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Target CDS Information

Gene Symbol (Gene ID) Map4k4 (ENSMUSG00000026074)
Cross Reference
EMBL AC132909, AC166238
GO GO:0000165, GO:0004111, GO:0004674, ...show all
goslim_goa GO:0000902, GO:0003674, GO:0005575, ...show all
MGI_trans_name Map4k4-019
OTTP OTTMUSP00000068932
OTTT OTTMUST00000127982
RefSeq_mRNA_predicted XM_006496044.1
RefSeq_peptide_predicted XP_006496107.1
UCSC uc011wjx.1
UniParc UPI0003D76264
Uniprot/SPTREMBL F8VPL5
Vega_transcript Map4k4-019, OTTMUST00000127982
Vega_translation 179105, OTTMUSP00000068932
Definition protein_id:ENSMUSP00000129796
translation:
MANDSPAKSLVDIDLSSLRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE
DEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDDQLWLVMEFCGAGSITDLVKNT
KGNTLKEDWIAYISREILRGLAHLHIHHVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDR
TVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDLWSCGITAIEMAEGAPPLCDMHPMR
ALFLIPRNPPPRLKSKKWSKKFFSFIEGCLVKNYMQRPSTEQLLKHPFIRDQPNERQVRI
QLKDHIDRTRKKRGEKDETEYEYSGSEEEEEEVPEQEGEPSSIVNVPGESTLRRDFLRLQ
QENKERSEALRRQQLLQEQQLREQEEYKRQLLAERQKRIEQQKEQRRRLEEQQRREREAR
RQQEREQRRREQEEKRRLEELERRRKEEEERRRAEEEKRRVEREQEYIRRQLEEEQRHLE
ILQQQLLQEQAMLLECRWREMEEHRQAERLQRQLQQEQAYLLSLQHDHRRPHAQQQPPPP
QQQDRSKPSFHAPEPKPHYDPADRAREVEDRFRKTNHSSPEAQAKQTGRGLEPPVPSRSE
SFSNGNSESVHPALQRPAEPQVPVRTTSRSPVLSRRDSPLQGGGQQNSQAGQRNSTSIEP
RLLWERVEKLVPRPGSGSSSGSSNSGSQPGSHPGSQSGSGERFRVRSSSKSEGSPSPRQE
SAAKKPDDKKEVFRPLKPADLTALAKELRAVEDVRPPHKVTDYSSSSEESGTTDEEEEDV
EQEGADDSTSGPEDTRAASSPNLSNGETESVKTMIVHDDVESEPAMTPSKEGTLIVRQTQ
SASSTLQKHKSSSSFTPFIDPRLLQISPSSGTTVTSVVGFSCDGLRPEAIRQDPTRKGSV
VNVNPTNTRPQSDTPEIRKYKKRFNSEILCAALWGVNLLVGTESGLMLLDRSGQGKVYPL
ISRRRFQQMDVLEGLNVLVTISGKKDKLRVYYLSWLRNKILHNDPEVEKKQGWTTVGDLE
GCVHYKVVKYERIKFLVIALKSSVEVYAWAPKPYHKFMAFKSFGELLHKPLLVDLTVEEG
QRLKVIYGSCAGFHAVDVDSGSVYDIYLPTHIQCSIKPHAIIILPNTDGMELLVCYEDEG
VYVNTYGRITKDVVLQWGEMPTSVAYIRSNQTMGWGEKAIEIRSVETGHLDGVFMHKRAQ
RLKFLCERNDKVFFASVRSGGSSQVYFMTLGRTSLLSW

Chromosome 1
Length
Position(start - end)
123,481
39,901,230 - 40,024,712
Orient to Chromosome plus
Link Location : (1:39901230-40024712)
/

Detail Map


 

Report

Polymorphisms Report

Target Strain  MSMv4  JF1v3  KJRv1  SWNv1  CHDv1  NJLv1  BLG2v1  HMIv1  BFMv1  PGN2v1
Gene Symbol (Gene ID) Map4k4 (ENSMUSG00000026074)
