTGATAGAAAACCATCCACAGGTAATAGTAGTTAGCTCCACTTCTATACAGACATCTT
GGGGAGCTTAAAGAAATGACTGCATGCTAATTCTTATGGTAAATACAGGCCCCAAATAAA
GATATATAAATATCCATACCTCAAATTACATTTTAGATAAAATACATTCTCTTTCAGGCA
GAGCATGCATAAAATTATAAATTATCCGTACCTACTTTGATTTTGTGCAATTAATTTTAT
GTTAAATTGATTTTTTTTATGACTCCATTTGTGAAAGATAATCTTTCTTTTTCCTTAGAT
CATCGTGTAACTGTTGGTAGACTTGTGTGAAACTTACTTTCTAAACCTGAGAACATTGTA
AGAGTACTAGAGAGTTCTGCTTCTTGTATCTTAGTGCCTGCACGTAAAAATCAGAGTGCT
CTCTCTTATTAACATGAAAGTGTGCATAGAGACAGTTAATCTGAACAGATTTCGTTCATT
TATTTATTCATTTCACATACACCTGCCCTCCCTGTGCCAAACGTACAGAACTGGTCAAAA
CATACTAAGCCACAGCTGCCGTCCTGACAAGCGTGTTTCCTCGTCTTGCTTTCTAGAAAA
AGCTGGACAAGGTACTGAAGAAGTACGATGCCGTCTGCCAGATCAACTCAGAGAGGCACC
TGCAGCTGGAGCGGGCACAGTCCCTCGTTAGCCAGTTCTGGGAGACCTAT
1 EXON 1 34,257,836 34,257,940 - 0 105
GAGGAACTTTGGCCCTGGCTAACGGAAACACAACGAATCATCTCTCAGCTGCCTGCCCCA
GCCCTGGAGTACGAGACTCTGAGGAGACAGCAAGAGGAGCACCGG
INTRON 1 - 2 34,257,941 34,260,163 2,223
GTGAGAACGGGAGGCTGAGCCCTAG..........TGAGAGACTGTTTGGCTCATTACAG
2 EXON 2 34,260,164 34,260,367 0 0 204
CAACTTCGAGAACTGATAGCCGAGCACAAGCCACACATAGATAAGATGAACAAGACTGGT
CCACAGCTATTGGAACTGAGCCCAAAGGAAGGCATTTATATCCAAGAAAAGTATGTGGCA
GCCGACACCCTCTACAGTCAAATTAAAGAAGATGTCAAAAAGCGAGCTGTGGTTCTCGAC
GAGGCCATTTCTCAGTCCACCCAG
INTRON 2 - 3 34,260,368 34,262,019 1,652
GTAATCCTCTCCACACCAGGAAAAG..........AACAGCCCATCGTTTCTACTCGCAG
3 EXON 3 34,262,020 34,262,251 0 1 232
TTTCATGACAAGATCGACCAGATCCTTGAGAGCCTGGAACGCATTGCGGAGCGTCTGCGG
CAGCCGCCATCCATCTCCGCCGAGGTGGAGAAGATCAAGGAGCAGATTGGTGAAAATAAG
AGCGTGTCCGTGGACATGGAGAAGCTGCAGCCGCTATACGAGACTCTGAGGCAGAGGGGA
GAGGAGATGATCGCCAGATCCGAGGGCACTGAAAAAGACGTATCAGCCAAAG
INTRON 3 - 4 34,262,252 34,263,263 1,012
GTGACAAGATGGGCTCAGCTTGCTT..........TCACTGACGCTGTTTTGCTGTGTAG
4 EXON 4 34,263,264 34,263,490 1 0 227
CTGTACAGGATAAGTTGGACCAAATGGTTTTCATCTGGGGAAGCATCCACACGCTGGTCG
AAGAACGGGAAGCCAAACTGCTGGATGTGATGGAGCTAGCGGAGAAATTCTGGTGCGATC
ACATGTCGCTGGTCGTTACCATCAAAGACACTCAGGATTTCATCCGGGACCTGGAGGATC
CCGGAATCGACCCCTCGGTCGTAAAGCAGCAGCAGGAAGCTGCAGAG
INTRON 4 - 5 34,263,491 34,264,524 1,034
GTAAGTAACAGACCTGGGTGAACTA..........TCTGAGCCTCTGCTTTGGATTCCAG
