MoG+ -Mouse Genome database with high added value-

Target CDS Information

Gene Symbol (Gene ID)

Map4k4 (ENSMUSG00000026074)

Cross Reference

EMBL	AC132909, AC166238
GO	GO:0000165, GO:0004111, GO:0004674, ...show all
goslim_goa	GO:0000902, GO:0003674, GO:0005575, ...show all
MGI_trans_name	Map4k4-016
OTTP	OTTMUSP00000068926
OTTT	OTTMUST00000127974
UniParc	UPI00053BD679
Uniprot/SPTREMBL	A0A0A6YVZ8
Vega_transcript	Map4k4-016, OTTMUST00000127974
Vega_translation	179106, OTTMUSP00000068926

Definition

protein_id:ENSMUSP00000141332
translation:

MANDSPAKSLVDIDLSSLRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE
DEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDDQLWLVMEFCGAGSITDLVKNT
KGNTLKEDWIAYISREILRGLAHLHIHHVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDR
TVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDLWSCGITAIEMAEGAPPLCDMHPMR
ALFLIPRNPPPRLKSKKWSKKFFSFIEGCLVKNYMQRPSTEQLLKHPFIRDQPNERQVRI
QLKDHIDRTRKKRGEKDETEYEYSGSEEEEEEVPEQEGEPSSIVNVPGESTLRRDFLRLQ
QENKERSEALRRQQLLQEQQLREQEEYKRQLLAERQKRIEQQKE

Chromosome

1

Length
Position(start - end)

89047
39901230 - 39990278

Orient to Chromosome

plus

Link

Location : (1:39901230-39990278)
/

Detail Map

name	Map4k4 (ENSMUSG00000026074)
type	gene
link	VEGA Ensembl MGI
xref
definition	locus_tag : Map4k4 note : mitogen-activated protein kinase kinase kinase kinase 4 [Source:MGI Symbol;Acc:MGI:1349394]

name	Map4k4 (ENSMUSG00000026074)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000168431

name	Map4k4 (ENSMUSG00000026074)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000163854

name	Map4k4 (ENSMUSG00000026074)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000191761

name	Map4k4 (ENSMUSG00000026074)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000193682

name	Map4k4 (ENSMUSG00000026074)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000195860

name	Map4k4 (ENSMUSG00000026074)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000195259

name	Map4k4 (ENSMUSG00000026074)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000195636

name	Map4k4 (ENSMUSG00000026074)
type	mRNA
link	VEGA Ensembl MGI
xref
definition	note : transcript_id=ENSMUST00000192509

name	Map4k4 (ENSMUSG00000026074) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	RefSeq_mRNA_predicted:XM_006496044.1 RefSeq_peptide_predicted:XP_006496107.1 Vega_transcript:Map4k4-019 Vega_transcript:OTTMUST00000127982 Uniprot/SPTREMBL:F8VPL5 UCSC:uc011wjx.1 EMBL:AC132909 EMBL:AC166238 GO:GO:0000165 GO:GO:0004111 GO:GO:0004674 GO:GO:0005524 GO:GO:0005737 GO:GO:0006468 GO:GO:0007346 GO:GO:0031098 GO:GO:0032147 GO:GO:0035556 GO:GO:0042981 GO:GO:0043066 GO:GO:0046328 GO:GO:0048812 MGI_trans_name:Map4k4-019 Vega_translation:179105 Vega_translation:OTTMUSP00000068932 goslim_goa:GO:0000902 goslim_goa:GO:0003674 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005737 goslim_goa:GO:0006464 goslim_goa:GO:0006950 goslim_goa:GO:0007165 goslim_goa:GO:0008150 goslim_goa:GO:0016301 goslim_goa:GO:0030154 goslim_goa:GO:0043167 goslim_goa:GO:0048856 OTTP:OTTMUSP00000068932 OTTT:OTTMUST00000127982 UniParc:UPI0003D76264
definition	note : transcript_id=ENSMUST00000168431 protein_id : ENSMUSP00000129796 translation : MANDSPAKSLVDIDLSSLRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDDQLWLVMEFCGAGSITDLVKNTKGNTLKEDWIAYISREILRGLAHLHIHHVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDLWSCGITAIEMAEGAPPLCDMHPMRALFLIPRNPPPRLKSKKWSKKFFSFIEGCLVKNYMQRPSTEQLLKHPFIRDQPNERQVRIQLKDHIDRTRKKRGEKDETEYEYSGSEEEEEEVPEQEGEPSSIVNVPGESTLRRDFLRLQQENKERSEALRRQQLLQEQQLREQEEYKRQLLAERQKRIEQQKEQRRRLEEQQRREREARRQQEREQRRREQEEKRRLEELERRRKEEEERRRAEEEKRRVEREQEYIRRQLEEEQRHLEILQQQLLQEQAMLLECRWREMEEHRQAERLQRQLQQEQAYLLSLQHDHRRPHAQQQPPPPQQQDRSKPSFHAPEPKPHYDPADRAREVEDRFRKTNHSSPEAQAKQTGRGLEPPVPSRSESFSNGNSESVHPALQRPAEPQVPVRTTSRSPVLSRRDSPLQGGGQQNSQAGQRNSTSIEPRLLWERVEKLVPRPGSGSSSGSSNSGSQPGSHPGSQSGSGERFRVRSSSKSEGSPSPRQESAAKKPDDKKEVFRPLKPADLTALAKELRAVEDVRPPHKVTDYSSSSEESGTTDEEEEDVEQEGADDSTSGPEDTRAASSPNLSNGETESVKTMIVHDDVESEPAMTPSKEGTLIVRQTQSASSTLQKHKSSSSFTPFIDPRLLQISPSSGTTVTSVVGFSCDGLRPEAIRQDPTRKGSVVNVNPTNTRPQSDTPEIRKYKKRFNSEILCAALWGVNLLVGTESGLMLLDRSGQGKVYPLISRRRFQQMDVLEGLNVLVTISGKKDKLRVYYLSWLRNKILHNDPEVEKKQGWTTVGDLEGCVHYKVVKYERIKFLVIALKSSVEVYAWAPKPYHKFMAFKSFGELLHKPLLVDLTVEEGQRLKVIYGSCAGFHAVDVDSGSVYDIYLPTHIQCSIKPHAIIILPNTDGMELLVCYEDEGVYVNTYGRITKDVVLQWGEMPTSVAYIRSNQTMGWGEKAIEIRSVETGHLDGVFMHKRAQRLKFLCERNDKVFFASVRSGGSSQVYFMTLGRTSLLSW

name	Map4k4 (ENSMUSG00000026074) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Uniprot/SPTREMBL:E9PVG7 UCSC:uc011wjv.1 EMBL:AC132909 EMBL:AC166238 GO:GO:0000165 GO:GO:0004111 GO:GO:0004674 GO:GO:0005524 GO:GO:0005737 GO:GO:0006468 GO:GO:0007346 GO:GO:0031098 GO:GO:0032147 GO:GO:0035556 GO:GO:0042981 GO:GO:0043066 GO:GO:0046328 GO:GO:0048812 MGI_trans_name:Map4k4-201 goslim_goa:GO:0000902 goslim_goa:GO:0003674 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005737 goslim_goa:GO:0006464 goslim_goa:GO:0006950 goslim_goa:GO:0007165 goslim_goa:GO:0008150 goslim_goa:GO:0016301 goslim_goa:GO:0030154 goslim_goa:GO:0043167 goslim_goa:GO:0048856 UniParc:UPI000274722F
definition	note : transcript_id=ENSMUST00000163854 protein_id : ENSMUSP00000126961 translation : MANDSPAKSLVDIDLSSLRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDDQLWLVMEFCGAGSITDLVKNTKGNTLKEDWIAYISREILRGLAHLHIHHVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDLWSCGITAIEMAEGAPPLCDMHPMRALFLIPRNPPPRLKSKKWSKKFFSFIEGCLVKNYMQRPSTEQLLKHPFIRDQPNERQVRIQLKDHIDRTRKKRGEKDETEYEYSGSEEEEEEVPEQEGEPSSIVNVPGESTLRRDFLRLQQENKERSEALRRQQLLQEQQLREQEEYKRQLLAERQKRIEQQKEQRRRLEEQQRREREARRQQEREQRRREQEEKRRLEELERRRKEEEERRRAEEEKRRVEREQEYIRRQLEEEQRHLEILQQQLLQEQAMLLHDHRRPHAQQQPPPPQQQDRSKPSFHAPEPKPHYDPADRAREVEDRFRKTNHSSPEAQAKQTGRGLEPPVPSRSESFSNGNSESVHPALQRPAEPQVQWSHLASLKNNVSPVSRSHSFSDPSPKFAHHHLRSQDPCPPSRSEGLSQSSDSKSEVPEPTQKAWSRSDSDEVPPRVPVRTTSRSPVLSRRDSPLQGGGQQNSQAGQRNSTSSIEPRLLWERVEKLVPRPGSGSSSGSSNSGSQPGSHPGSQSGSGERFRVRSSSKSEGSPSPRQESAAKKPDDKKEVFRPLKPAVSTDLTALAKELRAVEDVRPPHKVTDYSSSSEESGTTDEEEEDVEQEGADDSTSGPEDTRAASSPNLSNGETESVKTMIVHDDVESEPAMTPSKEGTLIVRQTQSASSTLQKHKSSSSFTPFIDPRLLQISPSSGTTVTSVVGFSCDGLRPEAIRQDPTRKGSVVNVNPTNTRPQSDTPEIRKYKKRFNSEILCAALWGVNLLVGTESGLMLLDRSGQGKVYPLISRRRFQQMDVLEGLNVLVTISGKKDKLRVYYLSWLRNKILHNDPEVEKKQGWTTVGDLEGCVHYKVVKYERIKFLVIALKSSVEVYAWAPKPYHKFMAFKSFGELLHKPLLVDLTVEEGQRLKVIYGSCAGFHAVDVDSGSVYDIYLPTHIQCSIKPHAIIILPNTDGMELLVCYEDEGVYVNTYGRITKDVVLQWGEMPTSVAYIRSNQTMGWGEKAIEIRSVETGHLDGVFMHKRAQRLKFLCERNDKVFFASVRSGGSSQVYFMTLGRTSLLSW

name	Map4k4 (ENSMUSG00000026074) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	Vega_transcript:Map4k4-016 Vega_transcript:OTTMUST00000127974 Uniprot/SPTREMBL:A0A0A6YVZ8 EMBL:AC132909 EMBL:AC166238 GO:GO:0000165 GO:GO:0004111 GO:GO:0004674 GO:GO:0005524 GO:GO:0005737 GO:GO:0006468 GO:GO:0007346 GO:GO:0031098 GO:GO:0032147 GO:GO:0035556 GO:GO:0042981 GO:GO:0043066 GO:GO:0046328 GO:GO:0048812 MGI_trans_name:Map4k4-016 Vega_translation:179106 Vega_translation:OTTMUSP00000068926 goslim_goa:GO:0000902 goslim_goa:GO:0003674 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005737 goslim_goa:GO:0006464 goslim_goa:GO:0006950 goslim_goa:GO:0007165 goslim_goa:GO:0008150 goslim_goa:GO:0016301 goslim_goa:GO:0030154 goslim_goa:GO:0043167 goslim_goa:GO:0048856 OTTP:OTTMUSP00000068926 OTTT:OTTMUST00000127974 UniParc:UPI00053BD679
definition	note : transcript_id=ENSMUST00000191761 protein_id : ENSMUSP00000141332 translation : MANDSPAKSLVDIDLSSLRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDDQLWLVMEFCGAGSITDLVKNTKGNTLKEDWIAYISREILRGLAHLHIHHVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDLWSCGITAIEMAEGAPPLCDMHPMRALFLIPRNPPPRLKSKKWSKKFFSFIEGCLVKNYMQRPSTEQLLKHPFIRDQPNERQVRIQLKDHIDRTRKKRGEKDETEYEYSGSEEEEEEVPEQEGEPSSIVNVPGESTLRRDFLRLQQENKERSEALRRQQLLQEQQLREQEEYKRQLLAERQKRIEQQKE