Transcript ID ENSMUST00000168431
Reports
substitution
cSNPs9
Insertion81
Deletion120
SNPs
-1kb
5'UTR
CDS
3'UTR
INTRON
+1kb
Insertions
-1kb
5'UTR
CDS
3'UTR
INTRON
+1kb
Deletions
-1kb
5'UTR
CDS
3'UTR
INTRON
+1kb
coding sequence substitutions
premature termination by the nucleotide substitution0
synonymous num9
non-synonymous num0
synonymous substitutions 39962219 (p.Val55Val), 39962225 (p.Asp57Asp), 39980595 (p.His151His), 39986727 (p.Gln292Gln), 40004869 (p.Gly642Gly), 40009813 (p.Glu781Glu), 40017165 (p.Gly953Gly), 40022800 (p.Phe1093Phe), 40022854 (p.His1111His),
non-synonymous substitutions
B6 transcript
(ENSMUST00000168431)
MANDSPAKSLVDIDLSSLRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE
DEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDDQLWLVMEFCGAGSITDLVKNT
KGNTLKEDWIAYISREILRGLAHLHIHHVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDR
TVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDLWSCGITAIEMAEGAPPLCDMHPMR
ALFLIPRNPPPRLKSKKWSKKFFSFIEGCLVKNYMQRPSTEQLLKHPFIRDQPNERQVRI
QLKDHIDRTRKKRGEKDETEYEYSGSEEEEEEVPEQEGEPSSIVNVPGESTLRRDFLRLQ
QENKERSEALRRQQLLQEQQLREQEEYKRQLLAERQKRIEQQKEQRRRLEEQQRREREAR
RQQEREQRRREQEEKRRLEELERRRKEEEERRRAEEEKRRVEREQEYIRRQLEEEQRHLE
ILQQQLLQEQAMLLECRWREMEEHRQAERLQRQLQQEQAYLLSLQHDHRRPHAQQQPPPP
QQQDRSKPSFHAPEPKPHYDPADRAREVEDRFRKTNHSSPEAQAKQTGRGLEPPVPSRSE
SFSNGNSESVHPALQRPAEPQVPVRTTSRSPVLSRRDSPLQGGGQQNSQAGQRNSTSIEP
RLLWERVEKLVPRPGSGSSSGSSNSGSQPGSHPGSQSGSGERFRVRSSSKSEGSPSPRQE
SAAKKPDDKKEVFRPLKPADLTALAKELRAVEDVRPPHKVTDYSSSSEESGTTDEEEEDV
EQEGADDSTSGPEDTRAASSPNLSNGETESVKTMIVHDDVESEPAMTPSKEGTLIVRQTQ
SASSTLQKHKSSSSFTPFIDPRLLQISPSSGTTVTSVVGFSCDGLRPEAIRQDPTRKGSV
VNVNPTNTRPQSDTPEIRKYKKRFNSEILCAALWGVNLLVGTESGLMLLDRSGQGKVYPL
ISRRRFQQMDVLEGLNVLVTISGKKDKLRVYYLSWLRNKILHNDPEVEKKQGWTTVGDLE
GCVHYKVVKYERIKFLVIALKSSVEVYAWAPKPYHKFMAFKSFGELLHKPLLVDLTVEEG
QRLKVIYGSCAGFHAVDVDSGSVYDIYLPTHIQCSIKPHAIIILPNTDGMELLVCYEDEG
VYVNTYGRITKDVVLQWGEMPTSVAYIRSNQTMGWGEKAIEIRSVETGHLDGVFMHKRAQ
RLKFLCERNDKVFFASVRSGGSSQVYFMTLGRTSLLSW*
MSMv4 transcript
MANDSPAKSLVDIDLSSLRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE
DEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDDQLWLVMEFCGAGSITDLVKNT
KGNTLKEDWIAYISREILRGLAHLHIHHVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDR
TVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDLWSCGITAIEMAEGAPPLCDMHPMR
ALFLIPRNPPPRLKSKKWSKKFFSFIEGCLVKNYMQRPSTEQLLKHPFIRDQPNERQVRI
QLKDHIDRTRKKRGEKDETEYEYSGSEEEEEEVPEQEGEPSSIVNVPGESTLRRDFLRLQ
QENKERSEALRRQQLLQEQQLREQEEYKRQLLAERQKRIEQQKEQRRRLEEQQRREREAR
RQQEREQRRREQEEKRRLEELERRRKEEEERRRAEEEKRRVEREQEYIRRQLEEEQRHLE
ILQQQLLQEQAMLLECRWREMEEHRQAERLQRQLQQEQAYLLSLQHDHRRPHAQQQPPPP
QQQDRSKPSFHAPEPKPHYDPADRAREVEDRFRKTNHSSPEAQAKQTGRGLEPPVPSRSE
SFSNGNSESVHPALQRPAEPQVPVRTTSRSPVLSRRDSPLQGGGQQNSQAGQRNSTSIEP
RLLWERVEKLVPRPGSGSSSGSSNSGSQPGSHPGSQSGSGERFRVRSSSKSEGSPSPRQE
SAAKKPDDKKEVFRPLKPADLTALAKELRAVEDVRPPHKVTDYSSSSEESGTTDEEEEDV
EQEGADDSTSGPEDTRAASSPNLSNGETESVKTMIVHDDVESEPAMTPSKEGTLIVRQTQ
SASSTLQKHKSSSSFTPFIDPRLLQISPSSGTTVTSVVGFSCDGLRPEAIRQDPTRKGSV
VNVNPTNTRPQSDTPEIRKYKKRFNSEILCAALWGVNLLVGTESGLMLLDRSGQGKVYPL
ISRRRFQQMDVLEGLNVLVTISGKKDKLRVYYLSWLRNKILHNDPEVEKKQGWTTVGDLE
GCVHYKVVKYERIKFLVIALKSSVEVYAWAPKPYHKFMAFKSFGELLHKPLLVDLTVEEG
QRLKVIYGSCAGFHAVDVDSGSVYDIYLPTHIQCSIKPHAIIILPNTDGMELLVCYEDEG
VYVNTYGRITKDVVLQWGEMPTSVAYIRSNQTMGWGEKAIEIRSVETGHLDGVFMHKRAQ
RLKFLCERNDKVFFASVRSGGSSQVYFMTLGRTSLLSW*
homology100.00 (1239 / 1239)

Exon Detail Report

Target Strain  MSMv4  JF1v3  KJRv1  SWNv1  CHDv1  NJLv1  BLG2v1  HMIv1  BFMv1  PGN2v1
Gene Symbol (Gene ID) Map4k4 (ENSMUSG00000026074)
Transcript ID ENSMUST00000168431
No. Exon / Intron Start End Start Phase End Phase Length Sequence
5' upstream sequence
..........AGGGAGGTGCAGAACGTTATTGACAACTAGATGCCCATGAAACAGTGGAT
TTTGGGGGGTGCCATGTAACACCAAGCTTAGCTTCATCTGTTAACTTATCAGGCCTATTC
TAGGCCTTCTACATGTGGGAGTCAAGCAATTTTACAGCGATCTTGTACCTGGCCATTCTG
GGATACTGTTGAGAACACCCGCTGTGAGGTAACAGGGAGTCACTAAACATGTTTTTGGCT
GGTCCTGGGACGTGATAAAGAGGGACAGTAGTTGAACTGCCTAGCTGACTTGCTGTGGCA
TGCTGGAAGAAGCCTGTTTGGTGACCCGTGGTGATCTCCATCCAGGTACTGTCAGGGTTT
TAGATCCCGAGCAGAGGGCTCGCCCGTCCGCCCTCCCTCCCATGGGCCAAACTGGCTCGG
GGAACACAGCAGCGAGCAATCACAGCGACTGTTTTGGATTCTCCCGGACGGTCAAGTGAT
GCTCAGCGAATCCTCCAGCAGCAACCAAGCCACAAACTGAGACAGGAAAGGAGAAAGGAG
AGGAACACCCCTTGGGGGGTAAAAAGGAAACGAGGGTCTACGGGACCGACCGGCCGTAGG
CGGCGGAGGGGTCCGAGGCCCGACCCCGGCGCGTCCTGGCACACCCTCTCCCGGGCGAGC
GGCGCGGGTGGGGTGTCCACGGGGCCGCCGGGGCGCTCCGAGTCCTTCATTCATTGTTAG
CGGAGGCTGGGGTGTTCCGCCGCGCCCCGCACTTCCTCCGGGAAGGCCCCGAGGGCTCCC
GGCCCCACCCCGGGCCGGGCCACCATCCGCGGAGGGCCCGCCGCCCGGCCATTGTTCGAG
CCCCACCCCTGCTGAATATTCACGCGGGCGGGCGGCGAGCGAGCGAGGGCGAGGGCCGGG
