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Target CDS Information

Gene Symbol (Gene ID) Map4k4 (ENSMUSG00000026074)
Cross Reference
EMBL AC132909, AC166238
GO GO:0000165, GO:0004111, GO:0004674, ...show all
goslim_goa GO:0000902, GO:0003674, GO:0005575, ...show all
MGI_trans_name Map4k4-004
OTTP OTTMUSP00000068928
OTTT OTTMUST00000127976
RefSeq_mRNA NM_001252200.1
RefSeq_peptide NP_001239129
RefSeq_peptide_predicted XP_011236832.1
UCSC uc011wjv.1
UniParc UPI0001F7959B
Uniprot/SPTREMBL A0A0A6YW53
Vega_transcript Map4k4-004, OTTMUST00000127976
Vega_translation 179108, OTTMUSP00000068928
Definition protein_id:ENSMUSP00000141400
translation:
MANDSPAKSLVDIDLSSLRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE
DEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDDQLWLVMEFCGAGSITDLVKNT
KGNTLKEDWIAYISREILRGLAHLHIHHVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDR
TVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDLWSCGITAIEMAEGAPPLCDMHPMR
ALFLIPRNPPPRLKSKKWSKKFFSFIEGCLVKNYMQRPSTEQLLKHPFIRDQPNERQVRI
QLKDHIDRTRKKRGEKDETEYEYSGSEEEEEEVPEQEGEPSSIVNVPGESTLRRDFLRLQ
QENKERSEALRRQQLLQEQQLREQEEYKRQLLAERQKRIEQQKEQRRRLEEQQRREREAR
RQQEREQRRREQEEKRRLEELERRRKEEEERRRAEEEKRRVEREQEYIRRQLEEEQRHLE
ILQQQLLQEQAMLLHDHRRPHAQQQPPPPQQQDRSKPSFHAPEPKPHYDPADRAREVEDR
FRKTNHSSPEAQAKQTGRGLEPPVPSRSESFSNGNSESVHPALQRPAEPQVQWSHLASLK
NNVSPVSRSHSFSDPSPKFAHHHLRSQDPCPPSRSEGLSQSSDSKSEVPEPTQKAWSRSD
SDEVPPRVPVRTTSRSPVLSRRDSPLQGGGQQNSQAGQRNSTSSIEPRLLWERVEKLVPR
PGSGSSSGSSNSGSQPGSHPGSQSGSGERFRVRSSSKSEGSPSPRQESAAKKPDDKKEVF
RPLKPAGEVDLTALAKELRAVEDVRPPHKVTDYSSSSEESGTTDEEEEDVEQEGADDSTS
GPEDTRAASSPNLSNGETESVKTMIVHDDVESEPAMTPSKEGTLIVRQTQSASSTLQKHK
SSSSFTPFIDPRLLQISPSSGTTVTSVVGFSCDGLRPEAIRQDPTRKGSVVNVNPTNTRP
QSDTPEIRKYKKRFNSEILCAALWGVNLLVGTESGLMLLDRSGQGKVYPLISRRRFQQMD
VLEGLNVLVTISGKKDKLRVYYLSWLRNKILHNDPEVEKKQGWTTVGDLEGCVHYKVVKY
ERIKFLVIALKSSVEVYAWAPKPYHKFMAFKSFGELLHKPLLVDLTVEEGQRLKVIYGSC
AGFHAVDVDSGSVYDIYLPTHIQCSIKPHAIIILPNTDGMELLVCYEDEGVYVNTYGRIT
KDVVLQWGEMPTSVAYIRSNQTMGWGEKAIEIRSVETGHLDGVFMHKRAQRLKFLCERND
KVFFASVRSGGSSQVYFMTLGRTSLLSW

Chromosome 1
Length
Position(start - end)
123481