5 EXON 5 34,264,525 34,264,647 0 0 123
GCAATCAGAGAGGAGATCGACGGCCTGCAGGAGGAGCTGGACATGGTCATCACGCTAGGC
TCAGAGCTCATCGCTGCATGTGGGGAGCCTGACAAACCCATTGTCAAGAAGAGCATTGAC
GAG
INTRON 5 - 6 34,264,648 34,264,749 102
GTACCCGAGGCTCGTTTGTGACTTA..........AAGGACTTTAACATTTGTTTCGTAG
6 EXON 6 34,264,750 34,264,851 0 0 102
CTAAATTCAGCATGGGATTCTCTAAATAAAGCTTGGAAGGACCGGGTGGACAGACTGGAA
GAGGCCATGCAAGCTGCCGTTCAGTACCAGGACGGATTGCAG
INTRON 6 - 7 34,264,852 34,266,856 2,005
GTGAGGTGGCCGCCGTGTCCTCTGG..........AACACATGGAAAATGTGTCTTGCAG
7 EXON 7 34,266,857 34,266,958 0 0 102
GGAATATTCGACTGGGTTGACATCGCAGGCAACAAGTTAGCCACAATGTCTCCCATTGGA
ACAGACCTGGAGACCGTCAAACAGCAGATTGAAGAGCTGAAG
INTRON 7 - 8 34,266,959 34,268,228 1,270
GTAGGTGTGGAGCTCCCAGCTGGTA..........TGTTTTGTTTTTTGTTTTTCCGCAG
8 EXON 8 34,268,229 34,268,402 0 0 174
CAATTTAAGTCAGAAGCTTATCAACAACAGATAGAAATGGAAAGGCTGAACCATCAAGCA
GAACTGTTGCTGAAGAAAGTAACAGAGGAGGCAGACAAGCACACAGTCCAGGACCCGCTG
ATGGAGCTGAAGTTGATCTGGGACAGCCTGGACGAGCGAATTGTCAGCAGACAG
INTRON 8 - 9 34,268,403 34,268,734 332
GTAAACACTGAGACCTGTGTGCATG..........ATTTTTCTTCTCTGTTTCTTGGCAG
9 EXON 9 34,268,735 34,268,890 0 0 156
CACAAGCTCGAGGGTGCTCTCTTAGCACTGGGTCAGTTCCAGCACGCCCTGGACGAGCTC
CTCGCATGGCTGACACACACCAAGGGCTTGCTAAGTGAACAGAAACCCGTTGGAGGAGAC
CCGAAAGCCATTGAGATTGAACTGGCTAAGCATCAC
INTRON 9 - 10 34,268,891 34,270,827 1,937
GTACGTACCACTGCTGCCCGTCACC..........TGAATGATCACGCTAACATTTTCAG
10 EXON 10 34,270,828 34,271,025 0 0 198
GTGCTCCAAAACGACGTCTTAGCCCACCAGTCCACGGTAGAAGCCGTCAACAAAGCAGGA
AATGATCTCATAGAGTCGAGTGAAGGCGAAGAAGCAAGCAACCTCCAGTACAAGCTCAGA
ATTCTCAATCAGCGCTGGCAGGATATTTTGGAAAAGACAGATCAAAGAAAGCAGCAGCTG
GACAGCGCCTTGCGCCAG
INTRON 10 - 11 34,271,026 34,271,354 329
GTGACTAGAGAGGCGGAGAGAGTCC..........ACTTAAAAACCACCTGTCACTGCAG
11 EXON 11 34,271,355 34,271,483 0 0 129
GCCAAAGGGTTCCACGGTGAAATCGAAGATTTGCAACAGTGGCTGACGGACACAGAGCGT
CATCTCTTGGCATCTAAACCTCTGGGAGGTCTCCCAGAGACAGCCAAGGAGCAGCTTAAC
GCACATATG
INTRON 11 - 12 34,271,484 34,274,167 2,684
GTACGTATGGTATTTTCTACAGCCC..........ACATGAGGGCGGTCTCGTTTCTTAG
12 EXON 12 34,274,168 34,274,338 0 0 171