TTCCGCCCGCTCTCCCGGCGGAGGGGGCGGGGGAGTCGCTCGCCCCTCCTCAGCGGCGCC
GGTCGGTGCCCCGCGTCCCCGCCCCCGCCCCCGCCTCCCGCGGCATCTTT
1 EXON 1 39,900,913 39,901,286 - 0 374
GTCTCGCGGCCTCGCGCTCGCTCGCTCGCCGCGCTCTCCGGCCCCAGCTCCGGGCCGCTC
GTGCAGGCGCGCGCGCGCGGGGCGCCGGGGCCTGAGGCGGCGGGCGACGCCCGGGGGGCG
GGTGGGGGCCGAGGGAGGACCGCCAAGCCATGGTGTGAGCTCCGCGGCCAGCGCTCGCCG
CGCCGCGCTCCGCTCCGACCGGACGACAAGCCGCCCGGGCGGCGGCGGCCTGCCCGTGCG
GCCCGAGCCCCGGCGCCGCCGAGCCCCTGCCCGTCTCTCGCTCTCTCGCCCGCTCCCGGA
GCGGCGACCCGGGGAAGATGGCGAACGACTCTCCCGCGAAGAGCCTGGTGGACATTGACC
TGTCGTCCCTGCGG
INTRON 1 - 2 39,901,287 39,901,508 222
GTGAGTGCGGCCGCGCCCTGCGCGC..........TAACCTCCCCCTCCTCTCTCTCCAG
2 EXON 2 39,901,509 39,901,574 0 0 66
GACCCTGCTGGGATTTTTGAGCTGGTGGAAGTGGTTGGAAATGGCACCTATGGACAAGTC
TATAAG
INTRON 2 - 3 39,901,575 39,962,177 60,603
GTCGGTGTGGGGCGCCTTTGTTCCC..........CAGTCTTTGTTTTCTGTGTCTCCAG
3 EXON 3 39,962,178 39,962,234 0 0 57
GGTCGACATGTTAAAACGGGTCAGCTGGCCGCCATCAAGGTCATGGATGTCACCGAG
INTRON 3 - 4 39,962,235 39,973,926 11,692
GTAAGGCTGGACCGCACTTGTTGAT..........CATGTTTTGTTACTTTTTTCCTAAG
4 EXON 4 39,973,927 39,974,052 0 0 126
GATGAAGAGGAAGAAATCAAACTGGAGATAAATATGCTGAAGAAGTATTCTCATCATCGA
AATATTGCCACGTACTATGGTGCTTTCATTAAGAAGAGCCCTCCAGGACATGATGACCAA
CTCTGG
INTRON 4 - 5 39,974,053 39,976,706 2,654
GTAGGTAGATATGTGCAAGCCTTTG..........ACAACATGTCTTGTCTGCCTTGTAG
5 EXON 5 39,976,707 39,976,817 0 0 111
CTTGTTATGGAGTTTTGTGGGGCTGGGTCCATCACAGACCTTGTGAAGAACACCAAAGGG
AACACTCTCAAAGAAGACTGGATTGCTTACATCTCCAGGGAAATCCTCAGG
INTRON 5 - 6 39,976,818 39,980,559 3,742
GTAAGGAAAGCAGGAGCAACCTGTG..........GACTCAAATCTGCTTTTCTTTTCAG
6 EXON 6 39,980,560 39,980,650 0 1 91
GGATTGGCACATCTCCATATTCACCACGTTATTCATCGAGATATCAAGGGCCAAAATGTG
CTGCTGACCGAGAATGCTGAGGTGAAACTTG
INTRON 6 - 7 39,980,651 39,983,138 2,488
GTAGGTGGCCGGCCGGTGTGTGCCT..........CTTCTTCTTGCTTTTTGTTCCGTAG
7 EXON 7 39,983,139 39,983,269 1 0 131
TTGATTTTGGTGTAAGCGCTCAGCTGGACAGGACGGTTGGACGGAGAAATACGTTCATAG
GCACACCCTACTGGATGGCTCCAGAGGTCATCGCCTGTGATGAGAACCCAGACGCCACTT
ACGACTACAGA
INTRON 7 - 8 39,983,270 39,983,882 613
GTAAGAACACCCACCCCCTTGCCGG..........GGAATATTCTCTTTTGTTTTTGCAG
8 EXON 8 39,983,883 39,983,937 0 1 55
AGTGACCTCTGGTCCTGTGGCATCACAGCCATCGAGATGGCTGAAGGGGCCCCCC
INTRON 8 - 9 39,983,938 39,985,181 1,244
GTGAGTATCTTCCTTCCTTCTGAGC..........CTGACACCGCCATCTCCTTTCCCAG