39901230 - 40024712
Orient to Chromosome plus
Link Location : (1:39901230-40024712)
/

Detail Map


 

Report

Polymorphisms Report

Target Strain  MSMv4  JF1v3  KJRv1  SWNv1  CHDv1  NJLv1  BLG2v1  HMIv1  BFMv1  PGN2v1
Gene Symbol (Gene ID) Map4k4 (ENSMUSG00000026074)
Transcript ID ENSMUST00000195860
Reports
substitution
cSNPs11
Insertion79
Deletion118
SNPs
-1kb
5'UTR
CDS
3'UTR
INTRON
+1kb
Insertions
-1kb
5'UTR
CDS
3'UTR
INTRON
+1kb
Deletions
-1kb
5'UTR
CDS
3'UTR
INTRON
+1kb
coding sequence substitutions
premature termination by the nucleotide substitution0
synonymous num10
non-synonymous num1
synonymous substitutions 39962219 (p.Val55Val), 39962225 (p.Asp57Asp), 39980595 (p.His151His), 39986727 (p.Gln292Gln), 40003906 (p.Gln640Gln), 40004869 (p.Gly688Gly), 40009813 (p.Glu831Glu), 40017165 (p.Gly1003Gly), 40022800 (p.Phe1143Phe), 40022854 (p.His1161His),
non-synonymous substitutions 40003829 (p.Pro615Ser),
B6 transcript
(ENSMUST00000195860)
MANDSPAKSLVDIDLSSLRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE
DEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDDQLWLVMEFCGAGSITDLVKNT
KGNTLKEDWIAYISREILRGLAHLHIHHVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDR
TVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDLWSCGITAIEMAEGAPPLCDMHPMR
ALFLIPRNPPPRLKSKKWSKKFFSFIEGCLVKNYMQRPSTEQLLKHPFIRDQPNERQVRI
QLKDHIDRTRKKRGEKDETEYEYSGSEEEEEEVPEQEGEPSSIVNVPGESTLRRDFLRLQ
QENKERSEALRRQQLLQEQQLREQEEYKRQLLAERQKRIEQQKEQRRRLEEQQRREREAR
RQQEREQRRREQEEKRRLEELERRRKEEEERRRAEEEKRRVEREQEYIRRQLEEEQRHLE
ILQQQLLQEQAMLLHDHRRPHAQQQPPPPQQQDRSKPSFHAPEPKPHYDPADRAREVEDR
FRKTNHSSPEAQAKQTGRGLEPPVPSRSESFSNGNSESVHPALQRPAEPQVQWSHLASLK
NNVSPVSRSHSFSDPSPKFAHHHLRSQDPCPPSRSEGLSQSSDSKSEVPEPTQKAWSRSD
SDEVPPRVPVRTTSRSPVLSRRDSPLQGGGQQNSQAGQRNSTSSIEPRLLWERVEKLVPR
PGSGSSSGSSNSGSQPGSHPGSQSGSGERFRVRSSSKSEGSPSPRQESAAKKPDDKKEVF
RPLKPAGEVDLTALAKELRAVEDVRPPHKVTDYSSSSEESGTTDEEEEDVEQEGADDSTS
GPEDTRAASSPNLSNGETESVKTMIVHDDVESEPAMTPSKEGTLIVRQTQSASSTLQKHK
SSSSFTPFIDPRLLQISPSSGTTVTSVVGFSCDGLRPEAIRQDPTRKGSVVNVNPTNTRP
QSDTPEIRKYKKRFNSEILCAALWGVNLLVGTESGLMLLDRSGQGKVYPLISRRRFQQMD
VLEGLNVLVTISGKKDKLRVYYLSWLRNKILHNDPEVEKKQGWTTVGDLEGCVHYKVVKY