name	Map4k4 (ENSMUSG00000026074) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	RefSeq_peptide:NP_001239130 RefSeq_mRNA:NM_001252201.1 Vega_transcript:Map4k4-005 Vega_transcript:OTTMUST00000127975 Uniprot/SPTREMBL:B2RUE8 UCSC:uc011wjw.1 EMBL:AC132909 EMBL:AC166238 EMBL:BC141109 GO:GO:0000165 GO:GO:0004111 GO:GO:0004674 GO:GO:0005524 GO:GO:0005737 GO:GO:0006468 GO:GO:0007346 GO:GO:0031098 GO:GO:0032147 GO:GO:0035556 GO:GO:0042981 GO:GO:0043066 GO:GO:0046328 GO:GO:0048812 MGI_trans_name:Map4k4-005 Vega_translation:179107 Vega_translation:OTTMUSP00000068927 goslim_goa:GO:0000902 goslim_goa:GO:0003674 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005737 goslim_goa:GO:0006464 goslim_goa:GO:0006950 goslim_goa:GO:0007165 goslim_goa:GO:0008150 goslim_goa:GO:0016301 goslim_goa:GO:0030154 goslim_goa:GO:0043167 goslim_goa:GO:0048856 protein_id:AAI41110.1 OTTP:OTTMUSP00000068927 OTTT:OTTMUST00000127975 UniParc:UPI00017479F3
definition	note : transcript_id=ENSMUST00000193682 protein_id : ENSMUSP00000141862 translation : MANDSPAKSLVDIDLSSLRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDDQLWLVMEFCGAGSITDLVKNTKGNTLKEDWIAYISREILRGLAHLHIHHVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDLWSCGITAIEMAEGAPPLCDMHPMRALFLIPRNPPPRLKSKKWSKKFFSFIEGCLVKNYMQRPSTEQLLKHPFIRDQPNERQVRIQLKDHIDRTRKKRGEKDETEYEYSGSEEEEEEVPEQEGEPSSIVNVPGESTLRRDFLRLQQENKERSEALRRQQLLQEQQLREQEEYKRQLLAERQKRIEQQKEQRRRLEEQQRREREARRQQEREQRRREQEEKRRLEELERRRKEEEERRRAEEEKRRVEREQEYIRRQLEEEQRHLEILQQQLLQEQAMLLHDHRRPHAQQQPPPPQQQDRSKPSFHAPEPKPHYDPADRAREVPVRTTSRSPVLSRRDSPLQGGGQQNSQAGQRNSTSSIEPRLLWERVEKLVPRPGSGSSSGSSNSGSQPGSHPGSQSGSGERFRVRSSSKSEGSPSPRQESAAKKPDDKKEVFRPLKPAGEVDLTALAKELRAVEDVRPPHKVTDYSSSSEESGTTDEEEEDVEQEGADDSTSGPEDTRAASSPNLSNGETESVKTMIVHDDVESEPAMTPSKEGTLIVRQSTVDQKRASHHESNGFAGRIHLLPDLLQQSHSSSTSSTSSSPSSSQPTPTMSPQTPQDKLTANETQSASSTLQKHKSSSSFTPFIDPRLLQISPSSGTTVTSVVGFSCDGLRPEAIRQDPTRKGSVVNVNPTNTRPQSDTPEIRKYKKRFNSEILCAALWGVNLLVGTESGLMLLDRSGQGKVYPLISRRRFQQMDVLEGLNVLVTISGKKDKLRVYYLSWLRNKILHNDPEVEKKQGWTTVGDLEGCVHYKVVKYERIKFLVIALKSSVEVYAWAPKPYHKFMAFKSFGELLHKPLLVDLTVEEGQRLKVIYGSCAGFHAVDVDSGSVYDIYLPTHIQCSIKPHAIIILPNTDGMELLVCYEDEGVYVNTYGRITKDVVLQWGEMPTSVAYIRSNQTMGWGEKAIEIRSVETGHLDGVFMHKRAQRLKFLCERNDKVFFASVRSGGSSQVYFMTLGRTSLLSW

name	Map4k4 (ENSMUSG00000026074) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	RefSeq_peptide:NP_001239129 RefSeq_mRNA:NM_001252200.1 RefSeq_peptide_predicted:XP_011236832.1 Vega_transcript:Map4k4-004 Vega_transcript:OTTMUST00000127976 Uniprot/SPTREMBL:A0A0A6YW53 UCSC:uc011wjv.1 EMBL:AC132909 EMBL:AC166238 GO:GO:0000165 GO:GO:0004111 GO:GO:0004674 GO:GO:0005524 GO:GO:0005737 GO:GO:0006468 GO:GO:0007346 GO:GO:0031098 GO:GO:0032147 GO:GO:0035556 GO:GO:0042981 GO:GO:0043066 GO:GO:0046328 GO:GO:0048812 MGI_trans_name:Map4k4-004 Vega_translation:179108 Vega_translation:OTTMUSP00000068928 goslim_goa:GO:0000902 goslim_goa:GO:0003674 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005737 goslim_goa:GO:0006464 goslim_goa:GO:0006950 goslim_goa:GO:0007165 goslim_goa:GO:0008150 goslim_goa:GO:0016301 goslim_goa:GO:0030154 goslim_goa:GO:0043167 goslim_goa:GO:0048856 OTTP:OTTMUSP00000068928 OTTT:OTTMUST00000127976 UniParc:UPI0001F7959B
definition	note : transcript_id=ENSMUST00000195860 protein_id : ENSMUSP00000141400 translation : MANDSPAKSLVDIDLSSLRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDDQLWLVMEFCGAGSITDLVKNTKGNTLKEDWIAYISREILRGLAHLHIHHVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDLWSCGITAIEMAEGAPPLCDMHPMRALFLIPRNPPPRLKSKKWSKKFFSFIEGCLVKNYMQRPSTEQLLKHPFIRDQPNERQVRIQLKDHIDRTRKKRGEKDETEYEYSGSEEEEEEVPEQEGEPSSIVNVPGESTLRRDFLRLQQENKERSEALRRQQLLQEQQLREQEEYKRQLLAERQKRIEQQKEQRRRLEEQQRREREARRQQEREQRRREQEEKRRLEELERRRKEEEERRRAEEEKRRVEREQEYIRRQLEEEQRHLEILQQQLLQEQAMLLHDHRRPHAQQQPPPPQQQDRSKPSFHAPEPKPHYDPADRAREVEDRFRKTNHSSPEAQAKQTGRGLEPPVPSRSESFSNGNSESVHPALQRPAEPQVQWSHLASLKNNVSPVSRSHSFSDPSPKFAHHHLRSQDPCPPSRSEGLSQSSDSKSEVPEPTQKAWSRSDSDEVPPRVPVRTTSRSPVLSRRDSPLQGGGQQNSQAGQRNSTSSIEPRLLWERVEKLVPRPGSGSSSGSSNSGSQPGSHPGSQSGSGERFRVRSSSKSEGSPSPRQESAAKKPDDKKEVFRPLKPAGEVDLTALAKELRAVEDVRPPHKVTDYSSSSEESGTTDEEEEDVEQEGADDSTSGPEDTRAASSPNLSNGETESVKTMIVHDDVESEPAMTPSKEGTLIVRQTQSASSTLQKHKSSSSFTPFIDPRLLQISPSSGTTVTSVVGFSCDGLRPEAIRQDPTRKGSVVNVNPTNTRPQSDTPEIRKYKKRFNSEILCAALWGVNLLVGTESGLMLLDRSGQGKVYPLISRRRFQQMDVLEGLNVLVTISGKKDKLRVYYLSWLRNKILHNDPEVEKKQGWTTVGDLEGCVHYKVVKYERIKFLVIALKSSVEVYAWAPKPYHKFMAFKSFGELLHKPLLVDLTVEEGQRLKVIYGSCAGFHAVDVDSGSVYDIYLPTHIQCSIKPHAIIILPNTDGMELLVCYEDEGVYVNTYGRITKDVVLQWGEMPTSVAYIRSNQTMGWGEKAIEIRSVETGHLDGVFMHKRAQRLKFLCERNDKVFFASVRSGGSSQVYFMTLGRTSLLSW

name	Map4k4 (ENSMUSG00000026074) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	RefSeq_peptide:NP_001239131 RefSeq_mRNA:NM_001252202.1 RefSeq_peptide_predicted:XP_006496108.1 Vega_transcript:Map4k4-003 Vega_transcript:OTTMUST00000127977 Uniprot/SPTREMBL:B7ZNR9 UCSC:uc011wjx.1 EMBL:AC132909 EMBL:AC166238 EMBL:BC145391 GO:GO:0000165 GO:GO:0004111 GO:GO:0004674 GO:GO:0005524 GO:GO:0005737 GO:GO:0006468 GO:GO:0007346 GO:GO:0031098 GO:GO:0032147 GO:GO:0035556 GO:GO:0042981 GO:GO:0043066 GO:GO:0046328 GO:GO:0048812 MGI_trans_name:Map4k4-003 Vega_translation:179109 Vega_translation:OTTMUSP00000068929 goslim_goa:GO:0000902 goslim_goa:GO:0003674 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005737 goslim_goa:GO:0006464 goslim_goa:GO:0006950 goslim_goa:GO:0007165 goslim_goa:GO:0008150 goslim_goa:GO:0016301 goslim_goa:GO:0030154 goslim_goa:GO:0043167 goslim_goa:GO:0048856 protein_id:AAI45392.1 OTTP:OTTMUSP00000068929 OTTT:OTTMUST00000127977 UniParc:UPI000189A94C
definition	note : transcript_id=ENSMUST00000195259 protein_id : ENSMUSP00000142056 translation : MANDSPAKSLVDIDLSSLRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDDQLWLVMEFCGAGSITDLVKNTKGNTLKEDWIAYISREILRGLAHLHIHHVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDLWSCGITAIEMAEGAPPLCDMHPMRALFLIPRNPPPRLKSKKWSKKFFSFIEGCLVKNYMQRPSTEQLLKHPFIRDQPNERQVRIQLKDHIDRTRKKRGEKDETEYEYSGSEEEEEEVPEQEGEPSSIVNVPGESTLRRDFLRLQQENKERSEALRRQQLLQEQQLREQEEYKRQLLAERQKRIEQQKEQRRRLEEQQRREREARRQQEREQRRREQEEKRRLEELERRRKEEEERRRAEEEKRRVEREQEYIRRQLEEEQRHLEILQQQLLQEQAMLLHDHRRPHAQQQPPPPQQQDRSKPSFHAPEPKPHYDPADRAREVEDRFRKTNHSSPEAQAKQTGRGLEPPVPSRSESFSNGNSESVHPALQRPAEPQVPVRTTSRSPVLSRRDSPLQGGGQQNSQAGQRNSTSSIEPRLLWERVEKLVPRPGSGSSSGSSNSGSQPGSHPGSQSGSGERFRVRSSSKSEGSPSPRQESAAKKPDDKKEVFRPLKPADLTALAKELRAVEDVRPPHKVTDYSSSSEESGTTDEEEEDVEQEGADDSTSGPEDTRAASSPNLSNGETESVKTMIVHDDVESEPAMTPSKEGTLIVRQTQSASSTLQKHKSSSSFTPFIDPRLLQISPSSGTTVTSVVGFSCDGLRPEAIRQDPTRKGSVVNVNPTNTRPQSDTPEIRKYKKRFNSEILCAALWGVNLLVGTESGLMLLDRSGQGKVYPLISRRRFQQMDVLEGLNVLVTISGKKDKLRVYYLSWLRNKILHNDPEVEKKQGWTTVGDLEGCVHYKVVKYERIKFLVIALKSSVEVYAWAPKPYHKFMAFKSFGELLHKPLLVDLTVEEGQRLKVIYGSCAGFHAVDVDSGSVYDIYLPTHIQCSIKPHAIIILPNTDGMELLVCYEDEGVYVNTYGRITKDVVLQWGEMPTSVAYIRSNQTMGWGEKAIEIRSVETGHLDGVFMHKRAQRLKFLCERNDKVFFASVRSGGSSQVYFMTLGRTSLLSW