GAAGTCTGCACCGCCTTTGCCATCAAGGAAGAGACGTACAAGAGCCTGATGCTGAGGGGG
CAGCAGATGCTTGCAAGGTGTCCCCGATCTGCGGAGACCAACATTGACCAAGACATCACC
AACCTGAAAGAGAAGTGGGAATCCGTGAAGAGCAAACTCAACGAGAAGAAA
INTRON 12 - 13 34,274,339 34,275,204 866
GTGAGTGCTTTGATCAGCATGACAG..........CACACTGAGTCCTCTTCCTTTACAG
13 EXON 13 34,275,205 34,275,360 0 0 156
ACAAAGTTGGAGGAGGCCCTGCACTTGGCCATGAACTTCCACAACTCCCTCCAGGACTTC
ATCAACTGGCTTACCCAGGCAGAGCAAACTCTGAACGTGGCTTCTCGGCCAAGTCTTATC
TTGGACACCATCTTGTTTCAAATTGATGAGCACAAG
INTRON 13 - 14 34,275,361 34,275,672 312
GTACGTCAGAACGCTTTGGAAAGCC..........TTGCATTCTCTTCTGTTGGAGAAAG
14 EXON 14 34,275,673 34,275,879 0 0 207
GTCTTTGCGAACGAAGTGAATTCTCACCGAGAGCAGATAATAGAGTTGGACAAGACTGGA
ACCCACCTGAAGTATTTCAGTCAGAAACAAGATGTCGTGCTCATCAAGAACCTGCTCATC
AGCGTGCAGAGTCGGTGGGAAAAGGTGGTGCAGCGCCTGGTAGAGAGAGGGAGATCCCTG
GACGAAGCCAGGAAGAGGGCCAAGCAG
INTRON 14 - 15 34,275,880 34,278,019 2,140
GTAACAAACTCGGCTGCGGTTCCCC..........GGGTAAATATGGGTCTCTTTAACAG
15 EXON 15 34,278,020 34,278,139 0 0 120
TTCCATGAAGCTTGGAGCAAGCTGATGGAATGGCTGGAAGAGTCAGAAAAATCTCTGGAT
TCTGAGCTGGAAATCGCCAACGATCCAGACAAAATCAAAGCCCAGCTGGTCCAGCACAAG
INTRON 15 - 16 34,278,140 34,282,422 4,283
GTGAGCTCCACATGGACAAAGCACG..........AGCTCTTTCCTTGTTAAACACGTAG
16 EXON 16 34,282,423 34,282,592 0 2 170
GAGTTTCAGAAATCACTCGGAGGCAAACATTCTGTCTACGATACCACCAACCGAACTGGA
CGTTCTCTGAAGGAGAAAACCTCCCTGGCAGATGACAACCTGAAGCTGGACAACATGCTG
AGTGAACTTAGGGACAAATGGGACACCATCTGTGGAAAGTCTGTGGAAAG
INTRON 16 - 17 34,282,593 34,284,258 1,666
GTAGGATGTCCGCGCATTGGTGTCT..........ATTCATCTCCTTTTTTTCCCCCCAG
17 EXON 17 34,284,259 34,284,418 2 0 160
ACAAAACAAATTGGAGGAAGCTCTGTTATTTTCTGGACAGTTCACAGATGCCCTGCAGGC
CCTCATTGATTGGCTGTATCGAGTTGAGCCCCAGCTGGCAGAAGACCAGCCTGTCCACGG
GGACATTGACTTGGTGATGAACCTGATCGATAATCACAAG
INTRON 17 - 18 34,284,419 34,287,186 2,768
GTATAGCCACCCAGAACGTCCTTTT..........ATGAAGGTCAGTATGGTTTCCCCAG
18 EXON 18 34,287,187 34,287,381 0 0 195
GTCTTCCAGAAAGAGCTGGGGAAGAGGACCAGCAGCGTGCAGGCCCTGAAGCGCTCTGCC
AGGGAACTCATCGAAGGCAGCCGAGACGACTCCTCCTGGGTCAGGGTCCAGATGCAGGAG
CTAAGCACCCGCTGGGAGACCGTGTGTGCACTCTCCATATCAAAGCAGACGCGGCTAGAG
TCAGCCCTGCAACAG
INTRON 18 - 19 34,287,382 34,287,890 509