ERIKFLVIALKSSVEVYAWAPKPYHKFMAFKSFGELLHKPLLVDLTVEEGQRLKVIYGSC
AGFHAVDVDSGSVYDIYLPTHIQCSIKPHAIIILPNTDGMELLVCYEDEGVYVNTYGRIT
KDVVLQWGEMPTSVAYIRSNQTMGWGEKAIEIRSVETGHLDGVFMHKRAQRLKFLCERND
KVFFASVRSGGSSQVYFMTLGRTSLLSW*
MSMv4 transcript
MANDSPAKSLVDIDLSSLRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE
DEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDDQLWLVMEFCGAGSITDLVKNT
KGNTLKEDWIAYISREILRGLAHLHIHHVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDR
TVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDLWSCGITAIEMAEGAPPLCDMHPMR
ALFLIPRNPPPRLKSKKWSKKFFSFIEGCLVKNYMQRPSTEQLLKHPFIRDQPNERQVRI
QLKDHIDRTRKKRGEKDETEYEYSGSEEEEEEVPEQEGEPSSIVNVPGESTLRRDFLRLQ
QENKERSEALRRQQLLQEQQLREQEEYKRQLLAERQKRIEQQKEQRRRLEEQQRREREAR
RQQEREQRRREQEEKRRLEELERRRKEEEERRRAEEEKRRVEREQEYIRRQLEEEQRHLE
ILQQQLLQEQAMLLHDHRRPHAQQQPPPPQQQDRSKPSFHAPEPKPHYDPADRAREVEDR
FRKTNHSSPEAQAKQTGRGLEPPVPSRSESFSNGNSESVHPALQRPAEPQVQWSHLASLK
NNVSPVSRSHSFSDSSPKFAHHHLRSQDPCPPSRSEGLSQSSDSKSEVPEPTQKAWSRSD
SDEVPPRVPVRTTSRSPVLSRRDSPLQGGGQQNSQAGQRNSTSSIEPRLLWERVEKLVPR
PGSGSSSGSSNSGSQPGSHPGSQSGSGERFRVRSSSKSEGSPSPRQESAAKKPDDKKEVF
RPLKPAGEVDLTALAKELRAVEDVRPPHKVTDYSSSSEESGTTDEEEEDVEQEGADDSTS
GPEDTRAASSPNLSNGETESVKTMIVHDDVESEPAMTPSKEGTLIVRQTQSASSTLQKHK
SSSSFTPFIDPRLLQISPSSGTTVTSVVGFSCDGLRPEAIRQDPTRKGSVVNVNPTNTRP
QSDTPEIRKYKKRFNSEILCAALWGVNLLVGTESGLMLLDRSGQGKVYPLISRRRFQQMD
VLEGLNVLVTISGKKDKLRVYYLSWLRNKILHNDPEVEKKQGWTTVGDLEGCVHYKVVKY
ERIKFLVIALKSSVEVYAWAPKPYHKFMAFKSFGELLHKPLLVDLTVEEGQRLKVIYGSC
AGFHAVDVDSGSVYDIYLPTHIQCSIKPHAIIILPNTDGMELLVCYEDEGVYVNTYGRIT
KDVVLQWGEMPTSVAYIRSNQTMGWGEKAIEIRSVETGHLDGVFMHKRAQRLKFLCERND
KVFFASVRSGGSSQVYFMTLGRTSLLSW*
homology99.92 (1289 / 1289)

Exon Detail Report

Target Strain  MSMv4  JF1v3  KJRv1  SWNv1  CHDv1  NJLv1  BLG2v1  HMIv1  BFMv1  PGN2v1
Gene Symbol (Gene ID) Map4k4 (ENSMUSG00000026074)
Transcript ID ENSMUST00000195860
No. Exon / Intron Start End Start Phase End Phase Length Sequence
5' upstream sequence
..........CTGCCTAGCTGACTTGCTGTGGCATGCTGGAAGAAGCCTGTTTGGTGACC
CGTGGTGATCTCCATCCAGGTACTGTCAGGGTTTTAGATCCCGAGCAGAGGGCTCGCCCG