name	Map4k4 (ENSMUSG00000026074) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	RefSeq_peptide_predicted:XP_006496106.1 Vega_transcript:Map4k4-017 Vega_transcript:OTTMUST00000127978 Uniprot/SPTREMBL:A0A0A6YWM8 UCSC:uc011wjx.1 EMBL:AC132909 EMBL:AC166238 GO:GO:0000165 GO:GO:0004111 GO:GO:0004674 GO:GO:0005524 GO:GO:0005737 GO:GO:0006468 GO:GO:0007346 GO:GO:0031098 GO:GO:0032147 GO:GO:0035556 GO:GO:0042981 GO:GO:0043066 GO:GO:0046328 GO:GO:0048812 MGI_trans_name:Map4k4-017 Vega_translation:179110 Vega_translation:OTTMUSP00000068930 goslim_goa:GO:0000902 goslim_goa:GO:0003674 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005737 goslim_goa:GO:0006464 goslim_goa:GO:0006950 goslim_goa:GO:0007165 goslim_goa:GO:0008150 goslim_goa:GO:0016301 goslim_goa:GO:0030154 goslim_goa:GO:0043167 goslim_goa:GO:0048856 OTTP:OTTMUSP00000068930 OTTT:OTTMUST00000127978 UniParc:UPI0003D770E9
definition	note : transcript_id=ENSMUST00000195636 protein_id : ENSMUSP00000141613 translation : MANDSPAKSLVDIDLSSLRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDDQLWLVMEFCGAGSITDLVKNTKGNTLKEDWIAYISREILRGLAHLHIHHVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDLWSCGITAIEMAEGAPPLCDMHPMRALFLIPRNPPPRLKSKKWSKKFFSFIEGCLVKNYMQRPSTEQLLKHPFIRDQPNERQVRIQLKDHIDRTRKKRGEKDETEYEYSGSEEEEEEVPEQEGEPSSIVNVPGESTLRRDFLRLQQENKERSEALRRQQLLQEQQLREQEEYKRQLLAERQKRIEQQKEQRRRLEEQQRREREARRQQEREQRRREQEEKRRLEELERRRKEEEERRRAEEEKRRVEREQEYIRRQLEEEQRHLEILQQQLLQEQAMLLHDHRRPHAQQQPPPPQQQDRSKPSFHAPEPKPHYDPADRAREVEDRFRKTNHSSPEAQAKQTGRGLEPPVPSRSESFSNGNSESVHPALQRPAEPQVPVRTTSRSPVLSRRDSPLQGGGQQNSQAGQRNSTSSIEPRLLWERVEKLVPRPGSGSSSGSSNSGSQPGSHPGSQSGSGERFRVRSSSKSEGSPSPRQESAAKKPDDKKEVFRPLKPADLTALAKELRAVEDVRPPHKVTDYSSSSEESGTTDEEEEDVEQEGADDSTSGPEDTRAASSPNLSNGETESVKTMIVHDDVESEPAMTPSKEGTLIVRQSTVDQKRASHHESNGFAGRIHLLPDLLQQSHSSSTSSTSSSPSSSQPTPTMSPQTPQDKLTANETQSASSTLQKHKSSSSFTPFIDPRLLQISPSSGTTVTSVVGFSCDGLRPEAIRQDPTRKGSVVNVNPTNTRPQSDTPEIRKYKKRFNSEILCAALWGVNLLVGTESGLMLLDRSGQGKVYPLISRRRFQQMDVLEGLNVLVTISGKKDKLRVYYLSWLRNKILHNDPEVEKKQGWTTVGDLEGCVHYKVVKYERIKFLVIALKSSVEVYAWAPKPYHKFMAFKSFGELLHKPLLVDLTVEEGQRLKVIYGSCAGFHAVDVDSGSVYDIYLPTHIQCSIKPHAIIILPNTDGMELLVCYEDEGVYVNTYGRITKDVVLQWGEMPTSVAYIRSNQTMGWGEKAIEIRSVETGHLDGVFMHKRAQRLKFLCERNDKVFFASVRSGGSSQVYFMTLGRTSLLSW

name	Map4k4 (ENSMUSG00000026074) (Detail)
type	CDS
link	VEGA Ensembl MGI
xref	CCDS:CCDS35546.1 RefSeq_peptide:NP_032722 RefSeq_mRNA:NM_008696.2 Vega_transcript:Map4k4-002 Vega_transcript:OTTMUST00000127981 Uniprot/SPTREMBL:A0A0A6YWR8 UCSC:uc007atr.1 EMBL:AC132909 EMBL:AC166238 GO:GO:0000165 GO:GO:0004111 GO:GO:0004674 GO:GO:0005524 GO:GO:0005737 GO:GO:0006468 GO:GO:0007346 GO:GO:0031098 GO:GO:0032147 GO:GO:0035556 GO:GO:0042981 GO:GO:0043066 GO:GO:0046328 GO:GO:0048812 MGI_trans_name:Map4k4-002 Vega_translation:179111 Vega_translation:OTTMUSP00000068931 goslim_goa:GO:0000902 goslim_goa:GO:0003674 goslim_goa:GO:0005575 goslim_goa:GO:0005622 goslim_goa:GO:0005623 goslim_goa:GO:0005737 goslim_goa:GO:0006464 goslim_goa:GO:0006950 goslim_goa:GO:0007165 goslim_goa:GO:0008150 goslim_goa:GO:0016301 goslim_goa:GO:0030154 goslim_goa:GO:0043167 goslim_goa:GO:0048856 OTTP:OTTMUSP00000068931 OTTT:OTTMUST00000127981 UniParc:UPI00014F6E6B
definition	note : transcript_id=ENSMUST00000192509 protein_id : ENSMUSP00000141665 translation : MANDSPAKSLVDIDLSSLRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDDQLWLVMEFCGAGSITDLVKNTKGNTLKEDWIAYISREILRGLAHLHIHHVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDLWSCGITAIEMAEGAPPLCDMHPMRALFLIPRNPPPRLKSKKWSKKFFSFIEGCLVKNYMQRPSTEQLLKHPFIRDQPNERQVRIQLKDHIDRTRKKRGEKDETEYEYSGSEEEEEEVPEQEGEPSSIVNVPGESTLRRDFLRLQQENKERSEALRRQQLLQEQQLREQEEYKRQLLAERQKRIEQQKEQRRRLEEQQRREREARRQQEREQRRREQEEKRRLEELERRRKEEEERRRAEEEKRRVEREQEYIRRQLEEEQRHLEILQQQLLQEQAMLLHDHRRPHAQQQPPPPQQQDRSKPSFHAPEPKPHYDPADRAREVQWSHLASLKNNVSPVSRSHSFSDPSPKFAHHHLRSQDPCPPSRSEGLSQSSDSKSEVPEPTQKAWSRSDSDEVPPRVPVRTTSRSPVLSRRDSPLQGGGQQNSQAGQRNSTSSIEPRLLWERVEKLVPRPGSGSSSGSSNSGSQPGSHPGSQSGSGERFRVRSSSKSEGSPSPRQESAAKKPDDKKEVFRPLKPAGEVDLTALAKELRAVEDVRPPHKVTDYSSSSEESGTTDEEEEDVEQEGADDSTSGPEDTRAASSPNLSNGETESVKTMIVHDDVESEPAMTPSKEGTLIVRQTQSASSTLQKHKSSSSFTPFIDPRLLQISPSSGTTVTSVVGFSCDGLRPEAIRQDPTRKGSVVNVNPTNTRPQSDTPEIRKYKKRFNSEILCAALWGVNLLVGTESGLMLLDRSGQGKVYPLISRRRFQQMDVLEGLNVLVTISGKKDKLRVYYLSWLRNKILHNDPEVEKKQGWTTVGDLEGCVHYKVVKYERIKFLVIALKSSVEVYAWAPKPYHKFMAFKSFGELLHKPLLVDLTVEEGQRLKVIYGSCAGFHAVDVDSGSVYDIYLPTHIQCSIKPHAIIILPNTDGMELLVCYEDEGVYVNTYGRITKDVVLQWGEMPTSVAYIRSNQTMGWGEKAIEIRSVETGHLDGVFMHKRAQRLKFLCERNDKVFFASVRSGGSSQVYFMTLGRTSLLSW

name
type	misc_feature
link
xref
definition	note : contig AC166238.7 1..151225(-1)

name
type	misc_feature
link
xref
definition	note : contig AC132909.14 91280..185140(1)

name	Map4k4 (ENSMUSG00000026074)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000127973 Vega_transcript:OTTMUST00000127973 MGI_trans_name:Map4k4-001 OTTT:OTTMUST00000127973
definition	note : retained_intron note : transcript_id=ENSMUST00000193661

name	Map4k4 (ENSMUSG00000026074)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000127983 Vega_transcript:OTTMUST00000127983 MGI_trans_name:Map4k4-011 OTTT:OTTMUST00000127983
definition	note : processed_transcript note : transcript_id=ENSMUST00000193514

name	Map4k4 (ENSMUSG00000026074)
type	misc_RNA
link	VEGA Ensembl MGI
xref	Vega_transcript:OTTMUST00000127984 Vega_transcript:OTTMUST00000127984 MGI_trans_name:Map4k4-012 OTTT:OTTMUST00000127984
definition	note : processed_transcript note : transcript_id=ENSMUST00000194163