GTAAAGTCCACATTACTGAGAGCTC..........TTTCTGCGTGTGTGCTAACTGTTAG
19 EXON 19 34,287,891 34,288,019 0 0 129
GCAGAGGAATTCCACTCTGTGGTCCACACCCTCTTGGAGTGGCTGGCAGAAGCAGAGCAA
ACCCTGCGTTTCCATGGTGCTCTCCCAGATGATGAGGATGCTCTCCGGACTCTCATTGAG
CAACATAAA
INTRON 19 - 20 34,288,020 34,289,523 1,504
GTGAGTAACTTCCAGTACAAAACGG..........GAAGTGTCTGCTCTGCCCGCTGCAG
20 EXON 20 34,289,524 34,289,667 0 0 144
GAGTTCATGAAGAGACTGGAAGAGAAAAGGGCAGAACTAAGTAAGGCCACCGGTATGGGG
GACGCTCTTCTGGCCGTCTGCCACCCTGACTCCATTACCACCATTAAGCACTGGATCACG
ATCATCCAGGCCAGGTTTGAAGAG
INTRON 20 - 21 34,289,668 34,290,358 691
GTCAGTGCGTCTGACGTCATCTGGG..........AGCGAGCTGTGTGTCCGTGCAACAG
21 EXON 21 34,290,359 34,290,547 0 0 189
GTGCTGGCCTGGGCGAAGCAGCACCAGCAGAGGTTAGCAGGGGCGCTGGCTGGGCTCATC
GCCAAGCAGGAGCTGCTGGAGACTCTGCTGGCATGGCTACAGTGGGCAGAAACCACACTG
ACCGAGAAAGATAAGGAAGTTATCCCCCAGGAGATCGAAGAGGTGAAAACCCTCATTGCA
GAACACCAG
INTRON 21 - 22 34,290,548 34,291,786 1,239
GTAAAGAAACTCAATCCATCCCCTC..........TAATTGACACCGTTTTCCCTTTCAG
22 EXON 22 34,291,787 34,291,916 0 1 130
ACCTTCATGGAAGAAATGACCAGAAAACAGCCCGACGTTGATAAAGTTACCAAGACCTAT
AAGAGGAGGGCCACTGACCCTCCCTCATTACAGTCTCACATCCCCGTCTTGGACAAGGGA
CGAGCCGGAA
INTRON 22 - 23 34,291,917 34,293,319 1,403
GTAAGCTGGGGGCAGGTTATTTAAA..........CTGACCTGCAGTTGTGTTTTACCAG
23 EXON 23 34,293,320 34,293,483 1 0 164
GGAAACGCTTCCCAGCCTCGGGCTTCTATCCATCTGGCTCACAGACGCAAATCGAGACCA
AGAACCCCAGGGTTAACCTGCTGGTGAGCAAGTGGCAGCAGGTCTGGCTCCTGGCCTTGG
AAAGGAGGAGGAAGCTCAACGACGCCCTGGACAGGCTGGAGGAG
INTRON 23 - 24 34,293,484 34,294,383 900
GTCAGAAACTCCCGCTCTGTCCCTG..........CAGCCAAAACTTTCGCTTTTTCTAG
24 EXON 24 34,294,384 34,294,546 0 1 163
CTGAGGGAATTTGCCAACTTCGATTTCGACATCTGGCGGAAAAAATACATGAGGTGGATG
AACCATAAGAAATCGAGAGTGATGGATTTCTTCCGGAGAATTGATAAGGACCAGGATGGG
AAGATCACTCGGCAGGAATTCATCGACGGGATTCTCTCCTCCA
INTRON 24 - 25 34,294,547 34,295,153 607
GTAAGTGCCGAGACGTGCAATAGCC..........ACTAGCACCGCTTGGTACATTGCAG
25 EXON 25 34,295,154 34,295,308 1 0 155
AGTTTCCTACCAGTCGCCTGGAGATGAGCGCCGTGGCAGACATCTTTGACAGAGATGGTG
ATGGGTACATTGACTACTATGAATTCGTGGCCGCTCTGCATCCAAACAAAGATGCGTACA
AACCCATCACGGATGCTGACAAAATTGAGGACGAG