TCCGCCCTCCCTCCCATGGGCCAAACTGGCTCGGGGAACACAGCAGCGAGCAATCACAGC
GACTGTTTTGGATTCTCCCGGACGGTCAAGTGATGCTCAGCGAATCCTCCAGCAGCAACC
AAGCCACAAACTGAGACAGGAAAGGAGAAAGGAGAGGAACACCCCTTGGGGGGTAAAAAG
GAAACGAGGGTCTACGGGACCGACCGGCCGTAGGCGGCGGAGGGGTCCGAGGCCCGACCC
CGGCGCGTCCTGGCACACCCTCTCCCGGGCGAGCGGCGCGGGTGGGGTGTCCACGGGGCC
GCCGGGGCGCTCCGAGTCCTTCATTCATTGTTAGCGGAGGCTGGGGTGTTCCGCCGCGCC
CCGCACTTCCTCCGGGAAGGCCCCGAGGGCTCCCGGCCCCACCCCGGGCCGGGCCACCAT
CCGCGGAGGGCCCGCCGCCCGGCCATTGTTCGAGCCCCACCCCTGCTGAATATTCACGCG
GGCGGGCGGCGAGCGAGCGAGGGCGAGGGCCGGGTTCCGCCCGCTCTCCCGGCGGAGGGG
GCGGGGGAGTCGCTCGCCCCTCCTCAGCGGCGCCGGTCGGTGCCCCGCGTCCCCGCCCCC
GCCCCCGCCTCCCGCGGCATCTTTGTCTCGCGGCCTCGCGCTCGCTCGCTCGCCGCGCTC
TCCGGCCCCAGCTCCGGGCCGCTCGTGCAGGCGCGCGCGCGCGGGGCGCCGGGGCCTGAG
GCGGCGGGCGACGCCCGGGGGGCGGGTGGGGGCCGAGGGAGGACCGCCAAGCCATGGTGT
GAGCTCCGCGGCCAGCGCTCGCCGCGCCGCGCTCCGCTCCGACCGGACGACAAGCCGCCC
GGGCGGCGGCGGCCTGCCCGTGCGGCCCGAGCCCCGGCGCCGCCGAGCCC
1 EXON 1 39901179 39901286 - 0 108
CTGCCCGTCTCTCGCTCTCTCGCCCGCTCCCGGAGCGGCGACCCGGGGAAGATGGCGAAC
GACTCTCCCGCGAAGAGCCTGGTGGACATTGACCTGTCGTCCCTGCGG
INTRON 1 - 2 39901287 39901508 222
GTGAGTGCGGCCGCGCCCTGCGCGC..........TAACCTCCCCCTCCTCTCTCTCCAG
2 EXON 2 39901509 39901574 0 0 66
GACCCTGCTGGGATTTTTGAGCTGGTGGAAGTGGTTGGAAATGGCACCTATGGACAAGTC
TATAAG
INTRON 2 - 3 39901575 39962177 60603
GTCGGTGTGGGGCGCCTTTGTTCCC..........CAGTCTTTGTTTTCTGTGTCTCCAG
3 EXON 3 39962178 39962234 0 0 57
GGTCGACATGTTAAAACGGGTCAGCTGGCCGCCATCAAGGTCATGGATGTCACCGAG
INTRON 3 - 4 39962235 39973926 11692
GTAAGGCTGGACCGCACTTGTTGAT..........CATGTTTTGTTACTTTTTTCCTAAG
4 EXON 4 39973927 39974052 0 0 126
GATGAAGAGGAAGAAATCAAACTGGAGATAAATATGCTGAAGAAGTATTCTCATCATCGA
AATATTGCCACGTACTATGGTGCTTTCATTAAGAAGAGCCCTCCAGGACATGATGACCAA
CTCTGG
INTRON 4 - 5 39974053 39976706 2654
GTAGGTAGATATGTGCAAGCCTTTG..........ACAACATGTCTTGTCTGCCTTGTAG
5 EXON 5 39976707 39976817 0 0 111
CTTGTTATGGAGTTTTGTGGGGCTGGGTCCATCACAGACCTTGTGAAGAACACCAAAGGG
AACACTCTCAAAGAAGACTGGATTGCTTACATCTCCAGGGAAATCCTCAGG
INTRON 5 - 6 39976818 39980559 3742
GTAAGGAAAGCAGGAGCAACCTGTG..........GACTCAAATCTGCTTTTCTTTTCAG
6 EXON 6 39980560 39980650 0 1 91
GGATTGGCACATCTCCATATTCACCACGTTATTCATCGAGATATCAAGGGCCAAAATGTG