9 EXON 9 39,985,182 39,985,260 1 2 79
CTCTCTGTGACATGCATCCAATGAGAGCGCTGTTTCTCATCCCCAGAAACCCTCCTCCCA
GGCTGAAGTCAAAAAAATG
INTRON 9 - 10 39,985,261 39,986,624 1,364
GTAAGCCCCACCTCCCCCTCCCTTC..........CAATATGTTTCACTTTCTCTTAAAG
10 EXON 10 39,986,625 39,986,800 2 1 176
GTCAAAGAAATTTTTCAGCTTTATAGAAGGCTGTCTGGTGAAGAATTACATGCAGCGGCC
CTCTACAGAGCAACTTTTAAAACACCCTTTCATAAGGGATCAACCCAATGAAAGGCAGGT
TCGAATCCAGCTTAAGGATCACATAGACCGGACCAGAAAGAAGAGAGGCGAGAAAG
INTRON 10 - 11 39,986,801 39,988,969 2,169
GTATGAAGGCTCCTTTAAGTTTGCC..........TGTTTCTCTCGGCCTTGTTTTTCAG
11 EXON 11 39,988,970 39,989,042 1 2 73
ATGAGACGGAGTACGAGTACAGCGGGAGCGAGGAGGAGGAGGAGGAAGTGCCTGAGCAGG
AGGGAGAGCCAAG
INTRON 11 - 12 39,989,043 39,990,088 1,046
GTACAGACGGCAGCCAGCTCAGGCT..........CCCTGACAGACCCTATCCCCTGCAG
12 EXON 12 39,990,089 39,990,299 2 0 211
TTCCATCGTCAATGTGCCTGGAGAGTCAACTCTGCGACGTGATTTCCTGAGACTGCAGCA
GGAGAACAAGGAGCGGTCTGAGGCTCTGCGGAGACAGCAGCTTCTGCAGGAGCAGCAGCT
CCGGGAGCAGGAGGAGTATAAGAGGCAGCTGCTGGCTGAGAGGCAGAAGCGGATTGAACA
GCAGAAAGAACAGAGGAGGCGGCTGGAAGAG
INTRON 12 - 13 39,990,300 39,997,020 6,721
GTAGAAAAGAGAAGTTCTGTGGGTT..........TAACTACACAGTTCTCCTTCTGCAG
13 EXON 13 39,997,021 39,997,182 0 0 162
CAACAAAGAAGAGAACGGGAAGCCAGGAGGCAGCAGGAGCGTGAGCAGCGGCGGCGTGAA
CAAGAGGAGAAGAGGCGTCTCGAGGAACTGGAAAGGCGGCGTAAAGAAGAGGAAGAGAGG
AGACGGGCAGAAGAGGAGAAGAGGAGAGTGGAGAGGGAACAG
INTRON 13 - 14 39,997,183 39,999,887 2,705
GTGAGCTTTCAAGAATGTTGACCCA..........CTGCTGGGTCATTTCTGTGTGACAG
14 EXON 14 39,999,888 39,999,974 0 0 87
GAGTACATCAGGCGGCAGCTAGAGGAGGAGCAGCGGCACCTGGAGATCCTGCAGCAGCAG
CTGCTCCAGGAGCAGGCCATGTTACTG
INTRON 14 - 15 39,999,975 40,000,530 556
GTAACGCCCCGTCTCTGTCCCGTTC..........CAGTGTCACCCTCTCCCTCTCCAAG
15 EXON 15 40,000,531 40,000,749 0 0 219
GAGTGCCGATGGCGGGAGATGGAGGAGCACCGGCAGGCAGAGAGGCTCCAGAGGCAGTTG
CAACAAGAACAAGCATATCTCCTGTCTCTACAGCACGACCACAGGAGGCCGCACGCACAG
CAGCAGCCGCCGCCCCCGCAGCAGCAGGACAGGAGCAAACCGAGCTTTCATGCTCCAGAG
CCCAAGCCTCACTATGACCCTGCTGACAGAGCTCGGGAG
INTRON 15 - 16 40,000,750 40,001,429 680
GTACCTGCTTTCCCTCTTGCTTACA..........CGTGTCTTCTAATTCTCTGACGCAG
16 EXON 16 40,001,430 40,001,591 0 0 162
GTGGAAGATAGATTTAGAAAGACTAACCACAGCTCCCCTGAGGCCCAGGCTAAGCAAACG
GGCAGAGGACTGGAGCCACCCGTGCCTTCCCGGTCAGAGTCTTTTTCCAATGGCAACTCC
GAGTCTGTGCACCCTGCCCTGCAGAGACCAGCGGAGCCACAG
INTRON 16 - 17 40,001,592 40,004,806 3,215