Polymorphisms Report

Target Strain	MSMv4 JF1v3 KJRv1 SWNv1 CHDv1 NJLv1 BLG2v1 HMIv1 BFMv1 PGN2v1

Gene Symbol (Gene ID)	Map4k4 (ENSMUSG00000026074)
Transcript ID	ENSMUST00000191761

Reports
substitution
cSNPs	4
Insertion	47
Deletion	72
SNPs	-1kb 39896176(c.-5054A>G), 39896299(c.-4931A>G), 39896321(c.-4909G>T), 39896422(c.-4808T>C), 39896431(c.-4799A>T), 39896695(c.-4535T>G), 39896994(c.-4236C>T), 39897108(c.-4122A>G), 39897388(c.-3842C>T), 39897459(c.-3771G>A), 39897498(c.-3732C>A), 39897595(c.-3635T>C), 39898155(c.-3075G>C), 39898281(c.-2949A>C), 39898455(c.-2775A>C), 39898520(c.-2710G>C), 39898664(c.-2566A>C), 39898777(c.-2453G>A), 39898792(c.-2438G>A), 39898882(c.-2348C>A), 39898967(c.-2263G>A), 39898976(c.-2254C>T), 39899021(c.-2209C>G), 39899040(c.-2190T>A), 39899162(c.-2068G>A), 39899174(c.-2056C>T), 39899276(c.-1954A>C), 39899405(c.-1825G>A), 39899528(c.-1702G>C), 39899711(c.-1519T>C), 39899972(c.-1258C>T), 39900002(c.-1228C>G), 39900018(c.-1212C>T), 39900607(c.-623T>C), 39900721(c.-509G>C), 39901089(c.-141T>G), 5'UTR CDS 39962219(c.165T>C), 39962225(c.171C>T), 39980595(c.453C>T), 39986727(c.876G>A), 3'UTR INTRON 39901382(c.57+96A>G), 39902002(c.123+428A>T), 39902036(c.123+462G>A), 39902293(c.123+719C>A), 39902428(c.123+854G>C), 39902471(c.123+897A>C), 39902653(c.123+1079C>T), 39902878(c.123+1304C>T), 39903164(c.123+1590C>A), 39903263(c.123+1689C>G), 39903286(c.123+1712T>C), 39903420(c.123+1846T>G), 39904051(c.123+2477C>G), 39904571(c.123+2997C>G), 39904779(c.123+3205T>C), 39905248(c.123+3674A>G), 39905282(c.123+3708T>C), 39905363(c.123+3789A>C), 39906031(c.123+4457C>T), 39906177(c.123+4603C>G), 39906335(c.123+4761C>T), 39906370(c.123+4796C>T), 39906663(c.123+5089C>A), 39906772(c.123+5198T>G), 39906939(c.123+5365T>C), 39906996(c.123+5422A>G), 39907003(c.123+5429T>C), 39907126(c.123+5552C>A), 39907259(c.123+5685C>T), 39907295(c.123+5721C>T), 39907412(c.123+5838T>G), 39907536(c.123+5962G>A), 39907593(c.123+6019T>C), 39907627(c.123+6053C>T), 39907691(c.123+6117A>C), 39907695(c.123+6121G>A), 39907806(c.123+6232T>C), 39907874(c.123+6300C>T), 39907956(c.123+6382G>T), 39907984(c.123+6410G>A), 39908006(c.123+6432C>T), 39909072(c.123+7498G>A), 39909136(c.123+7562G>T), 39909169(c.123+7595T>C), 39909181(c.123+7607T>C), 39909353(c.123+7779A>T), 39909385(c.123+7811A>T), 39909487(c.123+7913T>C), 39909603(c.123+8029C>T), 39909761(c.123+8187C>T), 39909800(c.123+8226T>G), 39909852(c.123+8278A>G), 39909872(c.123+8298T>A), 39909928(c.123+8354T>C), 39909981(c.123+8407G>T), 39910309(c.123+8735G>C), 39910561(c.123+8987T>G), 39910565(c.123+8991T>C), 39910731(c.123+9157C>T), 39910739(c.123+9165G>C), 39910740(c.123+9166A>T), 39910741(c.123+9167C>T), 39910781(c.123+9207A>G), 39910830(c.123+9256A>G), 39910838(c.123+9264G>C), 39911017(c.123+9443T>C), 39911036(c.123+9462C>T), 39911294(c.123+9720G>C), 39911678(c.123+10104T>C), 39911703(c.123+10129G>A), 39911767(c.123+10193T>C), 39912024(c.123+10450A>G), 39912028(c.123+10454C>T), 39912197(c.123+10623T>C), 39912351(c.123+10777G>A), 39912435(c.123+10861G>A), 39912667(c.123+11093T>C), 39912977(c.123+11403A>T), 39913017(c.123+11443T>C), 39913048(c.123+11474G>T), 39913079(c.123+11505A>C), 39913171(c.123+11597G>A), 39913252(c.123+11678T>G), 39913341(c.123+11767T>C), 39913407(c.123+11833G>A), 39913500(c.123+11926T>C), 39913637(c.123+12063A>T), 39913753(c.123+12179A>T), 39913765(c.123+12191A>G), 39913797(c.123+12223T>C), 39913819(c.123+12245A>T), 39913920(c.123+12346C>T), 39913921(c.123+12347A>G), 39913952(c.123+12378C>A), 39913954(c.123+12380G>T), 39913961(c.123+12387C>T), 39914032(c.123+12458G>A), 39914073(c.123+12499T>C), 39914114(c.123+12540A>G), 39914158(c.123+12584A>C), 39914170(c.123+12596C>G), 39914194(c.123+12620T>A), 39914626(c.123+13052T>C), 39914670(c.123+13096C>A), 39914671(c.123+13097A>G), 39914677(c.123+13103C>T), 39915012(c.123+13438C>T), 39915073(c.123+13499C>T), 39915083(c.123+13509T>C), 39915103(c.123+13529C>T), 39915126(c.123+13552G>T), 39915189(c.123+13615G>A), 39915235(c.123+13661T>C), 39915297(c.123+13723T>C), 39915330(c.123+13756C>T), 39915459(c.123+13885G>A), 39915502(c.123+13928A>G), 39915546(c.123+13972T>C), 39915565(c.123+13991G>A), 39915871(c.123+14297A>G), 39916018(c.123+14444T>C), 39916054(c.123+14480A>T), 39916184(c.123+14610G>A), 39916191(c.123+14617C>G), 39916251(c.123+14677C>G), 39916309(c.123+14735T>C), 39916431(c.123+14857T>C), 39916554(c.123+14980T>G), 39916559(c.123+14985A>T), 39916854(c.123+15280C>G), 39916899(c.123+15325G>C), 39917126(c.123+15552A>G), 39917168(c.123+15594G>A), 39917178(c.123+15604T>C), 39917191(c.123+15617G>A), 39917272(c.123+15698G>A), 39917394(c.123+15820A>G), 39917511(c.123+15937T>C), 39917522(c.123+15948T>C), 39917903(c.123+16329G>T), 39917952(c.123+16378A>G), 39918067(c.123+16493G>C), 39918106(c.123+16532G>A), 39918135(c.123+16561C>T), 39918144(c.123+16570A>G), 39918154(c.123+16580T>C), 39918173(c.123+16599C>A), 39918204(c.123+16630G>A), 39918791(c.123+17217T>C), 39918974(c.123+17400C>T), 39919087(c.123+17513G>A), 39919242(c.123+17668A>G), 39919483(c.123+17909T>C), 39919538(c.123+17964C>T), 39919645(c.123+18071T>C), 39919911(c.123+18337C>T), 39919970(c.123+18396A>G), 39920006(c.123+18432A>C), 39920289(c.123+18715A>T), 39920486(c.123+18912C>T), 39920498(c.123+18924C>A), 39920598(c.123+19024G>A), 39920655(c.123+19081T>C), 39920881(c.123+19307A>G), 39921110(c.123+19536G>A), 39921225(c.123+19651G>A), 39921298(c.123+19724A>G), 39921994(c.123+20420T>C), 39922094(c.123+20520A>G), 39922137(c.123+20563T>C), 39922561(c.123+20987G>A), 39922616(c.123+21042A>G), 39923293(c.123+21719A>T), 39923330(c.123+21756T>G), 39923365(c.123+21791C>T), 39923388(c.123+21814C>T), 39923522(c.123+21948A>G), 39923683(c.123+22109C>T), 39923848(c.123+22274C>A), 39924845(c.123+23271C>T), 39924975(c.123+23401C>T), 39924976(c.123+23402A>G), 39925262(c.123+23688C>T), 39926001(c.123+24427T>C), 39926119(c.123+24545G>A), 39926715(c.123+25141C>T), 39926743(c.123+25169T>A), 39926874(c.123+25300C>T), 39927002(c.123+25428C>T), 39927289(c.123+25715G>A), 39927292(c.123+25718A>T), 39927515(c.123+25941C>T), 39927755(c.123+26181G>C), 39927812(c.123+26238A>G), 39927921(c.123+26347T>C), 39927948(c.123+26374A>T), 39928045(c.123+26471T>C), 39928226(c.123+26652G>A), 39928518(c.123+26944T>C), 39928675(c.123+27101A>G), 39928866(c.123+27292G>A), 39929009(c.123+27435T>C), 39929013(c.123+27439A>G), 39929049(c.123+27475C>T), 39929303(c.123+27729T>C), 39929928(c.123+28354T>C), 39929940(c.123+28366T>A), 39930392(c.123+28818T>C), 39930393(c.123+28819T>C), 39930405(c.123+28831T>C), 39930432(c.123+28858T>C), 39930773(c.123+29199T>G), 39930895(c.123+29321A>G), 39932020(c.124-30158T>C), 39932027(c.124-30151C>T), 39932173(c.124-30005C>T), 39932199(c.124-29979A>G), 39932512(c.124-29666A>G), 39932689(c.124-29489G>T), 39933044(c.124-29134T>C), 39933237(c.124-28941C>T), 39933571(c.124-28607G>A), 39933582(c.124-28596T>C), 39933624(c.124-28554G>A), 39933656(c.124-28522A>G), 39933709(c.124-28469A>G), 39933716(c.124-28462G>A), 39933920(c.124-28258G>C), 39933928(c.124-28250C>T), 39933971(c.124-28207T>C), 39934029(c.124-28149T>C), 39934030(c.124-28148G>A), 39934136(c.124-28042G>A), 39934344(c.124-27834A>C), 39934346(c.124-27832A>G), 39934372(c.124-27806G>A), 39934421(c.124-27757A>C), 39934438(c.124-27740G>T), 39934446(c.124-27732T>C), 39934484(c.124-27694C>T), 39934498(c.124-27680G>A), 39934536(c.124-27642T>C), 39934608(c.124-27570A>G), 39934625(c.124-27553T>C), 39934708(c.124-27470C>G), 39934802(c.124-27376A>G), 39934856(c.124-27322A>G), 39934860(c.124-27318G>C), 39935000(c.124-27178C>T), 39935015(c.124-27163T>C), 39935039(c.124-27139T>C), 39935084(c.124-27094A>C), 39935206(c.124-26972A>G), 39935257(c.124-26921A>G), 39935391(c.124-26787T>C), 39935656(c.124-26522T>C), 39936388(c.124-25790T>C), 39936417(c.124-25761C>T), 39936432(c.124-25746A>G), 39936442(c.124-25736C>T), 39936828(c.124-25350C>T), 39936873(c.124-25305A>G), 39936918(c.124-25260A>C), 39936920(c.124-25258G>T), 39937056(c.124-25122T>C), 39937161(c.124-25017T>G), 39937294(c.124-24884C>T), 39937892(c.124-24286T>C), 39937906(c.124-24272A>T), 39938293(c.124-23885T>G), 39938406(c.124-23772T>C), 39938407(c.124-23771T>C), 39938593(c.124-23585T>C), 39938611(c.124-23567C>G), 39938848(c.124-23330C>T), 39939248(c.124-22930T>G), 39939318(c.124-22860C>A), 39939445(c.124-22733G>A), 39939468(c.124-22710G>A), 39939558(c.124-22620T>C), 