CTGCTGACCGAGAATGCTGAGGTGAAACTTG
INTRON 6 - 7 39980651 39983138 2488
GTAGGTGGCCGGCCGGTGTGTGCCT..........CTTCTTCTTGCTTTTTGTTCCGTAG
7 EXON 7 39983139 39983269 1 0 131
TTGATTTTGGTGTAAGCGCTCAGCTGGACAGGACGGTTGGACGGAGAAATACGTTCATAG
GCACACCCTACTGGATGGCTCCAGAGGTCATCGCCTGTGATGAGAACCCAGACGCCACTT
ACGACTACAGA
INTRON 7 - 8 39983270 39983882 613
GTAAGAACACCCACCCCCTTGCCGG..........GGAATATTCTCTTTTGTTTTTGCAG
8 EXON 8 39983883 39983937 0 1 55
AGTGACCTCTGGTCCTGTGGCATCACAGCCATCGAGATGGCTGAAGGGGCCCCCC
INTRON 8 - 9 39983938 39985181 1244
GTGAGTATCTTCCTTCCTTCTGAGC..........CTGACACCGCCATCTCCTTTCCCAG
9 EXON 9 39985182 39985260 1 2 79
CTCTCTGTGACATGCATCCAATGAGAGCGCTGTTTCTCATCCCCAGAAACCCTCCTCCCA
GGCTGAAGTCAAAAAAATG
INTRON 9 - 10 39985261 39986624 1364
GTAAGCCCCACCTCCCCCTCCCTTC..........CAATATGTTTCACTTTCTCTTAAAG
10 EXON 10 39986625 39986800 2 1 176
GTCAAAGAAATTTTTCAGCTTTATAGAAGGCTGTCTGGTGAAGAATTACATGCAGCGGCC
CTCTACAGAGCAACTTTTAAAACACCCTTTCATAAGGGATCAACCCAATGAAAGGCAGGT
TCGAATCCAGCTTAAGGATCACATAGACCGGACCAGAAAGAAGAGAGGCGAGAAAG
INTRON 10 - 11 39986801 39988969 2169
GTATGAAGGCTCCTTTAAGTTTGCC..........TGTTTCTCTCGGCCTTGTTTTTCAG
11 EXON 11 39988970 39989042 1 2 73
ATGAGACGGAGTACGAGTACAGCGGGAGCGAGGAGGAGGAGGAGGAAGTGCCTGAGCAGG
AGGGAGAGCCAAG
INTRON 11 - 12 39989043 39990088 1046
GTACAGACGGCAGCCAGCTCAGGCT..........CCCTGACAGACCCTATCCCCTGCAG
12 EXON 12 39990089 39990299 2 0 211
TTCCATCGTCAATGTGCCTGGAGAGTCAACTCTGCGACGTGATTTCCTGAGACTGCAGCA
GGAGAACAAGGAGCGGTCTGAGGCTCTGCGGAGACAGCAGCTTCTGCAGGAGCAGCAGCT
CCGGGAGCAGGAGGAGTATAAGAGGCAGCTGCTGGCTGAGAGGCAGAAGCGGATTGAACA
GCAGAAAGAACAGAGGAGGCGGCTGGAAGAG
INTRON 12 - 13 39990300 39997020 6721
GTAGAAAAGAGAAGTTCTGTGGGTT..........TAACTACACAGTTCTCCTTCTGCAG
13 EXON 13 39997021 39997182 0 0 162
CAACAAAGAAGAGAACGGGAAGCCAGGAGGCAGCAGGAGCGTGAGCAGCGGCGGCGTGAA
CAAGAGGAGAAGAGGCGTCTCGAGGAACTGGAAAGGCGGCGTAAAGAAGAGGAAGAGAGG
AGACGGGCAGAAGAGGAGAAGAGGAGAGTGGAGAGGGAACAG
INTRON 13 - 14 39997183 39999887 2705
GTGAGCTTTCAAGAATGTTGACCCA..........CTGCTGGGTCATTTCTGTGTGACAG
14 EXON 14 39999888 39999974 0 0 87
GAGTACATCAGGCGGCAGCTAGAGGAGGAGCAGCGGCACCTGGAGATCCTGCAGCAGCAG
CTGCTCCAGGAGCAGGCCATGTTACTG