GTAGCAGCAGTAGCTCCCTGTGCCA..........TAACTGCTGTGTTTCCTACCTAAAG
17 EXON 17 40,004,807 40,004,913 0 2 107
GTTCCCGTGAGAACGACCTCTCGTTCCCCTGTCCTCTCCCGTCGGGATTCCCCACTGCAG
GGTGGTGGACAGCAGAATAGCCAAGCAGGACAGAGAAATTCCACCAG
INTRON 17 - 18 40,004,914 40,006,673 1,760
GTAAAAAAAGAGAACTGACAGGAGG..........CCGTTCTCTCCTTTTCTAACAGCAG
18 EXON 18 40,006,674 40,006,822 2 1 149
TATTGAGCCCCGGCTTCTTTGGGAGAGAGTGGAAAAGCTGGTCCCCAGGCCAGGCAGTGG
CAGCTCTTCAGGGTCCAGCAACTCAGGATCCCAGCCTGGCTCCCATCCTGGGTCTCAGAG
CGGCTCCGGTGAACGCTTCAGAGTGAGAT
INTRON 18 - 19 40,006,823 40,007,432 610
GTAGGCTATCTCTCCTACACACTTT..........TTTTTGTCTCTCCTGAACGTACCAG
19 EXON 19 40,007,433 40,007,530 1 0 98
CATCATCCAAGTCTGAAGGTTCTCCATCGCCACGCCAGGAAAGTGCAGCCAAAAAGCCTG
ACGATAAGAAAGAAGTATTCCGGCCTCTCAAGCCTGCG
INTRON 19 - 20 40,007,531 40,009,687 2,157
GTAAGTACTGTGTAAAATCACTTAG..........CTTCCTTTTCCTTCCTGTGTCTTAG
20 EXON 20 40,009,688 40,009,863 0 2 176
GACTTGACTGCGTTGGCCAAAGAGCTTCGAGCAGTGGAAGATGTTCGGCCACCTCACAAA
GTAACAGACTACTCATCCTCCAGTGAGGAGTCTGGGACCACAGATGAGGAGGAGGAGGAC
GTGGAGCAGGAGGGGGCTGATGATTCTACCTCGGGACCAGAAGACACCAGAGCAGC
INTRON 20 - 21 40,009,864 40,010,556 693
GTTAGTGCTTGCTGGGCTCAAGAGA..........TGACTTGCAGATCTTGTCTCTTCAG
21 EXON 21 40,010,557 40,010,677 2 0 121
GTCATCTCCGAACCTGAGCAACGGTGAAACAGAATCTGTGAAAACAATGATCGTTCATGA
TGATGTAGAAAGTGAGCCAGCCATGACCCCGTCCAAGGAGGGCACCCTCATCGTCCGCCA
G
INTRON 21 - 22 40,010,678 40,014,105 3,428
GTACCGGAGCCTCCTCTCCTGTTGT..........AATGAAATTGAAATTTACATTTCAG
22 EXON 22 40,014,106 40,014,223 0 1 118
ACTCAGTCCGCTAGTAGCACACTCCAGAAACACAAATCTTCCTCCTCCTTTACACCTTTT
ATAGACCCCAGGTTACTACAGATCTCTCCATCTAGTGGGACGACAGTGACTTCCGTGG
INTRON 22 - 23 40,014,224 40,014,526 303
GTAAGTACAGCAGCGCCAAGGAGAG..........GAGTCTTCACTGCACTGTGTTTCAG
23 EXON 23 40,014,527 40,014,697 1 1 171
TGGGATTTTCCTGTGATGGGCTGAGACCAGAAGCCATAAGGCAAGATCCTACTCGGAAAG
GCTCAGTGGTCAATGTGAACCCCACGAACACTAGGCCACAGAGTGATACCCCCGAGATTC
GTAAATACAAGAAGAGATTTAACTCAGAGATCCTGTGTGCTGCCTTATGGG
INTRON 23 - 24 40,014,698 40,017,109 2,412
GTAGGTACCTCACTGCTGTCGGGTG..........TAGGCCTTTCTGTGTTTTTGAACAG
24 EXON 24 40,017,110 40,017,253 1 1 144
GAGTGAACTTGCTGGTTGGTACAGAGAGCGGTCTGATGCTCTTGGACAGAAGTGGTCAAG
GGAAAGTATACCCTCTGATCAGCCGAAGACGGTTCCAGCAAATGGATGTGCTCGAAGGCC
TAAATGTCCTGGTGACAATATCTG
INTRON 24 - 25 40,017,254 40,019,543 2,290