39939679(c.124-22499T>C), 39939705(c.124-22473T>C), 39939753(c.124-22425T>C), 39939890(c.124-22288C>T), 39939900(c.124-22278T>C), 39939935(c.124-22243G>T), 39939984(c.124-22194T>C), 39939985(c.124-22193A>G), 39940057(c.124-22121C>T), 39940327(c.124-21851A>C), 39940528(c.124-21650T>C), 39940726(c.124-21452G>A), 39940758(c.124-21420C>G), 39941038(c.124-21140G>C), 39941049(c.124-21129A>G), 39941067(c.124-21111T>C), 39941070(c.124-21108G>T), 39941074(c.124-21104T>C), 39941179(c.124-20999T>C), 39941691(c.124-20487C>T), 39941708(c.124-20470G>A), 39941734(c.124-20444T>C), 39941941(c.124-20237C>T), 39942061(c.124-20117C>T), 39942071(c.124-20107T>C), 39942141(c.124-20037T>C), 39942371(c.124-19807T>C), 39942372(c.124-19806T>A), 39942414(c.124-19764A>G), 39942468(c.124-19710C>T), 39942469(c.124-19709A>G), 39942581(c.124-19597T>C), 39942652(c.124-19526G>A), 39942764(c.124-19414G>A), 39943053(c.124-19125C>T), 39943057(c.124-19121T>C), 39943126(c.124-19052G>A), 39943184(c.124-18994G>A), 39943311(c.124-18867A>C), 39943315(c.124-18863C>T), 39943360(c.124-18818G>A), 39943970(c.124-18208G>A), 39944874(c.124-17304C>T), 39945028(c.124-17150A>G), 39945255(c.124-16923T>C), 39945448(c.124-16730A>T), 39945524(c.124-16654A>G), 39945630(c.124-16548G>A), 39945663(c.124-16515C>T), 39945760(c.124-16418C>T), 39946056(c.124-16122T>A), 39946321(c.124-15857G>A), 39947197(c.124-14981G>A), 39947426(c.124-14752C>T), 39947663(c.124-14515G>A), 39948729(c.124-13449C>T), 39948747(c.124-13431G>C), 39948979(c.124-13199C>T), 39949526(c.124-12652C>T), 39949598(c.124-12580A>G), 39950166(c.124-12012G>T), 39950526(c.124-11652A>G), 39951028(c.124-11150T>C), 39951239(c.124-10939G>C), 39951262(c.124-10916G>A), 39951417(c.124-10761C>T), 39951418(c.124-10760T>C), 39951837(c.124-10341A>C), 39951871(c.124-10307C>G), 39951905(c.124-10273C>T), 39952093(c.124-10085A>G), 39952155(c.124-10023T>A), 39952230(c.124-9948T>C), 39952448(c.124-9730G>A), 39952491(c.124-9687G>A), 39952547(c.124-9631T>G), 39952816(c.124-9362C>A), 39952828(c.124-9350T>C), 39952850(c.124-9328A>G), 39952852(c.124-9326A>G), 39952945(c.124-9233C>G), 39953073(c.124-9105A>T), 39953199(c.124-8979G>A), 39953390(c.124-8788C>G), 39953423(c.124-8755T>G), 39953548(c.124-8630G>C), 39953981(c.124-8197A>C), 39954036(c.124-8142T>C), 39954155(c.124-8023T>C), 39954404(c.124-7774G>A), 39954566(c.124-7612A>G), 39954668(c.124-7510C>T), 39954731(c.124-7447G>A), 39954743(c.124-7435G>A), 39954866(c.124-7312C>T), 39955085(c.124-7093C>T), 39955219(c.124-6959C>T), 39955295(c.124-6883C>T), 39955347(c.124-6831C>T), 39955392(c.124-6786T>C), 39955417(c.124-6761A>G), 39955478(c.124-6700A>G), 39955555(c.124-6623G>A), 39955643(c.124-6535T>G), 39955646(c.124-6532G>T), 39955743(c.124-6435A>G), 39955749(c.124-6429T>C), 39955779(c.124-6399C>A), 39955813(c.124-6365A>G), 39955864(c.124-6314G>A), 39955956(c.124-6222A>G), 39955981(c.124-6197A>G), 39956228(c.124-5950C>T), 39956229(c.124-5949A>G), 39956281(c.124-5897A>G), 39956285(c.124-5893A>T), 39956319(c.124-5859C>G), 39956364(c.124-5814A>G), 39956425(c.124-5753C>T), 39956453(c.124-5725T>G), 39956469(c.124-5709T>C), 39956489(c.124-5689T>C), 39956503(c.124-5675G>A), 39956599(c.124-5579C>T), 39956648(c.124-5530G>A), 39956670(c.124-5508A>C), 39956807(c.124-5371A>T), 39956928(c.124-5250A>C), 39956967(c.124-5211T>C), 39957090(c.124-5088A>G), 39957138(c.124-5040C>G), 39957156(c.124-5022C>T), 39957157(c.124-5021A>G), 39957188(c.124-4990T>A), 39957439(c.124-4739C>T), 39957523(c.124-4655C>T), 39957539(c.124-4639T>C), 39957597(c.124-4581G>T), 39957778(c.124-4400T>G), 39957893(c.124-4285C>T), 39957946(c.124-4232T>G), 39957951(c.124-4227T>C), 39958688(c.124-3490C>G), 39958952(c.124-3226C>A), 39959504(c.124-2674G>A), 39959519(c.124-2659G>T), 39959555(c.124-2623G>A), 39959662(c.124-2516C>T), 39959696(c.124-2482T>C), 39959750(c.124-2428A>G), 39959777(c.124-2401T>C), 39959806(c.124-2372A>G), 39959826(c.124-2352T>C), 39959827(c.124-2351G>A), 39959900(c.124-2278G>C), 39959904(c.124-2274T>C), 39959925(c.124-2253G>A), 39959961(c.124-2217C>G), 39959996(c.124-2182T>C), 39960008(c.124-2170C>T), 39960122(c.124-2056T>C), 39960310(c.124-1868G>A), 39960338(c.124-1840A>T), 39960370(c.124-1808C>G), 39960392(c.124-1786C>T), 39960461(c.124-1717C>G), 39960502(c.124-1676G>C), 39960609(c.124-1569T>A), 39960630(c.124-1548G>T), 39960631(c.124-1547G>C), 39960632(c.124-1546A>T), 39960771(c.124-1407C>T), 39960875(c.124-1303G>A), 39960933(c.124-1245C>T), 39961271(c.124-907G>A), 39961302(c.124-876G>T), 39961306(c.124-872C>T), 39961685(c.124-493C>T), 39961687(c.124-491A>G), 39961688(c.124-490G>T), 39961822(c.124-356C>T), 39961827(c.124-351G>A), 39961903(c.124-275G>A), 39961940(c.124-238T>C), 39961957(c.124-221T>G), 39962066(c.124-112T>G), 39962085(c.124-93G>A), 39962100(c.124-78T>A), 39962131(c.124-47C>T), 39962241(c.180+7T>C), 39962248(c.180+14A>G), 39962288(c.180+54G>A), 39962443(c.180+209C>T), 39962557(c.180+323T>G), 39962561(c.180+327G>A), 39962585(c.180+351C>G), 39962813(c.180+579C>T), 39962821(c.180+587A>C), 39962856(c.180+622T>G), 39963003(c.180+769T>C), 39963107(c.180+873A>G), 39963148(c.180+914C>T), 39963232(c.180+998G>A), 39963290(c.180+1056T>C), 39963336(c.180+1102G>A), 39963410(c.180+1176C>T), 39963487(c.180+1253G>A), 39963490(c.180+1256G>T), 39963740(c.180+1506G>A), 39964126(c.180+1892G>A), 39964146(c.180+1912G>A), 39964153(c.180+1919T>C), 39964158(c.180+1924T>C), 39964159(c.180+1925G>A), 39964160(c.180+1926A>C), 39964784(c.180+2550T>G), 39964826(c.180+2592C>A), 39965046(c.180+2812C>G), 39965073(c.180+2839G>T), 39965074(c.180+2840C>A), 39965171(c.180+2937T>C), 39965174(c.180+2940A>G), 39965323(c.180+3089A>G), 39965357(c.180+3123A>T), 39965490(c.180+3256T>A), 39965491(c.180+3257C>G), 39965493(c.180+3259T>A), 39965542(c.180+3308C>A), 39965560(c.180+3326C>G), 39965619(c.180+3385A>G), 39965629(c.180+3395A>T), 39965632(c.180+3398G>A), 39965703(c.180+3469G>A), 39966015(c.180+3781C>T), 39966045(c.180+3811A>G), 39968361(c.181-5566G>A), 39968364(c.181-5563T>G), 39968374(c.181-5553A>C), 39968429(c.181-5498T>A), 39968447(c.181-5480C>G), 39968486(c.181-5441C>A), 39968492(c.181-5435A>C), 39968539(c.181-5388A>G), 39968547(c.181-5380T>C), 39968582(c.181-5345T>G), 39968668(c.181-5259A>G), 39968753(c.181-5174T>C), 39968789(c.181-5138A>G), 39968887(c.181-5040G>C), 39968984(c.181-4943T>C), 39968988(c.181-4939T>C), 39968992(c.181-4935T>C), 39968995(c.181-4932T>G), 39968996(c.181-4931G>T), 39969116(c.181-4811C>T), 39969277(c.181-4650C>T), 39969290(c.181-4637C>T), 39969306(c.181-4621C>T), 39969330(c.181-4597A>G), 39969395(c.181-4532T>C), 39969443(c.181-4484A>G), 39969618(c.181-4309T>A), 39969692(c.181-4235A>G), 39969697(c.181-4230C>T), 39969720(c.181-4207A>T), 39969725(c.181-4202T>C), 39969726(c.181-4201G>A), 39969742(c.181-4185T>C), 39969828(c.181-4099C>T), 39969871(c.181-4056A>G), 39969890(c.181-4037A>C), 39969998(c.181-3929G>T), 39970001(c.181-3926T>C), 39970057(c.181-3870A>G), 39970161(c.181-3766A>G), 39970230(c.181-3697C>G), 39970303(c.181-3624T>C), 39970329(c.181-3598T>G), 39970617(c.181-3310A>G), 39970628(c.181-3299A>G), 39970948(c.181-2979T>C), 39971201(c.181-2726G>C), 39971337(c.181-2590G>C), 39971342(c.181-2585A>G), 39971434(c.181-2493T>G), 39971487(c.181-2440C>A), 39971762(c.181-2165C>T), 39971763(c.181-2164T>G), 39972298(c.181-1629A>G), 39972313(c.181-1614C>A), 39972516(c.181-1411C>G), 39972551(c.181-1376T>C), 39972624(c.181-1303C>T), 39972644(c.181-1283G>A), 39972909(c.181-1018C>T), 39973268(c.181-659T>C), 39973325(c.181-602T>C), 39973351(c.181-576C>T), 39973353(c.181-574T>C), 39973723(c.181-204T>C), 39973771(c.181-156G>A), 39973796(c.181-131C>T), 39973807(c.181-120G>C), 39973854(c.181-73T>G), 39973914(c.181-13T>C), 39974175(c.306+123C>T), 39974290(c.306+238A>T), 39974501(c.306+449G>A), 39974758(c.306+706T>A), 39974822(c.306+770T>G), 39974870(c.306+818C>A), 39974882(c.306+830G>T), 39975390(c.307-1317G>A), 39975613(c.307-1094A>T), 39975777(c.307-930G>A), 39975922(c.307-785C>T), 39976387(c.307-320T>C), 39976400(c.307-307G>A), 39976540(c.307-167G>A), 39976901(c.417+84C>T), 39976966(c.417+149C>T), 39976976(c.417+159G>A), 39977097(c.417+280C>T), 39978125(c.417+1308G>A), 39978626(c.417+1809A>G), 39978630(c.417+1813G>A), 39979904(c.418-656A>G), 39980256(c.418-304G>A), 39980468(c.418-92G>C), 39980693(c.508+43C>T), 39980710(c.508+60G>A), 39981068(c.508+418A>G), 39981069(c.508+419T>A), 39981634(c.508+984T>G), 39981921(c.509-1218G>A), 