VariantTable
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name
Cspp1 (ENSMUSG00000056763)
type
gene
link
VEGA
Ensembl
MGI
xref
definition
locus_tag
: Cspp1
note
: centrosome and spindle pole associated protein 1 [Source:MGI Symbol;Acc:MGI:2681832]
name
Cspp1 (ENSMUSG00000056763)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000071087
name
Cspp1 (ENSMUSG00000056763)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000117415
name
Cspp1 (ENSMUSG00000056763)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000118263
name
Cspp1 (ENSMUSG00000056763)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000122156
name
Cspp1 (ENSMUSG00000056763)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000119714
name
Cspp1 (ENSMUSG00000056763)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000155974
name
Cspp1 (ENSMUSG00000056763)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000186294
name
Cspp1 (ENSMUSG00000056763)
type
mRNA
link
VEGA
Ensembl
MGI
xref
definition
note
: transcript_id=ENSMUST00000149214
name
Cspp1 (ENSMUSG00000056763)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
CCDS:
CCDS35511.1
Uniprot/SWISSPROT:
B2RX88
RefSeq_peptide:
NP_080769
RefSeq_mRNA:
NM_026493.3
RefSeq_mRNA_predicted:
XM_006495483
RefSeq_mRNA_predicted:
XM_006495484
RefSeq_peptide_predicted:
XP_006495542.2
RefSeq_peptide_predicted:
XP_006495545.1
RefSeq_peptide_predicted:
XP_006495546.1
RefSeq_peptide_predicted:
XP_006495547.1
RefSeq_peptide_predicted:
XP_006495549.1
Vega_transcript:
Cspp1-004
Vega_transcript:
OTTMUST00000067846
UCSC:uc007ahi.1
GO:
GO:0000922
GO:
GO:0000922
GO:
GO:0005515
GO:
GO:0005515
GO:
GO:0005654
GO:
GO:0005654
GO:
GO:0005737
GO:
GO:0005813
GO:
GO:0005813
GO:
GO:0005819
GO:
GO:0005819
GO:
GO:0005874
GO:
GO:0032467
GO:
GO:0032467
GO:
GO:0051781
GO:
GO:0051781
MGI_trans_name:
Cspp1-004
Vega_translation:
178694
Vega_translation:
OTTMUSP00000034200
goslim_goa:
GO:0003674
goslim_goa:
GO:0005575
goslim_goa:
GO:0005622
goslim_goa:
GO:0005623
goslim_goa:
GO:0005737
OTTP:
OTTMUSP00000034200
OTTT:
OTTMUST00000067846
UniParc:
UPI0000F0887C
definition
note
: transcript_id=ENSMUST00000071087
protein_id
: ENSMUSP00000068804
translation
: MADSLDEFIEEQKAKLAKDKAELESDPPYMEMKGKASEKLSENSKILISMAKENIPPSSQQQPKGPLGIEYGLSLPLGEDYEQKKHKLKEELRQDYRRYLTQKNFLSTGETDPSTLGVSLPIDERLSAKERLKLERNREYNQFLRGKAESTEKVRQVEKNIEPKSQRNKNPISQGKSDLPLQIQTAYTHSEGPWLSRQEEGLYRQLDGEIELRSRRPLKQTKEEVGISGAEHPSLSGSAGVPERRARRANGERVLDRQHCRADRDPGVSEDMDERFRFESDFDRRLLRVYTNGRPHGSRRGYVDGDDVPEEPNTQISAAENKSVHCNGPPRSADLDITSPFAGMLFGGEDRELTKRRKEKYRQELLEQIAEQQKKKRREKDLAFGITTSGVQDPEKSPDRLKQFSLTPRHFEEMPPERPRVAFQTPPPPFSAPSSPSVPPVHSAPSHNEDLHSGLGSTLGELAHPRVLPVPLNPPPPPLLAPPASNYRTPYDDAYYFYGARNTLDPNIVYYGSGMIGGQPAPHVSAPVTHQVAPPAVNTVGQNEQKVLSDGLRNSGLVFEDKPKPSTQSLQSYQEALQEQIREREARRKKERLEKEEYEAKLEAEMRIYNPWGKGGGGAPLRDAKGNLITDLNRMHRQNIDAYHNPDARTYEDKRAVVSIDQNLATSNAENLEDSANKNSGPLQTQSSPFARGNTFGEPLSELQIKQQELYKNFLRFQIEEKRQREEAEREKLRVAEEKEEKRLAEQRARIQQEYEEEQERRREKEEEQRLKNEELIRLAEERRKEAERKKKEEEEKHNLQLQHYYERENIIGDETKHLRQPSPVVPALQNKIASKLQRPPSVDTIISSFIHESSMSRAQSPPVPARKNQLRAEEEKKNVIMELSEMRKQLRSEERRLQGRLLHLDSDDEIPMRKRERNPMDIFDMARHRVQAPVRRPSPKGLDATTFQNIHDFNELRERDSDTRVDLRLMYPDPPRDHHTLEIQQQALLREQQKRLNRIKMRRDAGADLDTICTDNAQGRRMPRDDTNDFLKNSLLESDSAFIGAYGETYPVIEDNAFPPPSQLPSARERRRNKLKGLDFDSSRLHTPQDGLSLKSISSVNVDQVRMRNEDRMRRLTEQQKKPTNTDDEGSLVDPDDIMRHLSDDGRNSAATEPWLRPGTSESLKRFMAEHLNEEQHKGPGKPGTFTWQGLSAAHA
name
Cspp1 (ENSMUSG00000056763)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
Uniprot/SWISSPROT:
B2RX88
Vega_transcript:
Cspp1-001
Vega_transcript:
OTTMUST00000067775
UCSC:uc007ahh.1
GO:
GO:0000922
GO:
GO:0005515
GO:
GO:0005654
GO:
GO:0005737
GO:
GO:0005813
GO:
GO:0005819
GO:
GO:0005874
GO:
GO:0032467
GO:
GO:0051781
MGI_trans_name:
Cspp1-001
Vega_translation:
178695
Vega_translation:
OTTMUSP00000034157
goslim_goa:
GO:0003674
goslim_goa:
GO:0005575
goslim_goa:
GO:0005622
goslim_goa:
GO:0005623
goslim_goa:
GO:0005737
OTTP:
OTTMUSP00000034157
OTTT:
OTTMUST00000067775
UniParc:
UPI00000E77D0
definition
note
: transcript_id=ENSMUST00000117415
protein_id
: ENSMUSP00000112800
translation
: MADSLDEFIEEQKAKLAKDKAELESDPPYMEMKGKASEKLSENSKILISMAKENIPPSSQQQPKGPLGIEYGLSLPLGEDYEQKKHKLKEELRQDYRRYLTQKNFLSTGETDPSTLGVSLPIDERLSAKERLKLERNREYNQFLRGKAESTEKVRQVEKNIEPKSQRNKNPISQGKSDLPLQIQTAYTHSEGPWLSRQEEGLYRQLDGEIELRSRRPLKQTKEEVGISGAEHPSLSGSAGVPERRARRANGERVLDRQHCRADRDPGVSEDMDERFRFESDFDRRLLRVYTNGRYLHLHFSSLYLLNTGVL
name
Cspp1 (ENSMUSG00000056763)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
Uniprot/SWISSPROT:
B2RX88
Vega_transcript:
Cspp1-003
Vega_transcript:
OTTMUST00000067777
UCSC:uc007ahk.1
GO:
GO:0000922
GO:
GO:0005515
GO:
GO:0005654
GO:
GO:0005737
GO:
GO:0005813
GO:
GO:0005819
GO:
GO:0005874
GO:
GO:0032467
GO:
GO:0051781
MGI_trans_name:
Cspp1-003
Vega_translation:
178696
Vega_translation:
OTTMUSP00000034158
goslim_goa:
GO:0003674
goslim_goa:
GO:0005575
goslim_goa:
GO:0005622
goslim_goa:
GO:0005623
goslim_goa:
GO:0005737
OTTP:
OTTMUSP00000034158
OTTT:
OTTMUST00000067777
UniParc:
UPI00000E77D0
definition
note
: transcript_id=ENSMUST00000118263
protein_id
: ENSMUSP00000112476
translation
: MADSLDEFIEEQKAKLAKDKAELESDPPYMEMKGKASEKLSENSKILISMAKENIPPSSQQQPKGPLGIEYGLSLPLGEDYEQKKHKLKEELRQDYRRYLTQKNFLSTGETDPSTLGVSLPIDERLSAKERLKLERNREYNQFLRGKAESTEKVRQVEKNIEPKSQRNKNPISQGKSDLPLQIQTAYTHSEGPWLSRQEEGLYRQLDGEIELRSRRPLKQTKEEVGISGAEHPSLSGSAGVPERRARRANGERVLDRQHCRADRDPGVSEDMDERFRFESDFDRRLLRVYTNGRYLHLHFSSLYLLNTGVL