INTRON 14 - 15 39999975 40000623 649
GTAACGCCCCGTCTCTGTCCCGTTC..........ACAAGCATATCTCCTGTCTCTACAG
15 EXON 15 40000624 40000749 0 0 126
CACGACCACAGGAGGCCGCACGCACAGCAGCAGCCGCCGCCCCCGCAGCAGCAGGACAGG
AGCAAACCGAGCTTTCATGCTCCAGAGCCCAAGCCTCACTATGACCCTGCTGACAGAGCT
CGGGAG
INTRON 15 - 16 40000750 40001429 680
GTACCTGCTTTCCCTCTTGCTTACA..........CGTGTCTTCTAATTCTCTGACGCAG
16 EXON 16 40001430 40001591 0 0 162
GTGGAAGATAGATTTAGAAAGACTAACCACAGCTCCCCTGAGGCCCAGGCTAAGCAAACG
GGCAGAGGACTGGAGCCACCCGTGCCTTCCCGGTCAGAGTCTTTTTCCAATGGCAACTCC
GAGTCTGTGCACCCTGCCCTGCAGAGACCAGCGGAGCCACAG
INTRON 16 - 17 40001592 40003756 2165
GTAGCAGCAGTAGCTCCCTGTGCCA..........GTTTTGTGTTTTGTTTTCTTGTAAG
17 EXON 17 40003757 40003987 0 0 231
GTACAGTGGTCCCACCTGGCATCTCTCAAGAACAATGTCTCCCCTGTCTCGAGATCCCAT
TCCTTCAGTGACTCTTCTCCCAAATTCGCACACCACCATCTCCGCTCTCAGGACCCATGT
CCACCTTCCCGCAGTGAGGGGCTCAGTCAAAGCTCTGACTCTAAGTCGGAGGTGCCCGAG
CCCACCCAAAAGGCTTGGTCTAGATCAGACAGTGACGAGGTGCCTCCAAGG
INTRON 17 - 18 40003988 40004806 819
GTAAGGACAGACAGACAGACGCGCT..........TAACTGCTGTGTTTCCTACCTAAAG
18 EXON 18 40004807 40004913 0 2 107
GTTCCCGTGAGAACGACCTCTCGTTCCCCTGTCCTCTCCCGTCGGGATTCCCCACTGCAG
GGTGGTGGACAGCAGAATAGCCAAGCAGGACAGAGAAATTCCACCAG
INTRON 18 - 19 40004914 40006670 1757
GTAAAAAAAGAGAACTGACAGGAGG..........ACACCGTTCTCTCCTTTTCTAACAG
19 EXON 19 40006671 40006822 2 1 152
CAGTATTGAGCCCCGGCTTCTTTGGGAGAGAGTGGAAAAGCTGGTCCCCAGGCCAGGCAG
TGGCAGCTCTTCAGGGTCCAGCAACTCAGGATCCCAGCCTGGCTCCCATCCTGGGTCTCA
GAGCGGCTCCGGTGAACGCTTCAGAGTGAGAT
INTRON 19 - 20 40006823 40007432 610
GTAGGCTATCTCTCCTACACACTTT..........TTTTTGTCTCTCCTGAACGTACCAG
20 EXON 20 40007433 40007530 1 0 98
CATCATCCAAGTCTGAAGGTTCTCCATCGCCACGCCAGGAAAGTGCAGCCAAAAAGCCTG
ACGATAAGAAAGAAGTATTCCGGCCTCTCAAGCCTGCG
INTRON 20 - 21 40007531 40008330 800
GTAAGTACTGTGTAAAATCACTTAG..........TCCATGGAATCGTCGTGTCCTGAAG
21 EXON 21 40008331 40008339 0 0 9
GGAGAAGTG
INTRON 21 - 22 40008340 40009687 1348
GTAAGCCCGCATCCCTCCCTCCCTC..........CTTCCTTTTCCTTCCTGTGTCTTAG
22 EXON 22 40009688 40009863 0 2 176
GACTTGACTGCGTTGGCCAAAGAGCTTCGAGCAGTGGAAGATGTTCGGCCACCTCACAAA
GTAACAGACTACTCATCCTCCAGTGAGGAGTCTGGGACCACAGATGAGGAGGAGGAGGAC