39982041(c.509-1098G>A), 39982095(c.509-1044G>A), 39982158(c.509-981C>T), 39982204(c.509-935C>T), 39982364(c.509-775T>C), 39982980(c.509-159T>G), 39983019(c.509-120C>T), 39983069(c.509-70G>A), 39983437(c.639+168C>T), 39983482(c.639+213T>A), 39983688(c.640-195C>T), 39983728(c.640-155C>T), 39983862(c.640-21C>T), 39984385(c.694+448T>G), 39984536(c.694+599T>C), 39984593(c.695-589A>C), 39984622(c.695-560G>C), 39984713(c.695-469G>A), 39984720(c.695-462G>C), 39984782(c.695-400C>T), 39984911(c.695-271C>A), 39985372(c.773+112T>C), 39985548(c.773+288A>G), 39985551(c.773+291A>G), 39985580(c.773+320G>A), 39985714(c.773+454A>G), 39985726(c.773+466A>C), 39985869(c.773+609G>A), 39985965(c.774-660G>A), 39986014(c.774-611T>C), 39986026(c.774-599G>T), 39986037(c.774-588T>C), 39986083(c.774-542T>C), 39986160(c.774-465C>G), 39986217(c.774-408G>C), 39986226(c.774-399G>T), 39986256(c.774-369G>C), 39986273(c.774-352C>G), 39986313(c.774-312C>A), 39986329(c.774-296C>G), 39986350(c.774-275A>G), 39986366(c.774-259A>G), 39986367(c.774-258C>T), 39986385(c.774-240C>G), 39986422(c.774-203A>G), 39986423(c.774-202C>T), 39986441(c.774-184C>G), 39986454(c.774-171T>C), 39986480(c.774-145C>G), 39986481(c.774-144C>A), 39986490(c.774-135C>T), 39986497(c.774-128C>G), 39986550(c.774-75C>T), 39986600(c.774-25T>C), 39986601(c.774-24G>A), 39986622(c.774-3C>A), 39986833(c.949+33C>T), 39986873(c.949+73C>T), 39986973(c.949+173C>T), 39988892(c.950-78C>T), 39989061(c.1022+19C>T), 39989079(c.1022+37T>C), 39989194(c.1022+152C>A), 39989336(c.1022+294G>A), 39989484(c.1022+442G>C), 39989505(c.1022+463G>A), 39989675(c.1023-414C>T), +1kb 39990692(c.414T>C), 39990753(c.475A>G), 39990801(c.523A>G), 39990889(c.611A>C), 39991533(c.1255T>C), 39991545(c.1267T>A), 39991555(c.1277T>A), 39991773(c.1495T>C), 39991872(c.1594G>C), 39991906(c.1628A>G), 39991959(c.1681T>C), 39991983(c.1705G>A), 39992036(c.1758A>G), 39992150(c.1872C>T), 39992174(c.1896A>G), 39992175(c.1897T>C), 39992218(c.1940C>T), 39992361(c.2083A>C), 39992581(c.2303T>C), 39992616(c.2338G>A), 39992651(c.2373G>A), 39992700(c.2422G>T), 39992717(c.2439T>C), 39992857(c.2579C>G), 39992876(c.2598G>A), 39992890(c.2612G>A), 39992900(c.2622G>A), 39992984(c.2706A>G), 39993244(c.2966G>A), 39993249(c.2971G>A), 39993280(c.3002G>T), 39993338(c.3060C>T), 39993461(c.3183G>A), 39993584(c.3306G>T), 39993754(c.3476A>G), 39993790(c.3512A>T), 39993815(c.3537A>G), 39993842(c.3564A>G), 39993872(c.3594T>C), 39993997(c.3719G>A), 39994007(c.3729G>A), 39994036(c.3758T>G), 39994193(c.3915A>G), 39994294(c.4016C>A), 39994324(c.4046C>T), 39994502(c.4224G>A), 39994522(c.4244T>C), 39994538(c.4260C>T), 39994638(c.4360A>C), 39994641(c.4363T>A), 39994652(c.4374A>G), 39994656(c.4378A>C), 39994664(c.4386T>G), 39994853(c.4575C>A), 39994885(c.4607A>G), 39995126(c.4848C>T), 39995162(c.4884A>G), 39995167(c.4889G>A), 39995200(c.*4922T>C),
Insertions	-1kb 39898813 (c.-2417_-2416insCTTACT), 39899759 (c.-1471_-1470insCT), 5'UTR CDS 3'UTR INTRON 39903386 (c.123+1818dupC), 39904481 (c.123+2923_123+2926dupCATA), 39905936 (c.123+4367dupG), 39908929 (c.123+7355_123+7356insAGTG), 39911139 (c.123+9566dupT), 39912759 (c.123+11185_123+11186insTTGGA), 39913648 (c.123+12075dupT), 39914743 (c.123+13169_123+13170insG), 39918140 (c.123+16566_123+16567insA), 39919698 (c.123+18130_123+18133dupGTCT), 39919848 (c.123+18286dupT), 39927712 (c.123+26140dupA), 39932180 (c.124-29997_124-29996dupTG), 39940310 (c.124-21863dupT), 39942317 (c.124-19860_124-19859insCC), 39942428 (c.124-19745dupT), 39943420 (c.124-18755_124-18754insTCGTC), 39947568 (c.124-14608_124-14607insGCTTTG), 39948674 (c.124-13495dupT), 39952099 (c.124-10079_124-10078insG), 39953713 (c.124-8465_124-8464insGTCCC), 39953724 (c.124-8454_124-8453insACCG), 39953956 (c.124-8226_124-8222dupTCCCC), 39954050 (c.124-8125_124-8123dupAGG), 39954870 (c.124-7308_124-7307insTGG), 39954966 (c.124-7217_124-7212dupGTGTGT), 39955339 (c.124-6836_124-6835insCGCTC), 39956473 (c.124-5704_124-5703insCT), 39959239 (c.124-2938dupC), 39959710 (c.124-2468_124-2467insAC), 39960277 (c.124-1895_124-1894dupAA), 39960380 (c.124-1799_124-1798dupCA), 39960407 (c.124-1770dupT), 39960410 (c.124-1766dupT), 39960632 (c.124-1546_124-1545insCA), 39963640 (c.180+1408_180+1411dupGACT), 39965164 (c.180+2932_180+2933insGTTAT), 39965832 (c.180+3599_180+3602dupGAGC), 39970851 (c.181-3076_181-3075insAG), 39972245 (c.181-1680_181-1679dupCA), 39982378 (c.509-761dupG), 39982401 (c.509-738_509-737insATG), 39987132 (c.949+333dupA), 39987599 (c.949+808dupT), 39988527 (c.950-439_950-438insTCGCTCG), +1kb
Deletions	-1kb 39897404 (c.-3825delT), 39899198 (c.-2031_-2027delGGGGC), 5'UTR CDS 3'UTR INTRON 39901710 (c.123+145delT), 39902458 (c.123+898delA), 39906239 (c.123+4667delA), 39906474 (c.123+4905delA), 39906675 (c.123+5103delC), 39907306 (c.123+5742_123+5745delTGCC), 39907808 (c.123+6246delA), 39908212 (c.123+6644_123+6650delATTCAGC), 39908968 (c.123+7395_123+7399delGAGGG), 39911900 (c.123+10327_123+10331delTTTAA), 39912237 (c.123+10667delT), 39912646 (c.123+11077delT), 39913182 (c.123+11609_123+11610delCA), 39914143 (c.123+12576_123+12577delGT), 39916471 (c.123+14899delC), 39917413 (c.123+15847delT), 39917820 (c.123+16248delT), 39921912 (c.123+20365_123+20366delAC), 39923350 (c.123+21792delC), 39926745 (c.123+25176_123+25179delCTAC), 39928165 (c.123+26592_123+26594delCCC), 39928184 (c.123+26624_123+26625delTT), 39928197 (c.123+26624_123+26625delTT), 39929086 (c.123+27514_123+27515delTG), 39929215 (c.123+27642_123+27644delCTC), 39929256 (c.123+27683_123+27684delGG), 39929794 (c.123+28223delA), 39932999 (c.124-29176delT), 39934766 (c.124-27411_124-27406delGAAGGG), 39934929 (c.124-27245_124-27242delTACT), 39936836 (c.124-25324_124-25320delGTTTT), 39937485 (c.124-24692delT), 39937637 (c.124-24540_124-24534delTGGAGAG), 39940596 (c.124-21561_124-21559delCTC), 39940758 (c.124-21419delA), 39940841 (c.124-21336delT), 39940845 (c.124-21332_124-21325delACTGACTG), 39943372 (c.124-18805delT), 39944716 (c.124-17423_124-17420delGTGT), 39947175 (c.124-14992_124-14990delTTT), 39948070 (c.124-14106_124-14104delACC), 39948825 (c.124-13351_124-13350delAA), 39949818 (c.124-12359delC), 39950959 (c.124-11209delT), 39951200 (c.124-10974_124-10973delAG), 39952450 (c.124-9727_124-9726delGC), 39953178 (c.124-8990_124-8985delGAGGGG), 39956616 (c.124-5551_124-5545delGGTGGGG), 39957241 (c.124-4935delT), 39958018 (c.124-4159_124-4156delGATA), 39958044 (c.124-4133_124-4130delGCGC), 39959230 (c.124-2947delA), 39959999 (c.124-2177_124-2174delACAT), 39960581 (c.124-1591delC), 39960586 (c.124-1591delC), 39960717 (c.124-1456_124-1453delCACT), 39962892 (c.180+660delC), 39964770 (c.180+2542_180+2544delTCT), 39965491 (c.180+3259delT), 39969007 (c.181-4915_181-4913delTTT), 39972122 (c.181-1804delA), 39974842 (c.306+791delG), 39975792 (c.307-914_307-912delGGA), 39984365 (c.694+435delA), 39985351 (c.773+96_773+97delCT), 39986170 (c.774-450_774-448delGTT), +1kb 39990839 (c.562_565delTGTG), 39992504 (c.2227_2233delCACCTGG), 39992802 (c.2525_2526delTA), 39994296 (c.4019_4020delAA),
coding sequence substitutions
premature termination by the nucleotide substitution	0
synonymous num	4
non-synonymous num	0
synonymous substitutions	39962219 (p.Val55Val), 39962225 (p.Asp57Asp), 39980595 (p.His151His), 39986727 (p.Gln292Gln),
non-synonymous substitutions
B6 transcript (ENSMUST00000191761)	MANDSPAKSLVDIDLSSLRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE DEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDDQLWLVMEFCGAGSITDLVKNT KGNTLKEDWIAYISREILRGLAHLHIHHVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDR TVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDLWSCGITAIEMAEGAPPLCDMHPMR ALFLIPRNPPPRLKSKKWSKKFFSFIEGCLVKNYMQRPSTEQLLKHPFIRDQPNERQVRI QLKDHIDRTRKKRGEKDETEYEYSGSEEEEEEVPEQEGEPSSIVNVPGESTLRRDFLRLQ QENKERSEALRRQQLLQEQQLREQEEYKRQLLAERQKRIEQQKE
MSMv4 transcript	MANDSPAKSLVDIDLSSLRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE DEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDDQLWLVMEFCGAGSITDLVKNT KGNTLKEDWIAYISREILRGLAHLHIHHVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDR TVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDLWSCGITAIEMAEGAPPLCDMHPMR ALFLIPRNPPPRLKSKKWSKKFFSFIEGCLVKNYMQRPSTEQLLKHPFIRDQPNERQVRI QLKDHIDRTRKKRGEKDETEYEYSGSEEEEEEVPEQEGEPSSIVNVPGESTLRRDFLRLQ QENKERSEALRRQQLLQEQQLREQEEYKRQLLAERQKRIEQQKE
homology	100.00 (404 / 404)