name
Cspp1 (ENSMUSG00000056763)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
Uniprot/SWISSPROT:
B2RX88
Vega_transcript:
Cspp1-006
Vega_transcript:
OTTMUST00000067947
UCSC:uc007ahj.1
GO:
GO:0000922
GO:
GO:0005515
GO:
GO:0005654
GO:
GO:0005737
GO:
GO:0005813
GO:
GO:0005819
GO:
GO:0005874
GO:
GO:0032467
GO:
GO:0051781
MGI_trans_name:
Cspp1-006
Vega_translation:
178697
Vega_translation:
OTTMUSP00000034271
goslim_goa:
GO:0003674
goslim_goa:
GO:0005575
goslim_goa:
GO:0005622
goslim_goa:
GO:0005623
goslim_goa:
GO:0005737
OTTP:
OTTMUSP00000034271
OTTT:
OTTMUST00000067947
UniParc:
UPI00000E933F
definition
note
: transcript_id=ENSMUST00000122156
protein_id
: ENSMUSP00000113663
translation
: MADSLDEFIEEQKAKLAKDKAELESDPPYMEMKGKASEKLSENSKILISMAKENIPPSSQQQPKGPLGIEYGLSLPLGEDYEQKKHKLKEELRQDYRRYLTQGITQAKRKKNFLSTGETDPSTLGVSLPIDERLSAKERLKLERNREYNQFLRGKAESTEKVRQVEKNIEPKSQRNKNPISQGKSDLPLQIQTAYTHSEGPWLSRQEEGLYRQLDGEIELRSRRPLKQTKEEVGISGAEHPSLSGSAGVPERRARRANGERVLDRQHCRADRDPGVSEDMDERFRFESDFDRRLLRVYTNGRYLHLHFSSLYLLNTGVL
name
Cspp1 (ENSMUSG00000056763)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
Uniprot/SWISSPROT:
B2RX88
Vega_transcript:
Cspp1-005
Vega_transcript:
OTTMUST00000067946
UCSC:uc007ahl.1
GO:
GO:0000922
GO:
GO:0005515
GO:
GO:0005654
GO:
GO:0005737
GO:
GO:0005813
GO:
GO:0005819
GO:
GO:0005874
GO:
GO:0032467
GO:
GO:0051781
MGI_trans_name:
Cspp1-005
Vega_translation:
178698
Vega_translation:
OTTMUSP00000034270
goslim_goa:
GO:0003674
goslim_goa:
GO:0005575
goslim_goa:
GO:0005622
goslim_goa:
GO:0005623
goslim_goa:
GO:0005737
OTTP:
OTTMUSP00000034270
OTTT:
OTTMUST00000067946
UniParc:
UPI00000E77D0
definition
note
: transcript_id=ENSMUST00000119714
protein_id
: ENSMUSP00000114091
translation
: MADSLDEFIEEQKAKLAKDKAELESDPPYMEMKGKASEKLSENSKILISMAKENIPPSSQQQPKGPLGIEYGLSLPLGEDYEQKKHKLKEELRQDYRRYLTQKNFLSTGETDPSTLGVSLPIDERLSAKERLKLERNREYNQFLRGKAESTEKVRQVEKNIEPKSQRNKNPISQGKSDLPLQIQTAYTHSEGPWLSRQEEGLYRQLDGEIELRSRRPLKQTKEEVGISGAEHPSLSGSAGVPERRARRANGERVLDRQHCRADRDPGVSEDMDERFRFESDFDRRLLRVYTNGRYLHLHFSSLYLLNTGVL
name
Cspp1 (ENSMUSG00000056763)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
Vega_transcript:
Cspp1-008
Vega_transcript:
OTTMUST00000067949
Uniprot/SPTREMBL:
D3Z378
UCSC:uc007ahg.1
EMBL:
AC102570
EMBL:
AC159972
GO:
GO:0000922
GO:
GO:0005654
GO:
GO:0005813
GO:
GO:0005819
GO:
GO:0005874
GO:
GO:0032467
GO:
GO:0051781
MGI_trans_name:
Cspp1-008
Vega_translation:
178699
Vega_translation:
OTTMUSP00000034273
goslim_goa:
GO:0005575
goslim_goa:
GO:0005622
goslim_goa:
GO:0005623
goslim_goa:
GO:0005634
goslim_goa:
GO:0005654
goslim_goa:
GO:0005815
goslim_goa:
GO:0005856
goslim_goa:
GO:0008150
goslim_goa:
GO:0043226
goslim_goa:
GO:0043234
OTTP:
OTTMUSP00000034273
OTTT:
OTTMUST00000067949
UniParc:
UPI000021674A
definition
note
: transcript_id=ENSMUST00000155974
protein_id
: ENSMUSP00000117726
translation
: MADSLDEFIEEQKAKLAKDKAELESDPPYMEMKGKASEKLSENSKILISMAKENIPPSSQQQPKGPLGIEYGLSLPLGEDYEQKKHKLKEELRQDYRRYLTQ
name
Cspp1 (ENSMUSG00000056763)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
Uniprot/SWISSPROT:
B2RX88
RefSeq_peptide_predicted:
XP_006495544.2
RefSeq_peptide_predicted:
XP_011236667.1
Vega_transcript:
Cspp1-017
Vega_transcript:
OTTMUST00000118990
UCSC:uc011wih.1
GO:
GO:0000922
GO:
GO:0005515
GO:
GO:0005654
GO:
GO:0005737
GO:
GO:0005813
GO:
GO:0005819
GO:
GO:0005874
GO:
GO:0032467
GO:
GO:0051781
MGI_trans_name:
Cspp1-017
Vega_translation:
178700
Vega_translation:
OTTMUSP00000066332
goslim_goa:
GO:0003674
goslim_goa:
GO:0005575
goslim_goa:
GO:0005622
goslim_goa:
GO:0005623
goslim_goa:
GO:0005634
goslim_goa:
GO:0005654
goslim_goa:
GO:0005737
goslim_goa:
GO:0005815
goslim_goa:
GO:0005856
goslim_goa:
GO:0008150
goslim_goa:
GO:0043226
goslim_goa:
GO:0043234
OTTP:
OTTMUSP00000066332
OTTT:
OTTMUST00000118990
UniParc:
UPI0001E88EB2
definition
note
: transcript_id=ENSMUST00000186294
protein_id
: ENSMUSP00000139775
translation
: MDLNCYPHLVAGHAHSYLIWRGKASEKLSENSKILISMAKENIPPSSQQQPKGPLGIEYGLSLPLGEDYEQKKHKLKEELRQDYRRYLTQGITQAKRKKNFLSTGETDPSTLGVSLPIDERLSAKERLKLERNREYNQFLRGKAESTEKVRQVEKNIEPKSQRNKNPISQGKSDLPLQIQTAYTHSEGPWLSRQEEGLYRQLDGEIELRSRRPLKQTKEEVGISGAEHPSLSGSAGVPERRARRANGERVLDRQHCRADRDPGVSEDMDERFRFESDFDRRLLRVYTNGRPHGSRRGYVDGDDVPEEPNTQISAAENKSVHCNGPPRSADLDITSPFAGMLFGGEDRELTKRRKEKYRQELLEQIAEQQKKKRREKDLAFGITTSGVQDPEKSPDRLKQFSLTPRHFEEMPPERPRVAFQTPPPPFSAPSSPSVPPVHSAPSHNEDLHSGLGSTLGELAHPRVLPVPLNPPPPPLLAPPASNYRTPYDDAYYFYGARNTLDPNIVYYGSGMIGGQPAPHVSAPVTHQVAPPAVNTVGQNEQKVLSDGLRNSGLVFEDKPKPSTQSLQSYQEALQEQIREREARRKKERLEKEEYEAKLEAEMRIYNPWGKGGGGAPLRDAKGNLISPLQTQSSPFARGNTFGEPLSELQIKQQELYKNFLRFQIEEKRQREEAEREKLRVAEEKEEKRLAEQRARIQQEYEEEQERRREKEEEQRLKNEELIRLAEERRKEAERKKKEEEEKHNLQLQHYYERENIIGDETKHLRQPSPVVPALQNKIASKLQRPPSVDTIISSFIHESSMSRAQSPPVPARKNQLRAEEEKKNVIMELSEMRKQLRSEERRLQGRLLHLDSDDEIPMRKRERNPMDIFDMARHRVQAPVRRPSPKGLDATTFQNIHDFNELRERDSDTRVDLRLMYPDPPRDHHTLEIQQQALLREQQKRLNRIKMRRDAGADLDTICTDNAQGRRMPRDDTNDFLKNSLLESDSAFIGAYGETYPVIEDNAFPPPSQLPSARERRRNKLKGLDFDSSRLHTPQDGLSLKSISSVNVDQVRMRNEDRMRRLTEQQKKPTNTDDEGSLVDPDDIMRHLSDDGRNSAATEPWLRPGTSESLKRFMAEHLNEEQHKGPGKPGTFTWQGLSAAHA
name
Cspp1 (ENSMUSG00000056763)
(Detail)
type
CDS
link
VEGA
Ensembl
MGI
xref
Vega_transcript:
Cspp1-007
Vega_transcript:
OTTMUST00000067948
Uniprot/SPTREMBL:
F6QJJ3
GO:
GO:0000922
GO:
GO:0005654
GO:
GO:0005813
GO:
GO:0005819
GO:
GO:0005874
GO:
GO:0032467
GO:
GO:0051781
MGI_trans_name:
Cspp1-007
Vega_translation:
178701
Vega_translation:
OTTMUSP00000034272
goslim_goa:
GO:0005575
goslim_goa:
GO:0005622
goslim_goa:
GO:0005623
goslim_goa:
GO:0005634
goslim_goa:
GO:0005654
goslim_goa:
GO:0005815
goslim_goa:
GO:0005856
goslim_goa:
GO:0008150
goslim_goa:
GO:0043226
goslim_goa:
GO:0043234
OTTP:
OTTMUSP00000034272
OTTT:
OTTMUST00000067948
UniParc:
UPI000164C592
definition
codon_start
: 3
note
: transcript_id=ENSMUST00000149214
protein_id
: ENSMUSP00000119258
translation
: XNHQEQQPRIEYGLSLPLGEDYEQKKHKLKEELRQDYRRYLTQKNFLSTGETDPSTLGVSLPIDERLSAKERLKLERNREYNQFLRGKAESTEKVRQVEKNIEPKSQRNKNPISQGKSDLPLQIQTAYTHSEGPWLSRQEEGLYRQLDGEIEL
name
type
misc_feature
link
xref
definition
note
: contig AC102570.8 1..194371(-1)
name
Cspp1 (ENSMUSG00000056763)
type
misc_RNA
link
VEGA
Ensembl
MGI
xref
Vega_transcript:
OTTMUST00000067776
Vega_transcript:
OTTMUST00000067776
MGI_trans_name:
Cspp1-002
OTTT:
OTTMUST00000067776
definition
note
: retained_intron
note
: transcript_id=ENSMUST00000143606
name
Cspp1 (ENSMUSG00000056763)
type
misc_RNA
link
VEGA
Ensembl
MGI
xref
Vega_transcript:
OTTMUST00000118987
Vega_transcript:
OTTMUST00000118987
MGI_trans_name:
Cspp1-020
OTTT:
OTTMUST00000118987
definition
note
: retained_intron
note
: transcript_id=ENSMUST00000191360
name
Cspp1 (ENSMUSG00000056763)
type
misc_RNA
link
VEGA
Ensembl
MGI
xref
Vega_transcript:
OTTMUST00000118988
Vega_transcript:
OTTMUST00000118988
MGI_trans_name:
Cspp1-021
OTTT:
OTTMUST00000118988
definition
note
: retained_intron
note
: transcript_id=ENSMUST00000191521
name
Cspp1 (ENSMUSG00000056763)
type
misc_RNA
link
VEGA
Ensembl
MGI
xref
Vega_transcript:
OTTMUST00000118989
Vega_transcript:
OTTMUST00000118989
MGI_trans_name:
Cspp1-022
OTTT:
OTTMUST00000118989
definition
note
: retained_intron
note
: transcript_id=ENSMUST00000190063
name
Cspp1 (ENSMUSG00000056763)
type
misc_RNA
link
VEGA
Ensembl
MGI
xref
Vega_transcript:
OTTMUST00000067950
Vega_transcript:
OTTMUST00000067950
MGI_trans_name:
Cspp1-009
OTTT:
OTTMUST00000067950
definition
note
: retained_intron
note
: transcript_id=ENSMUST00000134716
Location
chromosome :
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
X
(Build: mm10)
view_point (b.p.) :
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Picture width(pt) :
Colors
Annotation:
Gene
mRNA
CDS
genetic markers
Tracks
RefSeq genes :
not show
show
Gene, mRNA, CDS :
not show
show
MSM BAC end pairs :
not show
show
B6N BAC end pairs :
not show
show
MSMv4 :
not show
show
JF1v3 :
not show
show
KJRv1 :
not show
show
SWNv1 :
not show
show
CHDv1 :
not show
show
NJLv1 :
not show
show
BLG2v1 :
not show
show
HMIv1 :
not show
show
BFMv1 :
not show
show
PGNv1 :
not show
show
Click to browse alignment view.
BAC clone ordering.