GTGGAGCAGGAGGGGGCTGATGATTCTACCTCGGGACCAGAAGACACCAGAGCAGC
INTRON 22 - 23 40009864 40010556 693
GTTAGTGCTTGCTGGGCTCAAGAGA..........TGACTTGCAGATCTTGTCTCTTCAG
23 EXON 23 40010557 40010677 2 0 121
GTCATCTCCGAACCTGAGCAACGGTGAAACAGAATCTGTGAAAACAATGATCGTTCATGA
TGATGTAGAAAGTGAGCCAGCCATGACCCCGTCCAAGGAGGGCACCCTCATCGTCCGCCA
G
INTRON 23 - 24 40010678 40014105 3428
GTACCGGAGCCTCCTCTCCTGTTGT..........AATGAAATTGAAATTTACATTTCAG
24 EXON 24 40014106 40014223 0 1 118
ACTCAGTCCGCTAGTAGCACACTCCAGAAACACAAATCTTCCTCCTCCTTTACACCTTTT
ATAGACCCCAGGTTACTACAGATCTCTCCATCTAGTGGGACGACAGTGACTTCCGTGG
INTRON 24 - 25 40014224 40014526 303
GTAAGTACAGCAGCGCCAAGGAGAG..........GAGTCTTCACTGCACTGTGTTTCAG
25 EXON 25 40014527 40014697 1 1 171
TGGGATTTTCCTGTGATGGGCTGAGACCAGAAGCCATAAGGCAAGATCCTACTCGGAAAG
GCTCAGTGGTCAATGTGAACCCCACGAACACTAGGCCACAGAGTGATACCCCCGAGATTC
GTAAATACAAGAAGAGATTTAACTCAGAGATCCTGTGTGCTGCCTTATGGG
INTRON 25 - 26 40014698 40017109 2412
GTAGGTACCTCACTGCTGTCGGGTG..........TAGGCCTTTCTGTGTTTTTGAACAG
26 EXON 26 40017110 40017253 1 1 144
GAGTGAACTTGCTGGTTGGTACAGAGAGCGGTCTGATGCTCTTGGACAGAAGTGGTCAAG
GGAAAGTATACCCTCTGATCAGCCGAAGACGGTTCCAGCAAATGGATGTGCTCGAAGGCC
TAAATGTCCTGGTGACAATATCTG
INTRON 26 - 27 40017254 40019543 2290
GTGAGTGTTCTTTAAAGCAGAATCA..........AAAATACTTCTGTTTATCTTGTTAG
27 EXON 27 40019544 40019678 1 1 135
GCAAAAAGGATAAGTTACGTGTCTACTATTTATCCTGGCTAAGAAATAAGATTCTTCATA
ATGATCCAGAGGTTGAGAAGAAGCAGGGGTGGACCACTGTGGGCGACTTGGAAGGGTGCG
TGCACTATAAAGTCG
INTRON 27 - 28 40019679 40021083 1405
GTGAGTGCTCCGGGGGGCCTTGCTC..........CTCTTGCTTTTTATGTTTGTTTCAG
28 EXON 28 40021084 40021184 1 0 101
TAAAATATGAAAGAATCAAGTTTCTGGTAATTGCTTTGAAGAGTTCTGTGGAAGTCTATG
CATGGGCACCGAAGCCATATCACAAATTTATGGCCTTTAAG
INTRON 28 - 29 40021185 40022704 1520
GTAAAACTGCCAGTTTTAAGTTGGC..........GCTTCTGTCTTGATTCCCTCTGTAG
29 EXON 29 40022705 40022854 0 0 150
TCATTTGGAGAACTGCTACATAAGCCATTACTGGTGGATCTCACTGTGGAGGAAGGCCAG
AGGTTGAAAGTGATCTATGGATCCTGTGCGGGATTTCATGCTGTTGATGTGGATTCAGGC
TCAGTCTATGACATTTATCTACCAACACAC
INTRON 29 - 30 40022855 40023359 505
GTAAGAAAGAACCCACACTCTATGG..........CTGCTTCCCTGTTCCTGTTCTCTAG