Exon Detail Report

Target Strain	MSMv4 JF1v3 KJRv1 SWNv1 CHDv1 NJLv1 BLG2v1 HMIv1 BFMv1 PGN2v1

Gene Symbol (Gene ID)	Map4k4 (ENSMUSG00000026074)
Transcript ID	ENSMUST00000191761


..........GTAGTTGAACTGCCTAGCTGACTTGCTGTGGCATGCTGGAAGAAGCCTGT
TTGGTGACCCGTGGTGATCTCCATCCAGGTACTGTCAGGGTTTTAGATCCCGAGCAGAGG
GCTCGCCCGTCCGCCCTCCCTCCCATGGGCCAAACTGGCTCGGGGAACACAGCAGCGAGC
AATCACAGCGACTGTTTTGGATTCTCCCGGACGGTCAAGTGATGCTCAGCGAATCCTCCA
GCAGCAACCAAGCCACAAACTGAGACAGGAAAGGAGAAAGGAGAGGAACACCCCTTGGGG
GGTAAAAAGGAAACGAGGGTCTACGGGACCGACCGGCCGTAGGCGGCGGAGGGGTCCGAG
GCCCGACCCCGGCGCGTCCTGGCACACCCTCTCCCGGGCGAGCGGCGCGGGTGGGGTGTC
CACGGGGCCGCCGGGGCGCTCCGAGTCCTTCATTCATTGTTAGCGGAGGCTGGGGTGTTC
CGCCGCGCCCCGCACTTCCTCCGGGAAGGCCCCGAGGGCTCCCGGCCCCACCCCGGGCCG
GGCCACCATCCGCGGAGGGCCCGCCGCCCGGCCATTGTTCGAGCCCCACCCCTGCTGAAT
ATTCACGCGGGCGGGCGGCGAGCGAGCGAGGGCGAGGGCCGGGTTCCGCCCGCTCTCCCG
GCGGAGGGGGCGGGGGAGTCGCTCGCCCCTCCTCAGCGGCGCCGGTCGGTGCCCCGCGTC
CCCGCCCCCGCCCCCGCCTCCCGCGGCATCTTTGTCTCGCGGCCTCGCGCTCGCTCGCTC
GCCGCGCTCTCCGGCCCCAGCTCCGGGCCGCTCGTGCAGGCGCGCGCGCGCGGGGCGCCG
GGGCCTGAGGCGGCGGGCGACGCCCGGGGGGCGGGTGGGGGCCGAGGGAGGACCGCCAAG
CCATGGTGTGAGCTCCGCGGCCAGCGCTCGCCGCGCCGCGCTCCGCTCCGACCGGACGAC
AAGCCGCCCGGGCGGCGGCGGCCTGCCCGTGCGGCCCGAGCCCCGGCGCC
GCCGAGCCCCTGCCCGTCTCTCGCTCTCTCGCCCGCTCCCGGAGCGGCGACCCGGGGAAGATGGCGAACGACTCTCCCGCGAAGAGCCTGGTGGACATTGACCTGTCGTCCCTGCGG
GTGAGTGCGGCCGCGCCCTGCGCGC..........TAACCTCCCCCTCCTCTCTCTCCAG
GACCCTGCTGGGATTTTTGAGCTGGTGGAAGTGGTTGGAAATGGCACCTATGGACAAGTCTATAAG
GTCGGTGTGGGGCGCCTTTGTTCCC..........CAGTCTTTGTTTTCTGTGTCTCCAG
GGTCGACATGTTAAAACGGGTCAGCTGGCCGCCATCAAGGTCATGGATGTCACCGAG
GTAAGGCTGGACCGCACTTGTTGAT..........CATGTTTTGTTACTTTTTTCCTAAG
GATGAAGAGGAAGAAATCAAACTGGAGATAAATATGCTGAAGAAGTATTCTCATCATCGAAATATTGCCACGTACTATGGTGCTTTCATTAAGAAGAGCCCTCCAGGACATGATGACCAACTCTGG
GTAGGTAGATATGTGCAAGCCTTTG..........ACAACATGTCTTGTCTGCCTTGTAG
CTTGTTATGGAGTTTTGTGGGGCTGGGTCCATCACAGACCTTGTGAAGAACACCAAAGGGAACACTCTCAAAGAAGACTGGATTGCTTACATCTCCAGGGAAATCCTCAGG
GTAAGGAAAGCAGGAGCAACCTGTG..........GACTCAAATCTGCTTTTCTTTTCAG
GGATTGGCACATCTCCATATTCACCACGTTATTCATCGAGATATCAAGGGCCAAAATGTGCTGCTGACCGAGAATGCTGAGGTGAAACTTG
GTAGGTGGCCGGCCGGTGTGTGCCT..........CTTCTTCTTGCTTTTTGTTCCGTAG
TTGATTTTGGTGTAAGCGCTCAGCTGGACAGGACGGTTGGACGGAGAAATACGTTCATAGGCACACCCTACTGGATGGCTCCAGAGGTCATCGCCTGTGATGAGAACCCAGACGCCACTTACGACTACAGA
GTAAGAACACCCACCCCCTTGCCGG..........GGAATATTCTCTTTTGTTTTTGCAG
AGTGACCTCTGGTCCTGTGGCATCACAGCCATCGAGATGGCTGAAGGGGCCCCCC
GTGAGTATCTTCCTTCCTTCTGAGC..........CTGACACCGCCATCTCCTTTCCCAG
CTCTCTGTGACATGCATCCAATGAGAGCGCTGTTTCTCATCCCCAGAAACCCTCCTCCCAGGCTGAAGTCAAAAAAATG
GTAAGCCCCACCTCCCCCTCCCTTC..........CAATATGTTTCACTTTCTCTTAAAG
GTCAAAGAAATTTTTCAGCTTTATAGAAGGCTGTCTGGTGAAGAATTACATGCAGCGGCCCTCTACAGAGCAACTTTTAAAACACCCTTTCATAAGGGATCAACCCAATGAAAGGCAGGTTCGAATCCAGCTTAAGGATCACATAGACCGGACCAGAAAGAAGAGAGGCGAGAAAG
GTATGAAGGCTCCTTTAAGTTTGCC..........TGTTTCTCTCGGCCTTGTTTTTCAG
ATGAGACGGAGTACGAGTACAGCGGGAGCGAGGAGGAGGAGGAGGAAGTGCCTGAGCAGGAGGGAGAGCCAAG
GTACAGACGGCAGCCAGCTCAGGCT..........CCCTGACAGACCCTATCCCCTGCAG
TTCCATCGTCAATGTGCCTGGAGAGTCAACTCTGCGACGTGATTTCCTGAGACTGCAGCAGGAGAACAAGGAGCGGTCTGAGGCTCTGCGGAGACAGCAGCTTCTGCAGGAGCAGCAGCTCCGGGAGCAGGAGGAGTATAAGAGGCAGCTGCTGGCTGAGAGGCAGAAGCGGATTGAACAGCAGAAAGAA
CAGAGGAGGCGGCTGGAAGAGGTAGAAAAGAGAAGTTCTGTGGGTTTTTTCCCTCTTCCT
TACTCATGTTCACATCAGACACCCTGCTAGCTTGTTGAGGAAATAACTATAGGTAGGGAG
GTAGTCTGCCCCTACCCTGCTGCAGCTTCTGTAGGGCTATGTGGCTGTGCACTAGATGGC
TTCACGTTCCTGGAGGATCTGCCAACATTTATGTGCATATCGTGAGGAGCAGGACAGCCC
AAGACATGTTCCCATGTGCTTAAATTGACTCACTTAGACTTGACCTCATTTCTTTGCCAT
TGTTGGCTTTTGTGACCCAGTTTTATATTTTTCTGAAACTTCAGACTTTTTCATATGAAA
AGCATTGTTCTCTAAATGCCTTAGCATTTAAGGTGGATTTAAAATAAAGCATTCAGGCCA
GTGAGATTGCTCAATGGATTAAGATGCTTGCACCCAGCACAGCAACTTGAGTTTGTTACT
GGGTCCCCGATAGTATAGAGAGAGAAAGAATAACTCCAGCAAGTTGTCTCTGACTCCGCT
GTGTGTGTGTTTGTGTGTGTATGTGTGTGTGTGTGTGTGTGTACACGCCCTCACATACAC
GCACGCAATACATTTTTTTAAAGGGGTTCAGAGAGCAGAATAGTAAAGTTACTTGTATTT
TATGGTAGGTATAGTTTGCTCCATTTTCATGAAAGGCATTTATATTATAAACACTGGTGA
TGTAATTATTTATAGGTTATTTGTATTGTAATCACACAAATGTACTATTTCCCTATAATT
CACTTGAGAATCATAACTTTTAATTTTCTTTTCTTGACTGTGTTTTACTTTATATGCCAA
ACCCCCACAACTTCTCATCATTTGATTTGAACATGTGTGTGTTTTTTGTGTTTTTTGTTT
TTTTCTGCTTCTTACTGTTTTTCCTAGTAGAAGAAACGTCAAAGATAAAGCCCTGTAATG
ACATTTCTGGTGGGATTTAGTTAAAATAACTAAGCATGCT..........