INTRON 25 - 26 34,295,309 34,295,461 153
GTACTCACTGTTGGCCTTCTGCTGC..........AATGTCATACCTTTGTCTTTGACAG
26 EXON 26 34,295,462 34,295,536 0 0 75
GTCACGAGGCAGGTAGCCAAGTGTAAGTGTGCCAAGCGATTCCAAGTTGAACAGATTGGT
GATAACAAATACAGG
INTRON 26 - 27 34,295,537 34,296,741 1,205
GTGAGTGTCTCAGTTGACTCCTGCC..........CTTGCATTTTTCATTGTTTTATCAG
27 EXON 27 34,296,742 34,296,759 0 0 18
TTCTTCCTGGGAAATCAG
INTRON 27 - 28 34,296,760 34,299,720 2,961
GTATAAACCAGTGGACTCTCAAGTT..........GGTCCTTTCTCTCTCTGCTGCCTAG
28 EXON 28 34,299,721 34,299,838 0 1 118
TTTGGAGACTCCCAGCAGCTGCGACTGGTTCGGATCCTGCGAAGCACGGTGATGGTTCGT
GTTGGAGGCGGATGGATGGCTCTGGATGAGTTCTTAGTGAAAAATGATCCCTGCAGGG
INTRON 28 - 29 34,299,839 34,302,829 2,991
GTAAGGAGACCCTTTTGTCGAGCTG..........CTTTTGCCGCCTGCGTGCAATCCAG
29 EXON 29 34,302,830 34,303,032 1 0 203
CTAAAGGAAGGACCAACATGGAGCTGCGGGAAAAGTTCATCCTAGCAGACGGTGCCAGCC
AGGGTATGGCCGCCTTCCGACCGCGAGGCCGCCGATCTCGCCCTTCATCCAGAGGAGCTT
CCCCCAACAGATCCACTTCCGCGTCGAGTCATGCCTGCCAGGCAGCCTCCCCACCGGTGC
CTGCTGCCACCAGCACACCCAAG
INTRON 29 - 30 34,303,033 34,303,420 388
GTAGGACTCCAGGCTGTGGCCCTCT..........TTTGATGTACCGTTGTTCCATGCAG
30 EXON 30 34,303,421 34,303,531 0 0 111
ATTCTCCATCCTTTAACACGCAATTATGGTAAACCATGGTTGGCAAACAGCAAAATGTCA
ACTCCCTGTAAAGCAGCAGAATGCCCCGACTTTCCCGTGTCATCCGCAGAG
INTRON 30 - 31 34,303,532 34,306,527 2,996
GTATCGTAAGGCCCCAGACTGCAGT..........CTCTCTGCACTGGTCGCACACACAG
31 EXON 31 34,306,528 34,306,651 0 1 124
GGCACACCAATCCAGGGAAGCAAGCTGCGACTACCCGGGTACCTGTCAGGGAAAGGCTTC
CACTCCGGGGAGGACAGCGCCTTGATAACGACGGCAGCTGCCAGAGTCCGAACACAGTTC
GCTG
INTRON 31 - 32 34,306,652 34,307,329 678
GTGAGTATATGATATCTCTTTCCCT..........TCTGTCCTCTGTCCTCTCTCTCCAG
32 EXON 32 34,307,330 34,308,404 1 - 1,075
AGTCCAGGAAGACTCCCAGCCGCCCAGGGAGCAGAGCCGGAAGCAAAGCCGGAAGCAGAG
CCAGCAGCCGCCGAGGCAGCGATGCGTCCGACTTTGACATTTCAGAAATCCAGTCTGTGT
GCTCAGACGTGGAGACCGTCCCACAGACACACAGACCTGTGCCCCGAGCAGGTTCTCGGC
CATCCACAGCCAAGCCTTCTAAAATCCCCACACCCCAGAGGAGGTCACCTGCCAGCAAAT
TAGACAAGTCTTCGAAGAGATAGTGCAATTGGCTCCAACCAGCCCTTCCCCGAGCATTTA
CTATTTAAGCGAATGATGTAAAATACGATGTAGAAATTACTGTGAAATATTGCAGGAGGC