30 EXON 30 40023360 40023519 0 1 160
ATTCAGTGTAGCATCAAACCCCATGCAATCATTATCCTCCCCAACACGGATGGGATGGAG
CTGCTGGTGTGCTACGAAGACGAGGGGGTTTACGTTAACACGTACGGAAGGATCACCAAG
GACGTGGTTCTGCAGTGGGGAGAGATGCCGACATCTGTAG
INTRON 30 - 31 40023520 40024309 790
GTATGACACGTCGTGACGAGGCTTC..........CTCTCTCTCTCTCTCTCTCTCAAAG
31 EXON 31 40024310 40024449 1 0 140
CATATATCCGGTCGAATCAGACAATGGGCTGGGGAGAGAAGGCAATAGAGATACGATCTG
TGGAAACTGGTCACTTGGATGGTGTATTTATGCACAAAAGGGCTCAGAGACTAAAGTTCC
TGTGTGAACGCAATGACAAG
INTRON 31 - 32 40024450 40024628 179
GTAAAGCTCCCTTATGGCGTCTGGG..........ACTGTGTCCTCTCATTGTGTTGCAG
32 EXON 32 40024629 40024754 0 - 126
GTGTTCTTTGCCTCCGTCCGCTCTGGTGGCAGCAGCCAGGTCTATTTCATGACCTTAGGC
AGGACTTCTCTTCTGAGCTGGTAGAGGCAGTGTGAGCTGGGATCACTGACCTCTGGAGTC
GGCAAG
3' upstream sequence
ACCCTGAGCGAGACCTTGGAATTCCTTGCAACTGGAGCTCAGAGCTGTGCTGGTGCAGCC
AGGACAGCTGTCTGCAGGCCACCTGCGCGTCGCATCGGGTCGGGTCGGGCCCTCTCCCCT
CCCTCCTACACTTTTTGCCAGTTTATTCCCATTCTCTCCTTTTCCTTTCTCAAATAAATC
AAGGCTGCGTTGCAGCTGGTGCTGTCTGGACTCCACCATCGGTGCTAGGAGTGCTTGGGA
ATGGACTCAGACCGGGAAGGAAGAGCGAGCGAGCAAGCGCTGCGCCTTCCCTGCAGCTCC
AGGAGGCCGTCTCCGAGCGAGCGAGCGAGCGAGCGACTGTCCTATGGGTGTCTGAAGGGT
GTGATGAGCGCACCGTCAGACTTTGGCAGTGGGCACAAAGAAGTGAAAAGTGGGCGTAAG
AAGCAGCTTGCAGAAGCAGAGAACAGATTTAATATAGTAACATTAACAATGTATTTAATT
GACATTTCTCTTTTTGTAATGTGACAGTATGTGGACAGAGAAGAAGGTGCAGGTTTAAGA
AGTTAATATTTATAAAATGTGAAAGACACAGTTACTAGGATACCTTTTTTTTGTGGGTGG
GGCTTAGGGTGGGGTGGGGTGGGTTAAAGGGTCCCATTTTGTTTCTTTGAAAGTTTTTTG
GAGGGGGTTGTCCTGGCCAAGAACTCAGTCATTTTTCTGTGTACCAAGTTTTGCCTAAAT
TGTGCAGGTGGTTCTTAAAAAAGAAAGAAAAGGAAAAGAAAAGTGTGTGTCTTGTTGGAG
GGCCAGAAGTTTGTCCTGTGACAGTATTAGCCCGGCCTCGGCTACAGGTTTAAAGTCTGT
TAGGCCTAAGTGCAGCTCCCCGTGGCCTGCACACACCGTAGGAGAAGGTCAGCTTTCCTG
TGGGGTTTTGTTTCATTTTGTTTTGTTTTTTGCCTACCTCACTGTTTTTAATGCATTGAG
AGGTGACTTAGTTTATGGTTTTGGCAGAAAACATTAATGT..........

Sequence Detail Report

Gene Symbol (Gene ID) Map4k4 (ENSMUSG00000026074)
Transcript ID ENSMUST00000195860
SNP Information
Strain :
Sequence Retrieve :
Exon translate :
CDS Start ( 1 ) - End ( 1289 )
-
Strand : forward reverse
Show sequence : nucleotide amino acid
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