No.	Exon / Intron	Start	End	Start Phase	End Phase	Length	Sequence
	5' upstream sequence						..........GTAGTTGAACTGCCTAGCTGACTTGCTGTGGCATGCTGGAAGAAGCCTGT TTGGTGACCCGTGGTGATCTCCATCCAGGTACTGTCAGGGTTTTAGATCCCGAGCAGAGG GCTCGCCCGTCCGCCCTCCCTCCCATGGGCCAAACTGGCTCGGGGAACACAGCAGCGAGC AATCACAGCGACTGTTTTGGATTCTCCCGGACGGTCAAGTGATGCTCAGCGAATCCTCCA GCAGCAACCAAGCCACAAACTGAGACAGGAAAGGAGAAAGGAGAGGAACACCCCTTGGGG GGTAAAAAGGAAACGAGGGTCTACGGGACCGACCGGCCGTAGGCGGCGGAGGGGTCCGAG GCCCGACCCCGGCGCGTCCTGGCACACCCTCTCCCGGGCGAGCGGCGCGGGTGGGGTGTC CACGGGGCCGCCGGGGCGCTCCGAGTCCTTCATTCATTGTTAGCGGAGGCTGGGGTGTTC CGCCGCGCCCCGCACTTCCTCCGGGAAGGCCCCGAGGGCTCCCGGCCCCACCCCGGGCCG GGCCACCATCCGCGGAGGGCCCGCCGCCCGGCCATTGTTCGAGCCCCACCCCTGCTGAAT ATTCACGCGGGCGGGCGGCGAGCGAGCGAGGGCGAGGGCCGGGTTCCGCCCGCTCTCCCG GCGGAGGGGGCGGGGGAGTCGCTCGCCCCTCCTCAGCGGCGCCGGTCGGTGCCCCGCGTC CCCGCCCCCGCCCCCGCCTCCCGCGGCATCTTTGTCTCGCGGCCTCGCGCTCGCTCGCTC GCCGCGCTCTCCGGCCCCAGCTCCGGGCCGCTCGTGCAGGCGCGCGCGCGCGGGGCGCCG GGGCCTGAGGCGGCGGGCGACGCCCGGGGGGCGGGTGGGGGCCGAGGGAGGACCGCCAAG CCATGGTGTGAGCTCCGCGGCCAGCGCTCGCCGCGCCGCGCTCCGCTCCGACCGGACGAC AAGCCGCCCGGGCGGCGGCGGCCTGCCCGTGCGGCCCGAGCCCCGGCGCC
1	EXON 1	39901170	39901286	-	0	117	GCCGAGCCCCTGCCCGTCTCTCGCTCTCTCGCCCGCTCCCGGAGCGGCGACCCGGGGAAG ATGGCGAACGACTCTCCCGCGAAGAGCCTGGTGGACATTGACCTGTCGTCCCTGCGG
	INTRON 1 - 2	39901287	39901508			222	GTGAGTGCGGCCGCGCCCTGCGCGC..........TAACCTCCCCCTCCTCTCTCTCCAG
2	EXON 2	39901509	39901574	0	0	66	GACCCTGCTGGGATTTTTGAGCTGGTGGAAGTGGTTGGAAATGGCACCTATGGACAAGTC TATAAG
	INTRON 2 - 3	39901575	39962177			60603	GTCGGTGTGGGGCGCCTTTGTTCCC..........CAGTCTTTGTTTTCTGTGTCTCCAG
3	EXON 3	39962178	39962234	0	0	57	GGTCGACATGTTAAAACGGGTCAGCTGGCCGCCATCAAGGTCATGGATGTCACCGAG
	INTRON 3 - 4	39962235	39973926			11692	GTAAGGCTGGACCGCACTTGTTGAT..........CATGTTTTGTTACTTTTTTCCTAAG
4	EXON 4	39973927	39974052	0	0	126	GATGAAGAGGAAGAAATCAAACTGGAGATAAATATGCTGAAGAAGTATTCTCATCATCGA AATATTGCCACGTACTATGGTGCTTTCATTAAGAAGAGCCCTCCAGGACATGATGACCAA CTCTGG
	INTRON 4 - 5	39974053	39976706			2654	GTAGGTAGATATGTGCAAGCCTTTG..........ACAACATGTCTTGTCTGCCTTGTAG
5	EXON 5	39976707	39976817	0	0	111	CTTGTTATGGAGTTTTGTGGGGCTGGGTCCATCACAGACCTTGTGAAGAACACCAAAGGG AACACTCTCAAAGAAGACTGGATTGCTTACATCTCCAGGGAAATCCTCAGG
	INTRON 5 - 6	39976818	39980559			3742	GTAAGGAAAGCAGGAGCAACCTGTG..........GACTCAAATCTGCTTTTCTTTTCAG
6	EXON 6	39980560	39980650	0	1	91	GGATTGGCACATCTCCATATTCACCACGTTATTCATCGAGATATCAAGGGCCAAAATGTG CTGCTGACCGAGAATGCTGAGGTGAAACTTG
	INTRON 6 - 7	39980651	39983138			2488	GTAGGTGGCCGGCCGGTGTGTGCCT..........CTTCTTCTTGCTTTTTGTTCCGTAG
7	EXON 7	39983139	39983269	1	0	131	TTGATTTTGGTGTAAGCGCTCAGCTGGACAGGACGGTTGGACGGAGAAATACGTTCATAG GCACACCCTACTGGATGGCTCCAGAGGTCATCGCCTGTGATGAGAACCCAGACGCCACTT ACGACTACAGA
	INTRON 7 - 8	39983270	39983882			613	GTAAGAACACCCACCCCCTTGCCGG..........GGAATATTCTCTTTTGTTTTTGCAG
8	EXON 8	39983883	39983937	0	1	55	AGTGACCTCTGGTCCTGTGGCATCACAGCCATCGAGATGGCTGAAGGGGCCCCCC
	INTRON 8 - 9	39983938	39985181			1244	GTGAGTATCTTCCTTCCTTCTGAGC..........CTGACACCGCCATCTCCTTTCCCAG
9	EXON 9	39985182	39985260	1	2	79	CTCTCTGTGACATGCATCCAATGAGAGCGCTGTTTCTCATCCCCAGAAACCCTCCTCCCA GGCTGAAGTCAAAAAAATG
	INTRON 9 - 10	39985261	39986624			1364	GTAAGCCCCACCTCCCCCTCCCTTC..........CAATATGTTTCACTTTCTCTTAAAG
10	EXON 10	39986625	39986800	2	1	176	GTCAAAGAAATTTTTCAGCTTTATAGAAGGCTGTCTGGTGAAGAATTACATGCAGCGGCC CTCTACAGAGCAACTTTTAAAACACCCTTTCATAAGGGATCAACCCAATGAAAGGCAGGT TCGAATCCAGCTTAAGGATCACATAGACCGGACCAGAAAGAAGAGAGGCGAGAAAG
	INTRON 10 - 11	39986801	39988969			2169	GTATGAAGGCTCCTTTAAGTTTGCC..........TGTTTCTCTCGGCCTTGTTTTTCAG
11	EXON 11	39988970	39989042	1	2	73	ATGAGACGGAGTACGAGTACAGCGGGAGCGAGGAGGAGGAGGAGGAAGTGCCTGAGCAGG AGGGAGAGCCAAG
	INTRON 11 - 12	39989043	39990088			1046	GTACAGACGGCAGCCAGCTCAGGCT..........CCCTGACAGACCCTATCCCCTGCAG
12	EXON 12	39990089	39990278	2	-	190	TTCCATCGTCAATGTGCCTGGAGAGTCAACTCTGCGACGTGATTTCCTGAGACTGCAGCA GGAGAACAAGGAGCGGTCTGAGGCTCTGCGGAGACAGCAGCTTCTGCAGGAGCAGCAGCT CCGGGAGCAGGAGGAGTATAAGAGGCAGCTGCTGGCTGAGAGGCAGAAGCGGATTGAACA GCAGAAAGAA
	3' upstream sequence						CAGAGGAGGCGGCTGGAAGAGGTAGAAAAGAGAAGTTCTGTGGGTTTTTTCCCTCTTCCT TACTCATGTTCACATCAGACACCCTGCTAGCTTGTTGAGGAAATAACTATAGGTAGGGAG GTAGTCTGCCCCTACCCTGCTGCAGCTTCTGTAGGGCTATGTGGCTGTGCACTAGATGGC TTCACGTTCCTGGAGGATCTGCCAACATTTATGTGCATATCGTGAGGAGCAGGACAGCCC AAGACATGTTCCCATGTGCTTAAATTGACTCACTTAGACTTGACCTCATTTCTTTGCCAT TGTTGGCTTTTGTGACCCAGTTTTATATTTTTCTGAAACTTCAGACTTTTTCATATGAAA AGCATTGTTCTCTAAATGCCTTAGCATTTAAGGTGGATTTAAAATAAAGCATTCAGGCCA GTGAGATTGCTCAATGGATTAAGATGCTTGCACCCAGCACAGCAACTTGAGTTTGTTACT GGGTCCCCGATAGTATAGAGAGAGAAAGAATAACTCCAGCAAGTTGTCTCTGACTCCGCT GTGTGTGTGTTTGTGTGTGTATGTGTGTGTGTGTGTGTGTGTACACGCCCTCACATACAC GCACGCAATACATTTTTTTAAAGGGGTTCAGAGAGCAGAATAGTAAAGTTACTTGTATTT TATGGTAGGTATAGTTTGCTCCATTTTCATGAAAGGCATTTATATTATAAACACTGGTGA TGTAATTATTTATAGGTTATTTGTATTGTAATCACACAAATGTACTATTTCCCTATAATT CACTTGAGAATCATAACTTTTAATTTTCTTTTCTTGACTGTGTTTTACTTTATATGCCAA ACCCCCACAACTTCTCATCATTTGATTTGAACATGTGTGTGTTTTTTGTGTTTTTTGTTT TTTTCTGCTTCTTACTGTTTTTCCTAGTAGAAGAAACGTCAAAGATAAAGCCCTGTAATG ACATTTCTGGTGGGATTTAGTTAAAATAACTAAGCATGCT..........

Sequence Detail Report

Gene Symbol (Gene ID)	Map4k4 (ENSMUSG00000026074)
Transcript ID	ENSMUST00000191761

		SNP Information
Strain :
Sequence Retrieve :
Exon translate : CDS Start ( 1 ) - End ( 404 ) -
Strand :	forward reverse
Show sequence :	nucleotide amino acid
Color information