AAGTTTTAAATTCTGCAGATGGCCTTATTTGTGTATTTGTCTTTTTATTTGATCTGTATC
ACTTTTTTGGTCAGATTTTCTGGGGGTAAAAGTCACATCATATGTGATAAGGAAGAAAGA
ACTTAACATGAACTGATGTTTCTGCACTGTCGAGTGTAGACCATACACTAAAAGTCAGTT
ACTGTACCTACAGGTAAGTCCACATTCTCTCTGACAACCACAGCACTACATAGCTGACAT
TAAGGGATACCTCATGACACCTTTTATGGAGATTCTGAACAGCTGACAAACCAAGCAGGG
AATTGTATTTTTATTTATTTTTTATTTTTATTTTTTGCGATGCTCTAACTGTAAATTAGA
CAGAAGACAAAAGGAAAAACACAACAAGACGCAGTTCTTCGAGCAGCCTCCAAGAGAGAA
TCAGAGTCACAGGAAAACGCCTCAAGCAGCCGCCAGTACCATGGCGTTCACGCACCTCCC
AGTGTCCTTGTGCCTCTGCTTCAGGCGCAGCCAGACGCGCCCTGGGCATCCGCCGTCTCT
ACCATAGGGATGCGGTGCTCCGTGCATCCGTGTACACGTGCAAGGTTTTGCTCTGCTTGG
GTGGACAGCAGCCCCTGTACCACTGAACTCATTTTGTAACAGCAATTTCGCTTGCAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAGCTCTGAAATAAAACACATCCCTTAACTA
3' upstream sequence
CATCGCTATGGAATTAATTTTTTTTCCCCAGGGAAAACTGGTGTATTTTTTTATGAACAG
TATCAATTTGGAGTGACCAAAAGATACTTGAAAAAAAAAGTGGGCTTATTTTGATTTCTC
ATCTGGAATAATCATGTTCTGGTATTATATCTACTTATATTTAATAAATATGCATTTTAA
TTTATTATGTATACTCACATACTAGAGAAAGATATTAGTATGCATTTAATAAAACATATT
CACTTGAACGTATGGAATACTTGGTTATTTGAAATGAGCTTTTCTGTTTGTTTTAAATAA
AGGGTAAATAATAGAAATGGTAATAATAGATGATAGTCTGACAGGAAAGGCTGGAAGGTG
TGTAAGGAGGTAGAGCTAATGGGAAGCACCCATTCTATAAGTATTTAAGAAATCCTAGCT
GGTATCAATGACATTTAGGCTACTACAGTGCTCCTGTCCTCAAATAATCAAGGGAGATGT
CTTAGGGTTTTACTGCTGTGAAGAGACACCTTGACCAAGGCAACTCTTATAAGGACAACA
TTTAATTGGAGCTGGCTTACAGGTTCAGAAGTTCAGTCCATCATCATCAAGGTGGGAACA
GGGCAGCATCCAGGCGGGCATGGTGCAGGAGGAGCTGAGAGTTCTACAGCTTCATCTGAA
GGCTGCTAGAAGTCTGGCTTCCAGGCAACTAGGATGAGGATCTTAAAGCCCACACCCATA
GTGCAACGCCTACTCCAACAAGGCCATACCTTCTAATGGTGCCACTCCCTAGCCCAAGCA
CACAGAAACCATCCCAAGAGACTTCATTATGAATCACAAAAAAAGCATCAACAGGGCAGG
ATATTTAACAAGATGACGACTTTATTGTTAATATTGTGATACTCTAATATAATTTTTGTT
TTTTTGTTTTGGGGGGGAGGTTGGTCTTGGCATTGGTTTTCTGGTTTGTTTGTTTCTTTG
TTTTATCAAGTTATACAGTTTTCCTAAATAAGAAAATAGC..........

Sequence Detail Report

Gene Symbol (Gene ID) Dst (ENSMUSG00000026131)
Transcript ID ENSMUST00000182018
SNP Information
Strain :
Sequence Retrieve :
Exon translate :
CDS Start ( 1 ) - End ( 1639 )
-
Strand : forward reverse
Show sequence : nucleotide amino acid
Color information