GTGAGTGTTCTTTAAAGCAGAATCA..........AAAATACTTCTGTTTATCTTGTTAG
25 EXON 25 40,019,544 40,019,678 1 1 135
GCAAAAAGGATAAGTTACGTGTCTACTATTTATCCTGGCTAAGAAATAAGATTCTTCATA
ATGATCCAGAGGTTGAGAAGAAGCAGGGGTGGACCACTGTGGGCGACTTGGAAGGGTGCG
TGCACTATAAAGTCG
INTRON 25 - 26 40,019,679 40,021,083 1,405
GTGAGTGCTCCGGGGGGCCTTGCTC..........CTCTTGCTTTTTATGTTTGTTTCAG
26 EXON 26 40,021,084 40,021,184 1 0 101
TAAAATATGAAAGAATCAAGTTTCTGGTAATTGCTTTGAAGAGTTCTGTGGAAGTCTATG
CATGGGCACCGAAGCCATATCACAAATTTATGGCCTTTAAG
INTRON 26 - 27 40,021,185 40,022,704 1,520
GTAAAACTGCCAGTTTTAAGTTGGC..........GCTTCTGTCTTGATTCCCTCTGTAG
27 EXON 27 40,022,705 40,022,854 0 0 150
TCATTTGGAGAACTGCTACATAAGCCATTACTGGTGGATCTCACTGTGGAGGAAGGCCAG
AGGTTGAAAGTGATCTATGGATCCTGTGCGGGATTTCATGCTGTTGATGTGGATTCAGGC
TCAGTCTATGACATTTATCTACCAACACAC
INTRON 27 - 28 40,022,855 40,023,359 505
GTAAGAAAGAACCCACACTCTATGG..........CTGCTTCCCTGTTCCTGTTCTCTAG
28 EXON 28 40,023,360 40,023,519 0 1 160
ATTCAGTGTAGCATCAAACCCCATGCAATCATTATCCTCCCCAACACGGATGGGATGGAG
CTGCTGGTGTGCTACGAAGACGAGGGGGTTTACGTTAACACGTACGGAAGGATCACCAAG
GACGTGGTTCTGCAGTGGGGAGAGATGCCGACATCTGTAG
INTRON 28 - 29 40,023,520 40,024,309 790
GTATGACACGTCGTGACGAGGCTTC..........CTCTCTCTCTCTCTCTCTCTCAAAG
29 EXON 29 40,024,310 40,024,449 1 0 140
CATATATCCGGTCGAATCAGACAATGGGCTGGGGAGAGAAGGCAATAGAGATACGATCTG
TGGAAACTGGTCACTTGGATGGTGTATTTATGCACAAAAGGGCTCAGAGACTAAAGTTCC
TGTGTGAACGCAATGACAAG
INTRON 29 - 30 40,024,450 40,024,628 179
GTAAAGCTCCCTTATGGCGTCTGGG..........ACTGTGTCCTCTCATTGTGTTGCAG
30 EXON 30 40,024,629 40,026,310 0 - 1,682
GTGTTCTTTGCCTCCGTCCGCTCTGGTGGCAGCAGCCAGGTCTATTTCATGACCTTAGGC
AGGACTTCTCTTCTGAGCTGGTAGAGGCAGTGTGAGCTGGGATCACTGACCTCTGGAGTC
GGCAAGACCCTGAGCGAGACCTTGGAATTCCTTGCAACTGGAGCTCAGAGCTGTGCTGGT
GCAGCCAGGACAGCTGTCTGCAGGCCACCTGCGCGTCGCATCGGGTCGGGTCGGGCCCTC
TCCCCTCCCTCCTACACTTTTTGCCAGTTTATTCCCATTCTCTCCTTTTCCTTTCTCAAA
TAAATCAAGGCTGCGTTGCAGCTGGTGCTGTCTGGACTCCACCATCGGTGCTAGGAGTGC
TTGGGAATGGACTCAGACCGGGAAGGAAGAGCGAGCGAGCAAGCGCTGCGCCTTCCCTGC
AGCTCCAGGAGGCCGTCTCCGAGCGAGCGAGCGAGCGAGCGACTGTCCTATGGGTGTCTG
AAGGGTGTGATGAGCGCACCGTCAGACTTTGGCAGTGGGCACAAAGAAGTGAAAAGTGGG
CGTAAGAAGCAGCTTGCAGAAGCAGAGAACAGATTTAATATAGTAACATTAACAATGTAT
TTAATTGACATTTCTCTTTTTGTAATGTGACAGTATGTGGACAGAGAAGAAGGTGCAGGT
TTAAGAAGTTAATATTTATAAAATGTGAAAGACACAGTTACTAGGATACCTTTTTTTTGT
GGGTGGGGCTTAGGGTGGGGTGGGGTGGGTTAAAGGGTCCCATTTTGTTTCTTTGAAAGT
TTTTTGGAGGGGGTTGTCCTGGCCAAGAACTCAGTCATTTTTCTGTGTACCAAGTTTTGC
CTAAATTGTGCAGGTGGTTCTTAAAAAAGAAAGAAAAGGAAAAGAAAAGTGTGTGTCTTG
TTGGAGGGCCAGAAGTTTGTCCTGTGACAGTATTAGCCCGGCCTCGGCTACAGGTTTAAA
GTCTGTTAGGCCTAAGTGCAGCTCCCCGTGGCCTGCACACACCGTAGGAGAAGGTCAGCT
TTCCTGTGGGGTTTTGTTTCATTTTGTTTTGTTTTTTGCCTACCTCACTGTTTTTAATGC
ATTGAGAGGTGACTTAGTTTATGGTTTTGGCAGAAAACATTAATGTTTAATTTAACCTTA
ATACCAAAACTATCTGATTAAAGTTTGACTTTGTCACAAGTCTAAATCAGGTACAAAAAA
GGAAAAAAACAAAAAATAAAAAACAAGCCTGTCTATGACAGCAGGGAGTAGCCTTGTAGC
TGCTGCAGTCTGCTTCTAGCATGCAGACTGCTCTGTTCTCACCAAGTTCACCATTAGCGG
GTGACAGGCAGCCAGCTGCCACCTGTGACACACAAGAGATGTCATTGTTCTCAGTTGGGT
TTGGAAGCAGGCAGGGGTCACACTGGGGAGTCACACAGACCGTTGATGTTGCAGGAGCCT
TTCTTGGGAGTGACGGTGTGTCCCTTTTCTAAGAATGCAATGCACTAAAACTGTTTTAAG
AATGTAGTTTGCCCTACTTCTTCATAGATGGCCCCTCCCTGCCTGTGTTTCAGGTGTAAA
ATCGACACTCTGGCTTTTCTCCTTTTCTCACGTGCTCTCTTGTTCTCTTTTTTTAAAACT
AATTTTTCTTTATGAATATGTCTGTGACATTTGTAATAAATGTCTTGTAATAATTTGCTT
CA
3' upstream sequence
TGGCTTCATGGTCATCACTACATTCTCTGAGGATGCTAGTGTCTCAGTGAAGAGGCAGCG
CTGAGCCACACCCTGCCATCTTGCTCTGAATGGGAAAGCCTTGTGACAGCTTCTGTGTGC
TTCATTCCCCAAACACAAGCTCGGGGTTTCAGGGGCTGGATCTTCCTTTGTGGTTAATTC
CTTTTACAGCATGCTTCATCAATCCCTGTCCCATGTAACAGTCATCCGTACCTACTGCCA
AGCCTGTACCATCGGCCTCAGTTCACACAGCTGTCAGTCATTCGCTTCTGTTTAATGAAC
AACAAAAATCTAGTGAAAAACACAATATACTACTGCAGTTAAATGGTTGGTTGTTAATAC
CAACAAAGATAGGTCAGGATAAGCGAGCGACCCTTATTCCTTTTAGGGGAAAAGGAAGCA
AAAGGCTGTATGACTTCAGAGTAATGAAAAAACTGTTTCTCTTCTGGTTTGTGGCTAACC
TAGAGTAGGTTAAAGAGTTATCCCATGTGAGACTTGGACTATCCCATCAGCAAAGGACTC
AGTCAGAGTCTAATGGTGGCAGCCTCCTACCCACACTTGGGGTTTTTATAAAATGAGAGG
GACCTGCAAGGCAAGGCAAGTGCATGGATCAAGAGGAGACAGAGCTGTCTGTGTGATTCC
AGCTGTCTCCCTGACTTAAGAGTGCCGTGAAATGCAAGCCAACAGCTCTGGAGAAACATC
AAGCTACAGGCACAAAGAAGCATGAAGAACCAGGAGGCTGCTGTCCACCTTACTCCTGTG
TGTCAGAGTCTGTCAGCCAAAGGCTGCAATTAGTACAAACATACATCGTTGGGACTGTTA
ATAGCTAGAACTTTCCCTTAGGGAGCTGTGGGCGGAGGATGGACTTGGTCATCTGCGCCT
ATGCTGCTTGCCCTGCCCTGTCAGCCCATAAGCATTCACCTAGTTGACCCAGACCAACTC
CATGGCCGGCTGAAGGAGAACAGTCCTCCCCCCAAGCCCC..........

Sequence Detail Report

Gene Symbol (Gene ID) Map4k4 (ENSMUSG00000026074)
Transcript ID ENSMUST00000168431
SNP Information
Strain :
Sequence Retrieve :
Exon translate :
CDS Start ( 1 ) - End ( 1239 )
-
Strand : forward reverse
Show sequence : nucleotide amino acid
Color information